RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 ALDH6A1Q02252 535 aaKnown RBP7.87□□□□□ -1.15
USP54-203ENST00000418501 HYAL2Q12891 473 aa7.87□□□□□ -1.15
USP54-203ENST00000418501 KCNAB2Q13303 367 aa7.87□□□□□ -1.15
USP54-203ENST00000418501 ZNF267Q14586 743 aaPredicted RBP7.87□□□□□ -1.15
USP54-203ENST00000418501 FRMPD2BQ6IN97 320 aa7.87□□□□□ -1.15
USP54-203ENST00000418501 RORBQ92753 470 aa7.87□□□□□ -1.15
USP54-203ENST00000418501 YIPF4Q9BSR8 244 aa7.87□□□□□ -1.15
USP54-203ENST00000418501 SLC6A13Q9NSD5 602 aa7.87□□□□□ -1.15
USP54-203ENST00000418501 SIRT3Q9NTG7 399 aaPredicted RBP7.87□□□□□ -1.15
USP54-203ENST00000418501 NTMQ9P121 344 aa7.87□□□□□ -1.15
USP54-203ENST00000418501 GMPR2Q9P2T1 348 aaKnown RBP7.87□□□□□ -1.15
USP54-203ENST00000418501 WARS2Q9UGM6 360 aaKnown RBP7.87□□□□□ -1.15
USP54-203ENST00000418501 EFCAB10A6NFE3 127 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 C10orf142B7Z368 130 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 GTPBP1O00178 669 aaKnown RBP7.86□□□□□ -1.15
USP54-203ENST00000418501 BMP7P18075 431 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 IL12BP29460 328 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 XCR1P46094 333 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 OR1D5P58170 312 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 RPS26P62854 115 aaKnown RBP7.86□□□□□ -1.15
USP54-203ENST00000418501 OLR1P78380 273 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 FZD5Q13467 585 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 DSG2Q14126 1118 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 DEFB110Q30KQ9 67 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 DCST2Q5T1A1 773 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 MEDAGQ5VYS4 303 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 FAM181AQ8N9Y4 354 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 OR5L2Q8NGL0 311 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 TRUB1Q8WWH5 349 aaKnown RBP7.86□□□□□ -1.15
USP54-203ENST00000418501 CCDC74AQ96AQ1 378 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 SLC46A1Q96NT5 459 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 RACGAP1Q9H0H5 632 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 CHST8Q9H2A9 424 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 CAPN10Q9HC96 672 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 EXO1Q9UQ84 846 aaKnown RBP7.86□□□□□ -1.15
USP54-203ENST00000418501 SLC35A3Q9Y2D2 325 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 MN1Q10571 1320 aaPredicted RBP7.86□□□□□ -1.15
USP54-203ENST00000418501 OR6C76A6NM76 312 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 FMO6PO60774 539 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 ANKRD34CP0C6C1 535 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 TRHRP34981 398 aaPredicted RBP7.86□□□□□ -1.15
USP54-203ENST00000418501 GRK6P43250 576 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 SERPINB10P48595 397 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 NPRL3Q12980 569 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 C1DQ13901 141 aaKnown RBP7.86□□□□□ -1.15
USP54-203ENST00000418501 PLK5Q496M5 336 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 FLYWCH1Q4VC44 716 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 PARP8Q8N3A8 854 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 D2HGDHQ8N465 521 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 STX19Q8N4C7 294 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 OR4D9Q8NGE8 314 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 CNDP2Q96KP4 475 aaKnown RBP7.86□□□□□ -1.15
USP54-203ENST00000418501 GTPBP2Q9BX10 602 aaKnown RBP7.86□□□□□ -1.15
USP54-203ENST00000418501 TRIM4Q9C037 500 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 LRRN3Q9H3W5 708 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 LHX9Q9NQ69 397 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 KCMF1Q9P0J7 381 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 TESQ9UGI8 421 aaKnown RBP7.86□□□□□ -1.15
USP54-203ENST00000418501 SH3D21A4FU49 640 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 SHISA7A6NL88 538 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 P2RX6O15547 441 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 SNAP29O95721 258 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 IGHEP01854 428 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 CELA2BP08218 269 aaPredicted RBP7.86□□□□□ -1.15
USP54-203ENST00000418501 MSL3P1P0C860 447 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 NELFEP18615 380 aaKnown RBP7.86□□□□□ -1.15
USP54-203ENST00000418501 POU1F1P28069 291 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 HLCSP50747 726 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 CASP9P55211 416 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 YBX1P67809 324 aaKnown RBP7.86□□□□□ -1.15
USP54-203ENST00000418501 PPP2R2BQ00005 443 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 E2F1Q01094 437 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 DYNC1I2Q13409 638 aaKnown RBP7.86□□□□□ -1.15
USP54-203ENST00000418501 EXOC3L2Q2M3D2 409 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 CYP27C1Q4G0S4 372 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 MLIPQ5VWP3 458 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 RNF113BQ8IZP6 322 aaKnown RBP7.86□□□□□ -1.15
USP54-203ENST00000418501 FLVCR1-AS1Q8TAF5 88 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 NUDT8Q8WV74 236 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 MCHR1Q99705 422 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 ORAI3Q9BRQ5 295 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 PNO1Q9NRX1 252 aaKnown RBP7.86□□□□□ -1.15
USP54-203ENST00000418501 UTRNP46939 3433 aa7.86□□□□□ -1.15
USP54-203ENST00000418501 FITM1A5D6W6 292 aa7.85□□□□□ -1.15
USP54-203ENST00000418501 ENO4A6NNW6 628 aa7.85□□□□□ -1.15
USP54-203ENST00000418501 SCDO00767 359 aa7.85□□□□□ -1.15
USP54-203ENST00000418501 RGS10O43665 173 aa7.85□□□□□ -1.15
USP54-203ENST00000418501 HEXBP07686 556 aa7.85□□□□□ -1.15
USP54-203ENST00000418501 CDK4P11802 303 aa7.85□□□□□ -1.15
USP54-203ENST00000418501 CD1CP29017 333 aa7.85□□□□□ -1.15
USP54-203ENST00000418501 RFX3P48380 749 aa7.85□□□□□ -1.15
USP54-203ENST00000418501 ST13P50502 369 aaKnown RBP7.85□□□□□ -1.15
USP54-203ENST00000418501 SMSP52788 366 aa7.85□□□□□ -1.15
USP54-203ENST00000418501 ADARB1P78563 741 aaKnown RBP7.85□□□□□ -1.15
USP54-203ENST00000418501 SQSTM1Q13501 440 aa7.85□□□□□ -1.15
USP54-203ENST00000418501 GPR68Q15743 365 aa7.85□□□□□ -1.15
USP54-203ENST00000418501 NPTX1Q15818 432 aa7.85□□□□□ -1.15
USP54-203ENST00000418501 HLA-BQ31612 363 aa7.85□□□□□ -1.15
USP54-203ENST00000418501 TRIM61Q5EBN2 209 aa7.85□□□□□ -1.15
USP54-203ENST00000418501 PHF19Q5T6S3 580 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms