RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 PGAM1P18669 254 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 S100A1P23297 94 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 DCKP27707 260 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 PIK3R1P27986 724 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 CCND2P30279 289 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 MIPP30301 263 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 SLC6A6P31641 620 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 CDKN1AP38936 164 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 MAGEA12P43365 314 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 RPL14P50914 215 aaKnown RBP2.42□□□□□ -2.02
VPS41-206ENST00000418457 ATP4BP51164 291 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 BCAP31P51572 246 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 PDX1P52945 283 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 LIMK2P53671 638 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 CSE1LP55060 971 aaKnown RBP2.42□□□□□ -2.02
VPS41-206ENST00000418457 TMBIM6P55061 237 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 CDH6P55285 790 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 NME5P56597 212 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 C21orf59P57076 290 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 RPL10AP62906 217 aaKnown RBP2.42□□□□□ -2.02
VPS41-206ENST00000418457 DYNLT1P63172 113 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 CX3CL1P78423 397 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 MRPS22P82650 360 aaKnown RBP2.42□□□□□ -2.02
VPS41-206ENST00000418457 OGDHQ02218 1023 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 RELAQ04206 551 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 SQLEQ14534 574 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 INAQ16352 499 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 PSMD5Q16401 504 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 KYAT1Q16773 422 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 RGS21Q2M5E4 152 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 ZNF699Q32M78 642 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 PTPN20Q4JDL3 420 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 XKR3Q5GH77 459 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 SAMD4BQ5PRF9 694 aaKnown RBP2.42□□□□□ -2.02
VPS41-206ENST00000418457 N4BP2L1Q5TBK1 243 aaPredicted RBP2.42□□□□□ -2.02
VPS41-206ENST00000418457 FKBP1CQ5VVH2 108 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 SEL1L3Q68CR1 1132 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 PRMT9Q6P2P2 845 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 C16orf87Q6PH81 154 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 IYDQ6PHW0 289 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 RBMS3Q6XE24 437 aaKnown RBP2.42□□□□□ -2.02
VPS41-206ENST00000418457 PLPPR4Q7Z2D5 763 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 ZNF329Q86UD4 541 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 ERO1BQ86YB8 467 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 HPS6Q86YV9 775 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 PSTKQ8IV42 348 aaKnown RBP2.42□□□□□ -2.02
VPS41-206ENST00000418457 TTC30BQ8N4P2 665 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 DNAJC22Q8N4W6 341 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 CERS5Q8N5B7 392 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 ANKFN1Q8N957 763 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 TDRD5Q8NAT2 981 aaKnown RBP2.42□□□□□ -2.02
VPS41-206ENST00000418457 OR1J1Q8NGS3 322 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 GIPC3Q8TF64 312 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 CHPT1Q8WUD6 406 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 C17orf50Q8WW18 174 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 TRUB1Q8WWH5 349 aaKnown RBP2.42□□□□□ -2.02
VPS41-206ENST00000418457 FCAMRQ8WWV6 532 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 POP5Q969H6 163 aaKnown RBP2.42□□□□□ -2.02
VPS41-206ENST00000418457 CCDC124Q96CT7 223 aaKnown RBP2.42□□□□□ -2.02
VPS41-206ENST00000418457 CCDC126Q96EE4 140 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 NRBF2Q96F24 287 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 ANKRD36BP1Q96IX9 119 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 DNAJC1Q96KC8 554 aaKnown RBP2.42□□□□□ -2.02
VPS41-206ENST00000418457 CEP170P1Q96L14 293 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 PGLYRP2Q96PD5 576 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 QKIQ96PU8 341 aaKnown RBP eCLIP2.42□□□□□ -2.02
VPS41-206ENST00000418457 SORT1Q99523 831 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 CGREF1Q99674 301 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 BCL7BQ9BQE9 202 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 ADPGKQ9BRR6 497 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 PI4K2AQ9BTU6 479 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 C9orf16Q9BUW7 83 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 CALN1Q9BXU9 219 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 VN1R1Q9GZP7 353 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 IL22Q9GZX6 179 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 ILKAPQ9H0C8 392 aaPredicted RBP2.42□□□□□ -2.02
VPS41-206ENST00000418457 POLR3FQ9H1D9 316 aaPredicted RBP2.42□□□□□ -2.02
VPS41-206ENST00000418457 ARRDC1-AS1Q9H2J1 176 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 SNX25Q9H3E2 840 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 ZNF385DQ9H6B1 395 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 C10orf88Q9H8K7 445 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 COG4Q9H9E3 785 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 COPS7BQ9H9Q2 264 aaPredicted RBP2.42□□□□□ -2.02
VPS41-206ENST00000418457 WDR41Q9HAD4 459 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 CYP3A43Q9HB55 503 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 TRPV5Q9NQA5 729 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 CISHQ9NSE2 258 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 ATAD3AQ9NVI7 634 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 ARMC1Q9NVT9 282 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 ADPRHL2Q9NX46 363 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 ZNF624Q9P2J8 865 aaPredicted RBP2.42□□□□□ -2.02
VPS41-206ENST00000418457 MARCOQ9UEW3 520 aaPredicted RBP2.42□□□□□ -2.02
VPS41-206ENST00000418457 POLLQ9UGP5 575 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 APPL1Q9UKG1 709 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 CCPG1Q9ULG6 757 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 KIAA1217Q5T5P2 1943 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 PARP14Q460N5 1801 aa2.42□□□□□ -2.02
VPS41-206ENST00000418457 ANK1P16157 1881 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 ANKRD31Q8N7Z5 1873 aa2.41□□□□□ -2.02
VPS41-206ENST00000418457 LOC285556D6RIA3 1793 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms