RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 TMEM81Q6P7N7 255 aa13.79□□□□□ -0.2
UBXN4-203ENST00000416538 ANGPTL8Q6UXH0 198 aa13.79□□□□□ -0.2
UBXN4-203ENST00000416538 FRMD7Q6ZUT3 714 aa13.79□□□□□ -0.2
UBXN4-203ENST00000416538 DMRTC2Q8IXT2 367 aaPredicted RBP13.79□□□□□ -0.2
UBXN4-203ENST00000416538 GBP7Q8N8V2 638 aaPredicted RBP13.79□□□□□ -0.2
UBXN4-203ENST00000416538 OR7G2Q8NG99 324 aa13.79□□□□□ -0.2
UBXN4-203ENST00000416538 OR10Q1Q8NGQ4 319 aa13.79□□□□□ -0.2
UBXN4-203ENST00000416538 VSTM2LQ96N03 204 aa13.79□□□□□ -0.2
UBXN4-203ENST00000416538 BTBD9Q96Q07 612 aa13.79□□□□□ -0.2
UBXN4-203ENST00000416538 TIMP4Q99727 224 aa13.79□□□□□ -0.2
UBXN4-203ENST00000416538 L2HGDHQ9H9P8 463 aa13.79□□□□□ -0.2
UBXN4-203ENST00000416538 MCCC2Q9HCC0 563 aa13.79□□□□□ -0.2
UBXN4-203ENST00000416538 KCNJ16Q9NPI9 418 aa13.79□□□□□ -0.2
UBXN4-203ENST00000416538 NMRK1Q9NWW6 199 aa13.79□□□□□ -0.2
UBXN4-203ENST00000416538 B4GALT7Q9UBV7 327 aa13.79□□□□□ -0.2
UBXN4-203ENST00000416538 GPR55Q9Y2T6 319 aaPredicted RBP13.79□□□□□ -0.2
UBXN4-203ENST00000416538 HIVEP1P15822 2718 aa13.78□□□□□ -0.2
UBXN4-203ENST00000416538 GNG14A0A1W2PPG7 69 aa13.78□□□□□ -0.2
UBXN4-203ENST00000416538 SERTM1A2A2V5 107 aa13.78□□□□□ -0.2
UBXN4-203ENST00000416538 FRG2CA6NGY1 282 aa13.78□□□□□ -0.2
UBXN4-203ENST00000416538 CAPN14A8MX76 684 aa13.78□□□□□ -0.2
UBXN4-203ENST00000416538 TO15178 435 aa13.78□□□□□ -0.2
UBXN4-203ENST00000416538 SNX4O95219 450 aa13.78□□□□□ -0.2
UBXN4-203ENST00000416538 MYL2P10916 166 aa13.78□□□□□ -0.2
UBXN4-203ENST00000416538 ELAVL4P26378 380 aaKnown RBP13.78□□□□□ -0.2
UBXN4-203ENST00000416538 PPICP45877 212 aa13.78□□□□□ -0.2
UBXN4-203ENST00000416538 NAGLUP54802 743 aa13.78□□□□□ -0.2
UBXN4-203ENST00000416538 SNTB1Q13884 538 aaKnown RBP13.78□□□□□ -0.2
UBXN4-203ENST00000416538 WIPI1Q5MNZ9 446 aaPredicted RBP13.78□□□□□ -0.2
UBXN4-203ENST00000416538 TIGD3Q6B0B8 471 aa13.78□□□□□ -0.2
UBXN4-203ENST00000416538 POMZP3Q6PJE2 187 aa13.78□□□□□ -0.2
UBXN4-203ENST00000416538 LIX1Q8N485 282 aa13.78□□□□□ -0.2
UBXN4-203ENST00000416538 TNIP2Q8NFZ5 429 aa13.78□□□□□ -0.2
UBXN4-203ENST00000416538 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.78□□□□□ -0.2
UBXN4-203ENST00000416538 TMBIM1Q969X1 311 aa13.78□□□□□ -0.2
UBXN4-203ENST00000416538 HSPBAP1Q96EW2 488 aa13.78□□□□□ -0.2
UBXN4-203ENST00000416538 OSBPL11Q9BXB4 747 aa13.78□□□□□ -0.2
UBXN4-203ENST00000416538 UGT2B28Q9BY64 529 aa13.78□□□□□ -0.2
UBXN4-203ENST00000416538 SHCBP1LQ9BZQ2 653 aa13.78□□□□□ -0.2
UBXN4-203ENST00000416538 PRDM14Q9GZV8 571 aa13.78□□□□□ -0.2
UBXN4-203ENST00000416538 METTL7AQ9H8H3 244 aa13.78□□□□□ -0.2
UBXN4-203ENST00000416538 SERHLQ9NQF3 203 aa13.78□□□□□ -0.2
UBXN4-203ENST00000416538 PFDN4Q9NQP4 134 aa13.78□□□□□ -0.2
UBXN4-203ENST00000416538 SLC35C2Q9NQQ7 365 aa13.78□□□□□ -0.2
UBXN4-203ENST00000416538 SIRT5Q9NXA8 310 aa13.78□□□□□ -0.2
UBXN4-203ENST00000416538 DCDC2Q9UHG0 476 aa13.78□□□□□ -0.2
UBXN4-203ENST00000416538 MAPRE3Q9UPY8 281 aa13.78□□□□□ -0.2
UBXN4-203ENST00000416538 CCL27Q9Y4X3 112 aa13.78□□□□□ -0.2
UBXN4-203ENST00000416538 POLR3HQ9Y535 204 aaPredicted RBP13.78□□□□□ -0.2
UBXN4-203ENST00000416538 ZNF780BQ9Y6R6 833 aa13.78□□□□□ -0.2
UBXN4-203ENST00000416538 PRAMEF25A6NGN4 478 aa13.77□□□□□ -0.21
UBXN4-203ENST00000416538 ACOX3O15254 700 aa13.77□□□□□ -0.21
UBXN4-203ENST00000416538 ICOSLGO75144 302 aa13.77□□□□□ -0.21
UBXN4-203ENST00000416538 TRAPPC6AO75865 159 aa13.77□□□□□ -0.21
UBXN4-203ENST00000416538 HOXD4P09016 255 aaPredicted RBP13.77□□□□□ -0.21
UBXN4-203ENST00000416538 ANXA4P09525 319 aaPredicted RBP13.77□□□□□ -0.21
UBXN4-203ENST00000416538 DRD2P14416 443 aa13.77□□□□□ -0.21
UBXN4-203ENST00000416538 GABRA1P14867 456 aa13.77□□□□□ -0.21
UBXN4-203ENST00000416538 NAGAP17050 411 aa13.77□□□□□ -0.21
UBXN4-203ENST00000416538 BMP7P18075 431 aa13.77□□□□□ -0.21
UBXN4-203ENST00000416538 DRD5P21918 477 aa13.77□□□□□ -0.21
UBXN4-203ENST00000416538 NUP214P35658 2090 aaPredicted RBP13.77□□□□□ -0.21
UBXN4-203ENST00000416538 ABCA4P78363 2273 aa13.77□□□□□ -0.21
UBXN4-203ENST00000416538 ZNF763Q0D2J5 394 aa13.77□□□□□ -0.21
UBXN4-203ENST00000416538 RIPPLY2Q5TAB7 128 aa13.77□□□□□ -0.21
UBXN4-203ENST00000416538 VASNQ6EMK4 673 aa13.77□□□□□ -0.21
UBXN4-203ENST00000416538 YRDCQ86U90 279 aaKnown RBP13.77□□□□□ -0.21
UBXN4-203ENST00000416538 TDRPQ86YL5 185 aa13.77□□□□□ -0.21
UBXN4-203ENST00000416538 C4orf33Q8N1A6 199 aa13.77□□□□□ -0.21
UBXN4-203ENST00000416538 WDSUB1Q8N9V3 476 aa13.77□□□□□ -0.21
UBXN4-203ENST00000416538 FAM83FQ8NEG4 500 aaPredicted RBP13.77□□□□□ -0.21
UBXN4-203ENST00000416538 OR4N2Q8NGD1 307 aa13.77□□□□□ -0.21
UBXN4-203ENST00000416538 CDC26Q8NHZ8 85 aa13.77□□□□□ -0.21
UBXN4-203ENST00000416538 RNF138Q8WVD3 245 aa13.77□□□□□ -0.21
UBXN4-203ENST00000416538 UBLCP1Q8WVY7 318 aaPredicted RBP13.77□□□□□ -0.21
UBXN4-203ENST00000416538 FOLH1BQ9HBA9 442 aa13.77□□□□□ -0.21
UBXN4-203ENST00000416538 CFL2Q9Y281 166 aa13.77□□□□□ -0.21
UBXN4-203ENST00000416538 STK38LQ9Y2H1 464 aa13.77□□□□□ -0.21
UBXN4-203ENST00000416538 L3MBTL1Q9Y468 752 aa13.77□□□□□ -0.21
UBXN4-203ENST00000416538 PCDHGB3Q9Y5G1 929 aa13.77□□□□□ -0.21
UBXN4-203ENST00000416538 TSPAN2O60636 221 aa13.76□□□□□ -0.21
UBXN4-203ENST00000416538 ERN1O75460 977 aaKnown RBP13.76□□□□□ -0.21
UBXN4-203ENST00000416538 KRT15P19012 456 aa13.76□□□□□ -0.21
UBXN4-203ENST00000416538 DDCP20711 480 aa13.76□□□□□ -0.21
UBXN4-203ENST00000416538 TACR1P25103 407 aa13.76□□□□□ -0.21
UBXN4-203ENST00000416538 CEACAM8P31997 349 aaPredicted RBP13.76□□□□□ -0.21
UBXN4-203ENST00000416538 CRHR1P34998 444 aa13.76□□□□□ -0.21
UBXN4-203ENST00000416538 MC3RP41968 323 aa13.76□□□□□ -0.21
UBXN4-203ENST00000416538 PCLAFQ15004 111 aa13.76□□□□□ -0.21
UBXN4-203ENST00000416538 NHSL2Q5HYW2 709 aa13.76□□□□□ -0.21
UBXN4-203ENST00000416538 CLEC6AQ6EIG7 209 aa13.76□□□□□ -0.21
UBXN4-203ENST00000416538 FAM71E1Q6IPT2 247 aa13.76□□□□□ -0.21
UBXN4-203ENST00000416538 PLXDC2Q6UX71 529 aa13.76□□□□□ -0.21
UBXN4-203ENST00000416538 NUP54Q7Z3B4 507 aa13.76□□□□□ -0.21
UBXN4-203ENST00000416538 WDR53Q7Z5U6 358 aaPredicted RBP13.76□□□□□ -0.21
UBXN4-203ENST00000416538 PACS2Q86VP3 889 aa13.76□□□□□ -0.21
UBXN4-203ENST00000416538 FAM9CQ8IZT9 166 aa13.76□□□□□ -0.21
UBXN4-203ENST00000416538 EIF1ADQ8N9N8 165 aaKnown RBP13.76□□□□□ -0.21
UBXN4-203ENST00000416538 OR2T11Q8NH01 316 aa13.76□□□□□ -0.21
UBXN4-203ENST00000416538 OR2W6PQ8NHA6 318 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms