RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 C11orf96Q7Z7L8 435 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 C11orf74Q86VG3 221 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 GJD3Q8N144 294 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 TFGQ92734 400 aaPredicted RBP9.23□□□□□ -0.93
CD44-206ENST00000415148 UFD1Q92890 307 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 SNAPC3Q92966 411 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 ARHGAP9Q9BRR9 750 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 PINK1Q9BXM7 581 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 SERHL2Q9H4I8 314 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 LHX9Q9NQ69 397 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 MAN2C1Q9NTJ4 1040 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 HCFC1R1Q9NWW0 138 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 C5AR2Q9P296 337 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 FBXW2Q9UKT8 454 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 PCDHGB7Q9Y5F8 929 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 ALG5Q9Y673 324 aa9.23□□□□□ -0.93
CD44-206ENST00000415148 TRDV1A0A1B0GX56 115 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 SHISA3A0PJX4 238 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 PRAMEF27A3QJZ7 478 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 K7ESM1 405 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 RTCAO00442 366 aaKnown RBP9.22□□□□□ -0.93
CD44-206ENST00000415148 NDUFS4O43181 175 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 PROM1O43490 865 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 ZNF780AO75290 641 aaPredicted RBP9.22□□□□□ -0.93
CD44-206ENST00000415148 IFI30P13284 250 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 GNG2P59768 71 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 ARPC4P59998 168 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 ACSM1Q08AH1 577 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 RIN1Q13671 783 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 OR4C11Q6IEV9 310 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 SLC27A4Q6P1M0 643 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 SLC39A5Q6ZMH5 540 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 SLC38A6Q8IZM9 456 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 DTX3Q8N9I9 347 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 ZNF784Q8NCA9 323 aaPredicted RBP9.22□□□□□ -0.93
CD44-206ENST00000415148 DUSP18Q8NEJ0 188 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 OR5AR1Q8NGP9 310 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 OR52P1PQ8NH57 321 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 OR5K2Q8NHB8 316 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 GRPEL2Q8TAA5 225 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 SFXN5Q8TD22 340 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 XAGE5Q8WWM1 108 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 UCN3Q969E3 161 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 EXOSC8Q96B26 276 aaKnown RBP9.22□□□□□ -0.93
CD44-206ENST00000415148 TCEAL4Q96EI5 215 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 CHFRQ96EP1 664 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 C1GALT1C1Q96EU7 318 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 OTUB1Q96FW1 271 aaPredicted RBP9.22□□□□□ -0.93
CD44-206ENST00000415148 IL17FQ96PD4 163 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 SLC38A2Q96QD8 506 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 TRAF4Q9BUZ4 470 aaPredicted RBP9.22□□□□□ -0.93
CD44-206ENST00000415148 KATNB1Q9BVA0 655 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 ANKRD19PQ9H560 264 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 TOR4AQ9NXH8 423 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 TAC3Q9UHF0 121 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 KDM4EB2RXH2 506 aaPredicted RBP9.22□□□□□ -0.93
CD44-206ENST00000415148 LZTS3O60299 673 aaPredicted RBP9.22□□□□□ -0.93
CD44-206ENST00000415148 PLOD3O60568 738 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 ICMTO60725 284 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 LALBAP00709 142 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 C6P13671 934 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 GALP22466 123 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 CFL1P23528 166 aaKnown RBP9.22□□□□□ -0.93
CD44-206ENST00000415148 PTGER1P34995 402 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 MTNR1AP48039 350 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 RAB25P57735 213 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 ARHGEF6Q15052 776 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 TATDN3Q17R31 274 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 CRTC2Q53ET0 693 aaPredicted RBP9.22□□□□□ -0.93
CD44-206ENST00000415148 MZT2BQ6NZ67 158 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 IQCHQ86VS3 1027 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 AMZ2Q86W34 360 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 TCTE3Q8IZS6 198 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 C2orf73Q8N5S3 287 aaPredicted RBP9.22□□□□□ -0.93
CD44-206ENST00000415148 SUN3Q8TAQ9 357 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 TEX47Q8TBZ9 253 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 GATAD2BQ8WXI9 593 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 TRIM63Q969Q1 353 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 UPRTQ96BW1 309 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 MOAP1Q96BY2 351 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 RNFT2Q96EX2 444 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 SENP5Q96HI0 755 aaPredicted RBP9.22□□□□□ -0.93
CD44-206ENST00000415148 RIPOR3Q96MK2 946 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 AMDHD1Q96NU7 426 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 SAP130Q9H0E3 1048 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 CTPS2Q9NRF8 586 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 GIMAP4Q9NUV9 329 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 COMMD3Q9UBI1 195 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 KLHL21Q9UJP4 597 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 SLC27A6Q9Y2P4 619 aa9.22□□□□□ -0.93
CD44-206ENST00000415148 A0A0A6YYD5 115 aa9.21□□□□□ -0.93
CD44-206ENST00000415148 M0R3H8 397 aa9.21□□□□□ -0.93
CD44-206ENST00000415148 SYT5O00445 386 aa9.21□□□□□ -0.93
CD44-206ENST00000415148 TMPRSS11DO60235 418 aa9.21□□□□□ -0.93
CD44-206ENST00000415148 HPGDSO60760 199 aa9.21□□□□□ -0.93
CD44-206ENST00000415148 EFCAB14O75071 495 aa9.21□□□□□ -0.93
CD44-206ENST00000415148 CLEC3AO75596 197 aa9.21□□□□□ -0.93
CD44-206ENST00000415148 ALAS2P22557 587 aa9.21□□□□□ -0.93
CD44-206ENST00000415148 DEFB103AP81534 67 aa9.21□□□□□ -0.93
CD44-206ENST00000415148 FAPQ12884 760 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms