RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 EFNA1P20827 205 aaPredicted RBP15.2■□□□□ 0.02
LINC00398-201ENST00000414407 NME2P22392 152 aa15.2■□□□□ 0.02
LINC00398-201ENST00000414407 ABCD3P28288 659 aa15.2■□□□□ 0.02
LINC00398-201ENST00000414407 ZFP36L2P47974 494 aaKnown RBP15.2■□□□□ 0.02
LINC00398-201ENST00000414407 CCT3P49368 545 aaKnown RBP15.2■□□□□ 0.02
LINC00398-201ENST00000414407 HBA1P69905 142 aa15.2■□□□□ 0.02
LINC00398-201ENST00000414407 ZNHIT3Q15649 155 aaPredicted RBP15.2■□□□□ 0.02
LINC00398-201ENST00000414407 NTRK2Q16620 822 aa15.2■□□□□ 0.02
LINC00398-201ENST00000414407 VPS26BQ4G0F5 336 aa15.2■□□□□ 0.02
LINC00398-201ENST00000414407 CT45A2Q5DJT8 189 aa15.2■□□□□ 0.02
LINC00398-201ENST00000414407 CGB2Q6NT52 195 aa15.2■□□□□ 0.02
LINC00398-201ENST00000414407 BHLHB9Q6PI77 547 aa15.2■□□□□ 0.02
LINC00398-201ENST00000414407 PAOXQ6QHF9 649 aa15.2■□□□□ 0.02
LINC00398-201ENST00000414407 CDRT4Q8N9R6 151 aa15.2■□□□□ 0.02
LINC00398-201ENST00000414407 OR56A1Q8NGH5 318 aa15.2■□□□□ 0.02
LINC00398-201ENST00000414407 GOT1L1Q8NHS2 421 aaPredicted RBP15.2■□□□□ 0.02
LINC00398-201ENST00000414407 FAM120BQ96EK7 910 aaKnown RBP15.2■□□□□ 0.02
LINC00398-201ENST00000414407 MAGED4Q96JG8 741 aa15.2■□□□□ 0.02
LINC00398-201ENST00000414407 RILPQ96NA2 401 aa15.2■□□□□ 0.02
LINC00398-201ENST00000414407 CCDC115Q96NT0 180 aa15.2■□□□□ 0.02
LINC00398-201ENST00000414407 SECISBP2Q96T21 854 aaKnown RBP15.2■□□□□ 0.02
LINC00398-201ENST00000414407 LMF2Q9BU23 707 aaKnown RBP15.2■□□□□ 0.02
LINC00398-201ENST00000414407 TMEM120AQ9BXJ8 343 aa15.2■□□□□ 0.02
LINC00398-201ENST00000414407 RABEP2Q9H5N1 569 aa15.2■□□□□ 0.02
LINC00398-201ENST00000414407 CXorf36Q9H7Y0 433 aa15.2■□□□□ 0.02
LINC00398-201ENST00000414407 SH2D2AQ9NP31 389 aa15.2■□□□□ 0.02
LINC00398-201ENST00000414407 ZCCHC3Q9NUD5 404 aaKnown RBP15.2■□□□□ 0.02
LINC00398-201ENST00000414407 MRGBPQ9NV56 204 aa15.2■□□□□ 0.02
LINC00398-201ENST00000414407 KLHL14Q9P2G3 628 aa15.2■□□□□ 0.02
LINC00398-201ENST00000414407 KLF13Q9Y2Y9 288 aaPredicted RBP15.2■□□□□ 0.02
LINC00398-201ENST00000414407 COPG1Q9Y678 874 aaKnown RBP15.2■□□□□ 0.02
LINC00398-201ENST00000414407 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.19■□□□□ 0.02
LINC00398-201ENST00000414407 MAP3K8P41279 467 aa15.19■□□□□ 0.02
LINC00398-201ENST00000414407 ST13P50502 369 aaKnown RBP15.19■□□□□ 0.02
LINC00398-201ENST00000414407 POLR2JP52435 117 aaKnown RBP15.19■□□□□ 0.02
LINC00398-201ENST00000414407 DGKQP52824 942 aa15.19■□□□□ 0.02
LINC00398-201ENST00000414407 ARFIP2P53365 341 aa15.19■□□□□ 0.02
LINC00398-201ENST00000414407 PSG6Q00889 435 aa15.19■□□□□ 0.02
LINC00398-201ENST00000414407 ZNF155Q12901 538 aaPredicted RBP15.19■□□□□ 0.02
LINC00398-201ENST00000414407 SQLEQ14534 574 aa15.19■□□□□ 0.02
LINC00398-201ENST00000414407 MAPKAPK3Q16644 382 aa15.19■□□□□ 0.02
LINC00398-201ENST00000414407 CYP27C1Q4G0S4 372 aa15.19■□□□□ 0.02
LINC00398-201ENST00000414407 MDGA2Q7Z553 956 aa15.19■□□□□ 0.02
LINC00398-201ENST00000414407 CLECL1Q8IZS7 167 aa15.19■□□□□ 0.02
LINC00398-201ENST00000414407 SLC34A3Q8N130 599 aa15.19■□□□□ 0.02
LINC00398-201ENST00000414407 PAQR8Q8TEZ7 354 aa15.19■□□□□ 0.02
LINC00398-201ENST00000414407 GIMAP5Q96F15 307 aa15.19■□□□□ 0.02
LINC00398-201ENST00000414407 OR52E6Q96RD3 313 aa15.19■□□□□ 0.02
LINC00398-201ENST00000414407 TRIM4Q9C037 500 aa15.19■□□□□ 0.02
LINC00398-201ENST00000414407 GIN1Q9NXP7 522 aa15.19■□□□□ 0.02
LINC00398-201ENST00000414407 SNX8Q9Y5X2 465 aa15.19■□□□□ 0.02
LINC00398-201ENST00000414407 TTLL8A6PVC2 850 aa15.18■□□□□ 0.02
LINC00398-201ENST00000414407 KLRC4-KLRK1H3BQV0 150 aa15.18■□□□□ 0.02
LINC00398-201ENST00000414407 TP53I11O14683 189 aa15.18■□□□□ 0.02
LINC00398-201ENST00000414407 ABCB7O75027 752 aa15.18■□□□□ 0.02
LINC00398-201ENST00000414407 PPM1BO75688 479 aa15.18■□□□□ 0.02
LINC00398-201ENST00000414407 KRT16P08779 473 aa15.18■□□□□ 0.02
LINC00398-201ENST00000414407 PRIM2P49643 509 aa15.18■□□□□ 0.02
LINC00398-201ENST00000414407 PRKAG1P54619 331 aa15.18■□□□□ 0.02
LINC00398-201ENST00000414407 CORO7P57737 925 aa15.18■□□□□ 0.02
LINC00398-201ENST00000414407 PLCXD2Q0VAA5 305 aa15.18■□□□□ 0.02
LINC00398-201ENST00000414407 INPP5JQ15735 1006 aaPredicted RBP15.18■□□□□ 0.02
LINC00398-201ENST00000414407 SPDYE7PQ495Y7 208 aa15.18■□□□□ 0.02
LINC00398-201ENST00000414407 EXOSC6Q5RKV6 272 aaKnown RBP15.18■□□□□ 0.02
LINC00398-201ENST00000414407 MFSD12Q6NUT3 480 aa15.18■□□□□ 0.02
LINC00398-201ENST00000414407 NPSR1Q6W5P4 371 aa15.18■□□□□ 0.02
LINC00398-201ENST00000414407 NUP54Q7Z3B4 507 aa15.18■□□□□ 0.02
LINC00398-201ENST00000414407 SLC44A2Q8IWA5 706 aaPredicted RBP15.18■□□□□ 0.02
LINC00398-201ENST00000414407 FAM98AQ8NCA5 519 aaKnown RBP15.18■□□□□ 0.02
LINC00398-201ENST00000414407 PSD4Q8NDX1 1056 aa15.18■□□□□ 0.02
LINC00398-201ENST00000414407 OR4A15Q8NGL6 344 aa15.18■□□□□ 0.02
LINC00398-201ENST00000414407 OMA1Q96E52 524 aa15.18■□□□□ 0.02
LINC00398-201ENST00000414407 ZNF385DQ9H6B1 395 aa15.18■□□□□ 0.02
LINC00398-201ENST00000414407 RMND5AQ9H871 391 aa15.18■□□□□ 0.02
LINC00398-201ENST00000414407 Q9N2J8 555 aa15.18■□□□□ 0.02
LINC00398-201ENST00000414407 FAM53CQ9NYF3 392 aa15.18■□□□□ 0.02
LINC00398-201ENST00000414407 CNIH4Q9P003 139 aa15.18■□□□□ 0.02
LINC00398-201ENST00000414407 LUZP4Q9P127 313 aa15.18■□□□□ 0.02
LINC00398-201ENST00000414407 MAP10Q9P2G4 905 aa15.18■□□□□ 0.02
LINC00398-201ENST00000414407 SMG1Q96Q15 3661 aaKnown RBP15.18■□□□□ 0.02
LINC00398-201ENST00000414407 ASPDHA6ND91 283 aa15.17■□□□□ 0.02
LINC00398-201ENST00000414407 C9JVG2 144 aa15.17■□□□□ 0.02
LINC00398-201ENST00000414407 NKX2-2O95096 273 aa15.17■□□□□ 0.02
LINC00398-201ENST00000414407 RASAL1O95294 804 aa15.17■□□□□ 0.02
LINC00398-201ENST00000414407 HMGN2P05204 90 aaKnown RBP15.17■□□□□ 0.02
LINC00398-201ENST00000414407 ABCB1P08183 1280 aaPredicted RBP15.17■□□□□ 0.02
LINC00398-201ENST00000414407 NCF2P19878 526 aaPredicted RBP15.17■□□□□ 0.02
LINC00398-201ENST00000414407 UQCRC2P22695 453 aa15.17■□□□□ 0.02
LINC00398-201ENST00000414407 LSP1P33241 339 aa15.17■□□□□ 0.02
LINC00398-201ENST00000414407 RPP38P78345 283 aaKnown RBP15.17■□□□□ 0.02
LINC00398-201ENST00000414407 RCAN2Q14206 197 aa15.17■□□□□ 0.02
LINC00398-201ENST00000414407 NNATQ16517 81 aa15.17■□□□□ 0.02
LINC00398-201ENST00000414407 SLC22A10Q63ZE4 541 aa15.17■□□□□ 0.02
LINC00398-201ENST00000414407 TMEM81Q6P7N7 255 aa15.17■□□□□ 0.02
LINC00398-201ENST00000414407 BLOC1S3Q6QNY0 202 aa15.17■□□□□ 0.02
LINC00398-201ENST00000414407 SZRD1Q7Z422 152 aa15.17■□□□□ 0.02
LINC00398-201ENST00000414407 GALNTL5Q7Z4T8 443 aa15.17■□□□□ 0.02
LINC00398-201ENST00000414407 ANKRD46Q86W74 232 aa15.17■□□□□ 0.02
LINC00398-201ENST00000414407 CPSF7Q8N684 471 aaKnown RBP15.17■□□□□ 0.02
LINC00398-201ENST00000414407 TRIML2Q8N7C3 387 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms