RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 CCDC28AQ8IWP9 274 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 APCDD1Q8J025 514 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 L3MBTL4Q8NA19 623 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 OR6F1Q8NGZ6 308 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 LGALS12Q96DT0 336 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 ZHX1-C8orf76Q96EF9 292 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 VAT1Q99536 393 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 DHRS9Q9BPW9 319 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 UGT2B28Q9BY64 529 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 DPH1Q9BZG8 443 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 GPN1Q9HCN4 374 aaPredicted RBP8.87□□□□□ -0.99
SNHG3-201ENST00000413987 NT5MQ9NPB1 228 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 CCNB1IP1Q9NPC3 277 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 HEYLQ9NQ87 328 aaPredicted RBP8.87□□□□□ -0.99
SNHG3-201ENST00000413987 SDR39U1Q9NRG7 319 aaPredicted RBP8.87□□□□□ -0.99
SNHG3-201ENST00000413987 TMEM45AQ9NWC5 275 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 SCN3BQ9NY72 215 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 LSM7Q9UK45 103 aaKnown RBP8.87□□□□□ -0.99
SNHG3-201ENST00000413987 FBXO5Q9UKT4 447 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 VPS4AQ9UN37 437 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 MTCH2Q9Y6C9 303 aa8.87□□□□□ -0.99
SNHG3-201ENST00000413987 PNMA8CA0A1B0GUJ8 204 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 LOC100130705A0A1B0GUX0 176 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 A0A1B0GVM2 712 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 ANTXRLA6NF34 631 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 WASH4PA8MWX3 477 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 A8MZ25 164 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 SUPT3HB4E1H0 165 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 PYCARD-AS1I3L0S3 204 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 GPR171O14626 319 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 RHOCP08134 193 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 F7P08709 466 aaPredicted RBP8.86□□□□□ -0.99
SNHG3-201ENST00000413987 DMDP11532 3685 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 HOXB6P17509 224 aaKnown RBP8.86□□□□□ -0.99
SNHG3-201ENST00000413987 ACP1P24666 158 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 PKLRP30613 574 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 DDOSTP39656 456 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 CDH4P55283 916 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 CXCR4P61073 352 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 ISL1P61371 349 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 PRKCDQ05655 676 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 CDH18Q13634 790 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 PCID2Q5JVF3 399 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 CATSPEREQ5SY80 951 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 ZNF691Q5VV52 312 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 ASTLQ6HA08 431 aaPredicted RBP8.86□□□□□ -0.99
SNHG3-201ENST00000413987 GLYATQ6IB77 296 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 ANKRD54Q6NXT1 300 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 METTL2BQ6P1Q9 378 aaKnown RBP8.86□□□□□ -0.99
SNHG3-201ENST00000413987 TRILQ7L0X0 811 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 PHYKPLQ8IUZ5 450 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 ZDHHC21Q8IVQ6 265 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 PGBD5Q8N414 524 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 GALNT11Q8NCW6 608 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 MITD1Q8WV92 249 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 L3HYPDHQ96EM0 354 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 REXO5Q96IC2 774 aaKnown RBP8.86□□□□□ -0.99
SNHG3-201ENST00000413987 SRSF8Q9BRL6 282 aaKnown RBP8.86□□□□□ -0.99
SNHG3-201ENST00000413987 PKIBQ9C010 78 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 KCNK12Q9HB15 430 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 RBM22Q9NW64 420 aaKnown RBP eCLIP8.86□□□□□ -0.992e-18■■□□□ 13.5
SNHG3-201ENST00000413987 BEX4Q9NWD9 120 aaPredicted RBP8.86□□□□□ -0.99
SNHG3-201ENST00000413987 TAS2R7Q9NYW3 318 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 CHRNA9Q9UGM1 479 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 STOML2Q9UJZ1 356 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 MKLN1Q9UL63 735 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 ORC6Q9Y5N6 252 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 OAS3Q9Y6K5 1087 aaKnown RBP8.86□□□□□ -0.99
SNHG3-201ENST00000413987 RNF215Q9Y6U7 377 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 MAU2Q9Y6X3 613 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 HSPE1-MOB4S4R3N1 261 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 J3QW42 95 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 EEDO75530 441 aaKnown RBP8.86□□□□□ -0.99
SNHG3-201ENST00000413987 SEMA3DO95025 777 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 MED26O95402 600 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 TRAPPC2P0DI81 140 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 TRAPPC2BP0DI82 140 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 NCK1P16333 377 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 NUDT1P36639 197 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 RGRP47804 291 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 CCR4P51679 360 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 ZNF135P52742 658 aaPredicted RBP8.86□□□□□ -0.99
SNHG3-201ENST00000413987 OR2B6P58173 313 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 TAS2R39P59534 338 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 SKP1P63208 163 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 BNC1Q01954 994 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 EMX2Q04743 252 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 DUSP7Q16829 419 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 CTU2Q2VPK5 515 aaKnown RBP8.86□□□□□ -0.99
SNHG3-201ENST00000413987 UGT3A2Q3SY77 523 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 LY6G5CQ5SRR4 150 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 ATAD3CQ5T2N8 411 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 CPZQ66K79 652 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 NRROSQ86YC3 692 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 METTL4Q8N3J2 472 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 COMMD1Q8N668 190 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 TMIEQ8NEW7 156 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 DNAJB14Q8TBM8 379 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 MCOLN3Q8TDD5 553 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 FBLIM1Q8WUP2 373 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms