RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 LMF2Q9BU23 707 aaKnown RBP12.12□□□□□ -0.47
HDAC8-210ENST00000412342 DUSP26Q9BV47 211 aa12.12□□□□□ -0.47
HDAC8-210ENST00000412342 MED4Q9NPJ6 270 aa12.12□□□□□ -0.47
HDAC8-210ENST00000412342 AGPAT4Q9NRZ5 378 aa12.12□□□□□ -0.47
HDAC8-210ENST00000412342 OLAHQ9NV23 265 aa12.12□□□□□ -0.47
HDAC8-210ENST00000412342 DDX18Q9NVP1 670 aaKnown RBP12.12□□□□□ -0.47
HDAC8-210ENST00000412342 TAS2R9Q9NYW1 312 aa12.12□□□□□ -0.47
HDAC8-210ENST00000412342 CNOT11Q9UKZ1 510 aaKnown RBP12.12□□□□□ -0.47
HDAC8-210ENST00000412342 MAPRE3Q9UPY8 281 aa12.12□□□□□ -0.47
HDAC8-210ENST00000412342 NUP214P35658 2090 aaPredicted RBP12.12□□□□□ -0.47
HDAC8-210ENST00000412342 MYO18BQ8IUG5 2567 aa12.12□□□□□ -0.47
HDAC8-210ENST00000412342 NCKAP5O14513 1909 aa12.11□□□□□ -0.47
HDAC8-210ENST00000412342 A0A1W2PRB8 838 aa12.11□□□□□ -0.47
HDAC8-210ENST00000412342 ERN1O75460 977 aaKnown RBP12.11□□□□□ -0.47
HDAC8-210ENST00000412342 PPM1BO75688 479 aa12.11□□□□□ -0.47
HDAC8-210ENST00000412342 TGDSO95455 350 aa12.11□□□□□ -0.47
HDAC8-210ENST00000412342 CRYABP02511 175 aaKnown RBP12.11□□□□□ -0.47
HDAC8-210ENST00000412342 ABCB1P08183 1280 aaPredicted RBP12.11□□□□□ -0.47
HDAC8-210ENST00000412342 EDN3P14138 238 aa12.11□□□□□ -0.47
HDAC8-210ENST00000412342 DDX5P17844 614 aaKnown RBP12.11□□□□□ -0.47
HDAC8-210ENST00000412342 IL12AP29459 219 aa12.11□□□□□ -0.47
HDAC8-210ENST00000412342 FBXW4P57775 412 aa12.11□□□□□ -0.47
HDAC8-210ENST00000412342 UFM1P61960 85 aa12.11□□□□□ -0.47
HDAC8-210ENST00000412342 FOXO1Q12778 655 aa12.11□□□□□ -0.47
HDAC8-210ENST00000412342 RPS6KA2Q15349 733 aa12.11□□□□□ -0.47
HDAC8-210ENST00000412342 LSM12Q3MHD2 195 aaKnown RBP12.11□□□□□ -0.47
HDAC8-210ENST00000412342 TMEM198Q66K66 360 aa12.11□□□□□ -0.47
HDAC8-210ENST00000412342 DESI1Q6ICB0 168 aa12.11□□□□□ -0.47
HDAC8-210ENST00000412342 OR4F3Q6IEY1 312 aa12.11□□□□□ -0.47
HDAC8-210ENST00000412342 FBXW8Q8N3Y1 598 aa12.11□□□□□ -0.47
HDAC8-210ENST00000412342 NATD1Q8N6N6 113 aa12.11□□□□□ -0.47
HDAC8-210ENST00000412342 OR2M7Q8NG81 312 aa12.11□□□□□ -0.47
HDAC8-210ENST00000412342 OR5P2Q8WZ92 322 aa12.11□□□□□ -0.47
HDAC8-210ENST00000412342 HGDQ93099 445 aa12.11□□□□□ -0.47
HDAC8-210ENST00000412342 OMA1Q96E52 524 aa12.11□□□□□ -0.47
HDAC8-210ENST00000412342 FAM120BQ96EK7 910 aaKnown RBP12.11□□□□□ -0.47
HDAC8-210ENST00000412342 EBF4Q9BQW3 602 aa12.11□□□□□ -0.47
HDAC8-210ENST00000412342 DPY30Q9C005 99 aa12.11□□□□□ -0.47
HDAC8-210ENST00000412342 CLMPQ9H6B4 373 aa12.11□□□□□ -0.47
HDAC8-210ENST00000412342 CXorf36Q9H7Y0 433 aa12.11□□□□□ -0.47
HDAC8-210ENST00000412342 ATAD3AQ9NVI7 634 aa12.11□□□□□ -0.47
HDAC8-210ENST00000412342 FLNCQ14315 2725 aa12.1□□□□□ -0.47
HDAC8-210ENST00000412342 SVILO95425 2214 aa12.1□□□□□ -0.47
HDAC8-210ENST00000412342 G3V3Y1 287 aa12.1□□□□□ -0.47
HDAC8-210ENST00000412342 KLRC4-KLRK1H3BQV0 150 aa12.1□□□□□ -0.47
HDAC8-210ENST00000412342 TSPAN2O60636 221 aa12.1□□□□□ -0.47
HDAC8-210ENST00000412342 EDF1O60869 148 aaKnown RBP12.1□□□□□ -0.47
HDAC8-210ENST00000412342 DIAPH2O60879 1101 aa12.1□□□□□ -0.47
HDAC8-210ENST00000412342 GLSO94925 669 aaPredicted RBP12.1□□□□□ -0.47
HDAC8-210ENST00000412342 C6orf47O95873 294 aa12.1□□□□□ -0.47
HDAC8-210ENST00000412342 CNR1P21554 472 aa12.1□□□□□ -0.47
HDAC8-210ENST00000412342 GNLYP22749 145 aa12.1□□□□□ -0.47
HDAC8-210ENST00000412342 GPC1P35052 558 aa12.1□□□□□ -0.47
HDAC8-210ENST00000412342 ZFP36L2P47974 494 aaKnown RBP12.1□□□□□ -0.47
HDAC8-210ENST00000412342 DNASE1L1P49184 302 aa12.1□□□□□ -0.47
HDAC8-210ENST00000412342 IDH3AP50213 366 aa12.1□□□□□ -0.47
HDAC8-210ENST00000412342 NRG3P56975 720 aa12.1□□□□□ -0.47
HDAC8-210ENST00000412342 HBA1P69905 142 aa12.1□□□□□ -0.47
HDAC8-210ENST00000412342 ZNF155Q12901 538 aaPredicted RBP12.1□□□□□ -0.47
HDAC8-210ENST00000412342 MRPL49Q13405 166 aaKnown RBP12.1□□□□□ -0.47
HDAC8-210ENST00000412342 SPANXN4Q5MJ08 99 aa12.1□□□□□ -0.47
HDAC8-210ENST00000412342 SLC22A10Q63ZE4 541 aa12.1□□□□□ -0.47
HDAC8-210ENST00000412342 TMEM81Q6P7N7 255 aa12.1□□□□□ -0.47
HDAC8-210ENST00000412342 WDR53Q7Z5U6 358 aaPredicted RBP12.1□□□□□ -0.47
HDAC8-210ENST00000412342 ATCAYQ86WG3 371 aa12.1□□□□□ -0.47
HDAC8-210ENST00000412342 CLECL1Q8IZS7 167 aa12.1□□□□□ -0.47
HDAC8-210ENST00000412342 SLC34A3Q8N130 599 aa12.1□□□□□ -0.47
HDAC8-210ENST00000412342 POGLUT1Q8NBL1 392 aa12.1□□□□□ -0.47
HDAC8-210ENST00000412342 FAM98AQ8NCA5 519 aaKnown RBP12.1□□□□□ -0.47
HDAC8-210ENST00000412342 ST6GALNAC3Q8NDV1 305 aa12.1□□□□□ -0.47
HDAC8-210ENST00000412342 OR4N2Q8NGD1 307 aa12.1□□□□□ -0.47
HDAC8-210ENST00000412342 CEP70Q8NHQ1 597 aa12.1□□□□□ -0.47
HDAC8-210ENST00000412342 SPPL2AQ8TCT8 520 aa12.1□□□□□ -0.47
HDAC8-210ENST00000412342 RNF138Q8WVD3 245 aa12.1□□□□□ -0.47
HDAC8-210ENST00000412342 STON2Q8WXE9 905 aa12.1□□□□□ -0.47
HDAC8-210ENST00000412342 TMBIM1Q969X1 311 aa12.1□□□□□ -0.47
HDAC8-210ENST00000412342 SLC35A4Q96G79 324 aa12.1□□□□□ -0.47
HDAC8-210ENST00000412342 MAGED4Q96JG8 741 aa12.1□□□□□ -0.47
HDAC8-210ENST00000412342 MARK4Q96L34 752 aa12.1□□□□□ -0.47
HDAC8-210ENST00000412342 SECISBP2Q96T21 854 aaKnown RBP12.1□□□□□ -0.47
HDAC8-210ENST00000412342 PRPF18Q99633 342 aaKnown RBP12.1□□□□□ -0.47
HDAC8-210ENST00000412342 SACM1LQ9NTJ5 587 aa12.1□□□□□ -0.47
HDAC8-210ENST00000412342 ZGRF1Q86YA3 2104 aa12.1□□□□□ -0.47
HDAC8-210ENST00000412342 POLEQ07864 2286 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 CLEC18AA5D8T8 446 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 ANKRD33BA6NCL7 494 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 LRRC3CA6NJW4 275 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 CAPN14A8MX76 684 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 C9JVG2 144 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 E9PBE3 544 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 RNASET2O00584 256 aaKnown RBP12.09□□□□□ -0.47
HDAC8-210ENST00000412342 ADAM10O14672 748 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 EMC8O43402 210 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 UGT2B11O75310 529 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 NKX2-2O95096 273 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 IDO1P14902 403 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 PIGAP37287 484 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 RFC3P40938 356 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 PTGDSP41222 190 aa12.09□□□□□ -0.47
HDAC8-210ENST00000412342 KIR3DL1P43629 444 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms