RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 C10orf62Q5T681 223 aaPredicted RBP15.17■□□□□ 0.02
MRPL55-220ENST00000411464 SLC48A1Q6P1K1 146 aa15.17■□□□□ 0.02
MRPL55-220ENST00000411464 PLCZ1Q86YW0 608 aa15.17■□□□□ 0.02
MRPL55-220ENST00000411464 ADCY4Q8NFM4 1077 aa15.17■□□□□ 0.02
MRPL55-220ENST00000411464 TRPC4APQ8TEL6 797 aa15.17■□□□□ 0.02
MRPL55-220ENST00000411464 ZNF226Q9NYT6 803 aa15.17■□□□□ 0.02
MRPL55-220ENST00000411464 GRHL1Q9NZI5 618 aa15.17■□□□□ 0.02
MRPL55-220ENST00000411464 C6orf203Q9P0P8 240 aaPredicted RBP15.17■□□□□ 0.02
MRPL55-220ENST00000411464 CLCF1Q9UBD9 225 aa15.17■□□□□ 0.02
MRPL55-220ENST00000411464 PRODH2Q9UF12 536 aa15.17■□□□□ 0.02
MRPL55-220ENST00000411464 TESMINQ9Y4I5 508 aa15.17■□□□□ 0.02
MRPL55-220ENST00000411464 PCDHA9Q9Y5H5 950 aa15.17■□□□□ 0.02
MRPL55-220ENST00000411464 C1orf226A1L170 272 aa15.16■□□□□ 0.02
MRPL55-220ENST00000411464 OR7A17O14581 309 aa15.16■□□□□ 0.02
MRPL55-220ENST00000411464 CTIFO43310 598 aaKnown RBP15.16■□□□□ 0.02
MRPL55-220ENST00000411464 SMNDC1O75940 238 aaKnown RBP eCLIP15.16■□□□□ 0.02
MRPL55-220ENST00000411464 KLHL2O95198 593 aa15.16■□□□□ 0.02
MRPL55-220ENST00000411464 PPICP45877 212 aa15.16■□□□□ 0.02
MRPL55-220ENST00000411464 LHX2P50458 406 aa15.16■□□□□ 0.02
MRPL55-220ENST00000411464 HMGCS1Q01581 520 aa15.16■□□□□ 0.02
MRPL55-220ENST00000411464 CAV1Q03135 178 aa15.16■□□□□ 0.02
MRPL55-220ENST00000411464 MGAT2Q10469 447 aa15.16■□□□□ 0.02
MRPL55-220ENST00000411464 SGO1Q5FBB7 561 aa15.16■□□□□ 0.02
MRPL55-220ENST00000411464 CHMP1BQ7LBR1 199 aa15.16■□□□□ 0.02
MRPL55-220ENST00000411464 P4HA3Q7Z4N8 544 aa15.16■□□□□ 0.02
MRPL55-220ENST00000411464 METTL4Q8N3J2 472 aa15.16■□□□□ 0.02
MRPL55-220ENST00000411464 OR52B6Q8NGF0 335 aa15.16■□□□□ 0.02
MRPL55-220ENST00000411464 OR52R1Q8NGF1 315 aa15.16■□□□□ 0.02
MRPL55-220ENST00000411464 MRRFQ96E11 262 aaKnown RBP15.16■□□□□ 0.02
MRPL55-220ENST00000411464 COX4I2Q96KJ9 171 aa15.16■□□□□ 0.02
MRPL55-220ENST00000411464 SFXN2Q96NB2 322 aa15.16■□□□□ 0.02
MRPL55-220ENST00000411464 COL21A1Q96P44 957 aa15.16■□□□□ 0.02
MRPL55-220ENST00000411464 G6PC3Q9BUM1 346 aa15.16■□□□□ 0.02
MRPL55-220ENST00000411464 BDH2Q9BUT1 245 aa15.16■□□□□ 0.02
MRPL55-220ENST00000411464 MAT2BQ9NZL9 334 aa15.16■□□□□ 0.02
MRPL55-220ENST00000411464 ZNF639Q9UID6 485 aa15.16■□□□□ 0.02
MRPL55-220ENST00000411464 CES1P1Q9UKY3 287 aa15.16■□□□□ 0.02
MRPL55-220ENST00000411464 DLGAP4Q9Y2H0 992 aa15.16■□□□□ 0.02
MRPL55-220ENST00000411464 PLLPQ9Y342 182 aa15.16■□□□□ 0.02
MRPL55-220ENST00000411464 DNHD1Q96M86 4753 aa15.16■□□□□ 0.02
MRPL55-220ENST00000411464 VPS13CQ709C8 3753 aa15.15■□□□□ 0.02
MRPL55-220ENST00000411464 A0A096LPK6 155 aa15.15■□□□□ 0.02
MRPL55-220ENST00000411464 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.15■□□□□ 0.02
MRPL55-220ENST00000411464 A0A1W2PNV4 684 aa15.15■□□□□ 0.02
MRPL55-220ENST00000411464 OR6C70A6NIJ9 312 aa15.15■□□□□ 0.02
MRPL55-220ENST00000411464 H7C1Q1 480 aa15.15■□□□□ 0.02
MRPL55-220ENST00000411464 MSTNO14793 375 aa15.15■□□□□ 0.02
MRPL55-220ENST00000411464 RAD51CO43502 376 aa15.15■□□□□ 0.02
MRPL55-220ENST00000411464 REM1O75628 298 aa15.15■□□□□ 0.02
MRPL55-220ENST00000411464 TNFSF13O75888 250 aa15.15■□□□□ 0.02
MRPL55-220ENST00000411464 FPR1P21462 350 aa15.15■□□□□ 0.02
MRPL55-220ENST00000411464 TYK2P29597 1187 aa15.15■□□□□ 0.02
MRPL55-220ENST00000411464 SRD5A2P31213 254 aa15.15■□□□□ 0.02
MRPL55-220ENST00000411464 FAM27E3Q08E93 113 aa15.15■□□□□ 0.02
MRPL55-220ENST00000411464 TRMT12Q53H54 448 aaKnown RBP15.15■□□□□ 0.02
MRPL55-220ENST00000411464 PRSS57Q6UWY2 283 aa15.15■□□□□ 0.02
MRPL55-220ENST00000411464 PTGR2Q8N8N7 351 aaPredicted RBP15.15■□□□□ 0.02
MRPL55-220ENST00000411464 CTHRC1Q96CG8 243 aa15.15■□□□□ 0.02
MRPL55-220ENST00000411464 KLHL29Q96CT2 875 aa15.15■□□□□ 0.02
MRPL55-220ENST00000411464 PHF21BQ96EK2 531 aa15.15■□□□□ 0.02
MRPL55-220ENST00000411464 Q96MF0 132 aa15.15■□□□□ 0.02
MRPL55-220ENST00000411464 WFIKKN1Q96NZ8 548 aa15.15■□□□□ 0.02
MRPL55-220ENST00000411464 FAM111AQ96PZ2 611 aa15.15■□□□□ 0.02
MRPL55-220ENST00000411464 LRRC1Q9BTT6 524 aa15.15■□□□□ 0.02
MRPL55-220ENST00000411464 MED18Q9BUE0 208 aa15.15■□□□□ 0.02
MRPL55-220ENST00000411464 NTMT1Q9BV86 223 aa15.15■□□□□ 0.02
MRPL55-220ENST00000411464 ELOVL6Q9H5J4 265 aa15.15■□□□□ 0.02
MRPL55-220ENST00000411464 DKKL1Q9UK85 242 aa15.15■□□□□ 0.02
MRPL55-220ENST00000411464 SLC12A4Q9UP95 1085 aa15.15■□□□□ 0.02
MRPL55-220ENST00000411464 UTP11Q9Y3A2 253 aaKnown RBP15.15■□□□□ 0.02
MRPL55-220ENST00000411464 ZNF780BQ9Y6R6 833 aa15.15■□□□□ 0.02
MRPL55-220ENST00000411464 FRG2CA6NGY1 282 aa15.14■□□□□ 0.01
MRPL55-220ENST00000411464 SMAD7O15105 426 aaKnown RBP15.14■□□□□ 0.01
MRPL55-220ENST00000411464 TO15178 435 aa15.14■□□□□ 0.01
MRPL55-220ENST00000411464 ABCB7O75027 752 aa15.14■□□□□ 0.01
MRPL55-220ENST00000411464 CBX7O95931 251 aa15.14■□□□□ 0.01
MRPL55-220ENST00000411464 TGM6O95932 706 aa15.14■□□□□ 0.01
MRPL55-220ENST00000411464 CRHP06850 196 aa15.14■□□□□ 0.01
MRPL55-220ENST00000411464 ZNF708P17019 499 aa15.14■□□□□ 0.01
MRPL55-220ENST00000411464 PCSK6P29122 969 aa15.14■□□□□ 0.01
MRPL55-220ENST00000411464 MC3RP41968 323 aa15.14■□□□□ 0.01
MRPL55-220ENST00000411464 CLDN18P56856 261 aa15.14■□□□□ 0.01
MRPL55-220ENST00000411464 ACKR1Q16570 336 aa15.14■□□□□ 0.01
MRPL55-220ENST00000411464 OR2A2Q6IF42 318 aa15.14■□□□□ 0.01
MRPL55-220ENST00000411464 COMMD6Q7Z4G1 85 aa15.14■□□□□ 0.01
MRPL55-220ENST00000411464 CIARTQ8N365 385 aaPredicted RBP15.14■□□□□ 0.01
MRPL55-220ENST00000411464 CNEP1R1Q8N9A8 125 aa15.14■□□□□ 0.01
MRPL55-220ENST00000411464 SIMC1Q8NDZ2 872 aa15.14■□□□□ 0.01
MRPL55-220ENST00000411464 TMBIM1Q969X1 311 aa15.14■□□□□ 0.01
MRPL55-220ENST00000411464 PIK3IP1Q96FE7 263 aa15.14■□□□□ 0.01
MRPL55-220ENST00000411464 GPR78Q96P69 363 aa15.14■□□□□ 0.01
MRPL55-220ENST00000411464 CCL19Q99731 98 aa15.14■□□□□ 0.01
MRPL55-220ENST00000411464 SLC39A3Q9BRY0 314 aa15.14■□□□□ 0.01
MRPL55-220ENST00000411464 FAIM2Q9BWQ8 316 aa15.14■□□□□ 0.01
MRPL55-220ENST00000411464 VPS11Q9H270 941 aa15.14■□□□□ 0.01
MRPL55-220ENST00000411464 UBTD1Q9HAC8 227 aa15.14■□□□□ 0.01
MRPL55-220ENST00000411464 KLHL28Q9NXS3 571 aa15.14■□□□□ 0.01
MRPL55-220ENST00000411464 FBXL2Q9UKC9 423 aa15.14■□□□□ 0.01
MRPL55-220ENST00000411464 GPR55Q9Y2T6 319 aaPredicted RBP15.14■□□□□ 0.01
MRPL55-220ENST00000411464 MRPS18CQ9Y3D5 142 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms