RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 DOCK10Q96BY6 2186 aa15.33■□□□□ 0.04
TSPAN4-208ENST00000409531 CFAP46Q8IYW2 2715 aa15.33■□□□□ 0.04
TSPAN4-208ENST00000409531 TRBV5-3A0A0A0MS03 114 aa15.33■□□□□ 0.04
TSPAN4-208ENST00000409531 EVPLLA8MZ36 301 aa15.33■□□□□ 0.04
TSPAN4-208ENST00000409531 HRKO00198 91 aa15.33■□□□□ 0.04
TSPAN4-208ENST00000409531 CLIC1O00299 241 aa15.33■□□□□ 0.04
TSPAN4-208ENST00000409531 PSMG1O95456 288 aa15.33■□□□□ 0.04
TSPAN4-208ENST00000409531 HOXB9P17482 250 aaPredicted RBP15.33■□□□□ 0.04
TSPAN4-208ENST00000409531 PRIM2P49643 509 aa15.33■□□□□ 0.04
TSPAN4-208ENST00000409531 RASSF2P50749 326 aa15.33■□□□□ 0.04
TSPAN4-208ENST00000409531 ANXA11P50995 505 aaKnown RBP15.33■□□□□ 0.04
TSPAN4-208ENST00000409531 SOX8P57073 446 aa15.33■□□□□ 0.04
TSPAN4-208ENST00000409531 BNIP1Q12981 228 aa15.33■□□□□ 0.04
TSPAN4-208ENST00000409531 AIMP2Q13155 320 aaKnown RBP15.33■□□□□ 0.04
TSPAN4-208ENST00000409531 MYBPC3Q14896 1274 aa15.33■□□□□ 0.04
TSPAN4-208ENST00000409531 ZNHIT3Q15649 155 aaPredicted RBP15.33■□□□□ 0.04
TSPAN4-208ENST00000409531 SAXO2Q658L1 398 aa15.33■□□□□ 0.04
TSPAN4-208ENST00000409531 C16orf89Q6UX73 402 aa15.33■□□□□ 0.04
TSPAN4-208ENST00000409531 HSDL2Q6YN16 418 aa15.33■□□□□ 0.04
TSPAN4-208ENST00000409531 CCDC121Q6ZUS5 278 aa15.33■□□□□ 0.04
TSPAN4-208ENST00000409531 C6orf120Q7Z4R8 191 aa15.33■□□□□ 0.04
TSPAN4-208ENST00000409531 ZNF605Q86T29 641 aa15.33■□□□□ 0.04
TSPAN4-208ENST00000409531 ZNF615Q8N8J6 731 aa15.33■□□□□ 0.04
TSPAN4-208ENST00000409531 CDRT4Q8N9R6 151 aa15.33■□□□□ 0.04
TSPAN4-208ENST00000409531 C16orf52Q8NHV5 167 aa15.33■□□□□ 0.04
TSPAN4-208ENST00000409531 SLC35G5Q96KT7 338 aa15.33■□□□□ 0.04
TSPAN4-208ENST00000409531 ANKRD27Q96NW4 1050 aa15.33■□□□□ 0.04
TSPAN4-208ENST00000409531 NUDT9Q9BW91 350 aa15.33■□□□□ 0.04
TSPAN4-208ENST00000409531 SLC6A13Q9NSD5 602 aa15.33■□□□□ 0.04
TSPAN4-208ENST00000409531 TP53TG5Q9Y2B4 290 aa15.33■□□□□ 0.04
TSPAN4-208ENST00000409531 HEMK1Q9Y5R4 338 aaPredicted RBP15.33■□□□□ 0.04
TSPAN4-208ENST00000409531 GMEB1Q9Y692 573 aa15.33■□□□□ 0.04
TSPAN4-208ENST00000409531 A6NL46 340 aa15.32■□□□□ 0.04
TSPAN4-208ENST00000409531 B2RBV5 119 aa15.32■□□□□ 0.04
TSPAN4-208ENST00000409531 K7EM74 188 aa15.32■□□□□ 0.04
TSPAN4-208ENST00000409531 HMGN2P05204 90 aaKnown RBP15.32■□□□□ 0.04
TSPAN4-208ENST00000409531 T-ENOLP0DO92 83 aa15.32■□□□□ 0.04
TSPAN4-208ENST00000409531 EMDP50402 254 aa15.32■□□□□ 0.04
TSPAN4-208ENST00000409531 DCAF7P61962 342 aa15.32■□□□□ 0.04
TSPAN4-208ENST00000409531 GTDC1Q4AE62 458 aa15.32■□□□□ 0.04
TSPAN4-208ENST00000409531 RUNDC3AQ59EK9 446 aa15.32■□□□□ 0.04
TSPAN4-208ENST00000409531 HLA-DQA1Q5Y7H0 255 aa15.32■□□□□ 0.04
TSPAN4-208ENST00000409531 JMJD6Q6NYC1 403 aaPredicted RBP15.32■□□□□ 0.04
TSPAN4-208ENST00000409531 ASB18Q6ZVZ8 466 aa15.32■□□□□ 0.04
TSPAN4-208ENST00000409531 KBTBD2Q8IY47 623 aa15.32■□□□□ 0.04
TSPAN4-208ENST00000409531 FDCSPQ8NFU4 85 aa15.32■□□□□ 0.04
TSPAN4-208ENST00000409531 OR8J3Q8NGG0 315 aa15.32■□□□□ 0.04
TSPAN4-208ENST00000409531 OR5L2Q8NGL0 311 aa15.32■□□□□ 0.04
TSPAN4-208ENST00000409531 ELP5Q8TE02 316 aa15.32■□□□□ 0.04
TSPAN4-208ENST00000409531 ACTRT3Q9BYD9 372 aa15.32■□□□□ 0.04
TSPAN4-208ENST00000409531 DEFB126Q9BYW3 111 aa15.32■□□□□ 0.04
TSPAN4-208ENST00000409531 C1orf21Q9H246 121 aa15.32■□□□□ 0.04
TSPAN4-208ENST00000409531 ANKRA2Q9H9E1 313 aa15.32■□□□□ 0.04
TSPAN4-208ENST00000409531 EQTNQ9NQ60 294 aa15.32■□□□□ 0.04
TSPAN4-208ENST00000409531 SLC25A37Q9NYZ2 338 aa15.32■□□□□ 0.04
TSPAN4-208ENST00000409531 AP3M1Q9Y2T2 418 aa15.32■□□□□ 0.04
TSPAN4-208ENST00000409531 PCDHGB7Q9Y5F8 929 aa15.32■□□□□ 0.04
TSPAN4-208ENST00000409531 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 TRBV11-1A0A0K0K1C0 115 aa15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 C2orf92A0A1B0GVN3 265 aa15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 DUXAA6NLW8 204 aa15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 FXYD1O00168 92 aa15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 ZFAND5O76080 213 aa15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 UNC5CO95185 931 aa15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 CLPSP04118 112 aa15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 SERPINA7P05543 415 aa15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 MATN1P21941 496 aa15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 RNF4P78317 190 aa15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 ZNF155Q12901 538 aaPredicted RBP15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 FADDQ13158 208 aa15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 CAPRIN1Q14444 709 aaKnown RBP15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 LASP1Q14847 261 aaKnown RBP15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 IRAK1BP1Q5VVH5 260 aa15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 NANOGP8Q6NSW7 305 aa15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 MFSD12Q6NUT3 480 aa15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 PTRH1Q86Y79 214 aaKnown RBP15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 MSRB3Q8IXL7 192 aa15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 CLEC4FQ8N1N0 589 aa15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 GALNT16Q8N428 558 aa15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 ZNF321PQ8N8H1 164 aa15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 C17orf47Q8NEP4 570 aa15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 OR52N2Q8NGI0 321 aa15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 NUBPLQ8TB37 319 aa15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 MIPOL1Q8TD10 442 aa15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 GIMAP5Q96F15 307 aa15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 AURKBQ96GD4 344 aaPredicted RBP15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 CPPED1Q9BRF8 314 aaPredicted RBP15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 THUMPD3Q9BV44 507 aaKnown RBP15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 EPS8L2Q9H6S3 715 aa15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 NANOGQ9H9S0 305 aa15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 FOLH1BQ9HBA9 442 aa15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 RYDENQ9NUL5 291 aaKnown RBP15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 GPATCH2Q9NW75 528 aa15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 THUMPD1Q9NXG2 353 aaKnown RBP15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 GIN1Q9NXP7 522 aa15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 GPR83Q9NYM4 423 aa15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 PCDHGB3Q9Y5G1 929 aa15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 PCSK5Q92824 1860 aa15.31■□□□□ 0.04
TSPAN4-208ENST00000409531 SUV39H1O43463 412 aa15.3■□□□□ 0.04
TSPAN4-208ENST00000409531 AGR2O95994 175 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms