RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 A0A1B0GVI7 797 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 AP3D1O14617 1153 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 SSX4O60224 188 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 HUS1O60921 280 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 TSC22D2O75157 780 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 SEC22BO75396 215 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 PEX11BO96011 259 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 OR56A5P0C7T3 313 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 SP9P0CG40 484 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 SLC35E2BP0CK96 405 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 ZNF20P17024 532 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 ZNF3P17036 446 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 CAPN3P20807 821 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 HRH2P25021 359 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 FMO3P31513 532 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 YWHABP31946 246 aaKnown RBP5.15□□□□□ -1.58
CLK1-202ENST00000409403 SFNP31947 248 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 TNFSF8P32971 234 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 HSD17B2P37059 387 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 CCR10P46092 362 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 BRCC3P46736 316 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 GLUD2P49448 558 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 STARP49675 285 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 RAB13P51153 203 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 JAK3P52333 1124 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 CLDN20P56880 219 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 DEFB103AP81534 67 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 TIAL1Q01085 375 aaKnown RBP eCLIP5.15□□□□□ -1.58
CLK1-202ENST00000409403 ABRQ12979 859 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 BTN1A1Q13410 526 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 TP53BP2Q13625 1128 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 RAPSNQ13702 412 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 CAPRIN1Q14444 709 aaKnown RBP5.15□□□□□ -1.58
CLK1-202ENST00000409403 MAD2L1BPQ15013 274 aaPredicted RBP5.15□□□□□ -1.58
CLK1-202ENST00000409403 CDSNQ15517 529 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 MICAQ29983 383 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 FKBP1CQ5VVH2 108 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 METTL11BQ5VVY1 283 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 TRIQKQ629K1 86 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 JMJD6Q6NYC1 403 aaPredicted RBP5.15□□□□□ -1.58
CLK1-202ENST00000409403 KLHL17Q6TDP4 642 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 GPRIN3Q6ZVF9 776 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 UTS2BQ765I0 119 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 KRT74Q7RTS7 529 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 DTX2Q86UW9 622 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 IFNEQ86WN2 208 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 IZUMO1Q8IYV9 350 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 LRRC71Q8N4P6 559 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 DPP10Q8N608 796 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 CDC26Q8NHZ8 85 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 WDR36Q8NI36 951 aaKnown RBP5.15□□□□□ -1.58
CLK1-202ENST00000409403 CNIH3Q8TBE1 160 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 UTP15Q8TED0 518 aaKnown RBP5.15□□□□□ -1.58
CLK1-202ENST00000409403 FAM151AQ8WW52 585 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 ELMO1Q92556 727 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 AP3S1Q92572 193 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 OTULINQ96BN8 352 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 MTERF3Q96E29 417 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 L3HYPDHQ96EM0 354 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 C11orf24Q96F05 449 aaPredicted RBP5.15□□□□□ -1.58
CLK1-202ENST00000409403 ZBTB45Q96K62 511 aaPredicted RBP5.15□□□□□ -1.58
CLK1-202ENST00000409403 PPP1R2P1Q96PQ5 205 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 SIGLEC11Q96RL6 698 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 PITX2Q99697 317 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 COPS4Q9BT78 406 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 MLPHQ9BV36 600 aaPredicted RBP5.15□□□□□ -1.58
CLK1-202ENST00000409403 MND1Q9BWT6 205 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 PHF7Q9BWX1 381 aaPredicted RBP5.15□□□□□ -1.58
CLK1-202ENST00000409403 NUSAP1Q9BXS6 441 aaKnown RBP5.15□□□□□ -1.58
CLK1-202ENST00000409403 ELOVL6Q9H5J4 265 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 C8orf33Q9H7E9 229 aaPredicted RBP5.15□□□□□ -1.58
CLK1-202ENST00000409403 MCCC2Q9HCC0 563 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 IL1RAPQ9NPH3 570 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 KRT84Q9NSB2 600 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 SETD4Q9NVD3 440 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 RBFOX1Q9NWB1 397 aaKnown RBP5.15□□□□□ -1.58
CLK1-202ENST00000409403 SLC17A6Q9P2U8 582 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 SEC14L4Q9UDX3 406 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 NDRG3Q9UGV2 375 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 ENOPH1Q9UHY7 261 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 RIMKLBQ9ULI2 386 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 GTF2A1LQ9UNN4 478 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 ABCG2Q9UNQ0 655 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 MFHAS1Q9Y4C4 1052 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 HS3ST4Q9Y661 456 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 ALG5Q9Y673 324 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 KIAA1671Q9BY89 1806 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 MIA3Q5JRA6 1907 aa5.15□□□□□ -1.58
CLK1-202ENST00000409403 FAM240BA0A1B0GVZ2 78 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 RPS10-NUDT3A0A1W2PQS6 291 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 C2CD4BA6NLJ0 364 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 WASHC1A8K0Z3 465 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 H7C2Y5 167 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 WRBO00258 174 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 PCDH17O14917 1159 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 ANKRD28O15084 1053 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 IRAK2O43187 625 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 AKR7A2O43488 359 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 SOX30O94993 753 aa5.15□□□□□ -1.59
CLK1-202ENST00000409403 AP2A1O95782 977 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms