RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 XCR1P46094 333 aa23.77■■□□□ 1.4
SPIRE1-202ENST00000409402 E2F1Q01094 437 aa23.77■■□□□ 1.4
SPIRE1-202ENST00000409402 TMEFF1Q8IYR6 380 aa23.77■■□□□ 1.4
SPIRE1-202ENST00000409402 VWA5B2Q8N398 1253 aa23.77■■□□□ 1.4
SPIRE1-202ENST00000409402 ZNF701Q9NV72 531 aaPredicted RBP23.77■■□□□ 1.4
SPIRE1-202ENST00000409402 ZNF806P0C7X5 589 aa23.76■■□□□ 1.39
SPIRE1-202ENST00000409402 GRPRP30550 384 aa23.76■■□□□ 1.39
SPIRE1-202ENST00000409402 THBS2P35442 1172 aa23.76■■□□□ 1.39
SPIRE1-202ENST00000409402 TEX26Q8N6G2 289 aa23.76■■□□□ 1.39
SPIRE1-202ENST00000409402 FCAMRQ8WWV6 532 aa23.76■■□□□ 1.39
SPIRE1-202ENST00000409402 CITED4Q96RK1 184 aa23.76■■□□□ 1.39
SPIRE1-202ENST00000409402 ZNF451Q9Y4E5 1061 aa23.76■■□□□ 1.39
SPIRE1-202ENST00000409402 AP1M2Q9Y6Q5 423 aa23.76■■□□□ 1.39
SPIRE1-202ENST00000409402 DDCP20711 480 aa23.76■■□□□ 1.39
SPIRE1-202ENST00000409402 TANGO2Q6ICL3 276 aa23.76■■□□□ 1.39
SPIRE1-202ENST00000409402 LRRN1Q6UXK5 716 aa23.76■■□□□ 1.39
SPIRE1-202ENST00000409402 KCMF1Q9P0J7 381 aa23.76■■□□□ 1.39
SPIRE1-202ENST00000409402 HNRNPA0Q13151 305 aaKnown RBP23.76■■□□□ 1.39
SPIRE1-202ENST00000409402 ZNF404Q494X3 552 aa23.76■■□□□ 1.39
SPIRE1-202ENST00000409402 CCSAPQ6IQ19 270 aaPredicted RBP23.76■■□□□ 1.39
SPIRE1-202ENST00000409402 PPP1R3BQ86XI6 285 aa23.76■■□□□ 1.39
SPIRE1-202ENST00000409402 EID2Q8N6I1 236 aa23.76■■□□□ 1.39
SPIRE1-202ENST00000409402 ZNF784Q8NCA9 323 aaPredicted RBP23.76■■□□□ 1.39
SPIRE1-202ENST00000409402 NEIL2Q969S2 332 aa23.76■■□□□ 1.39
SPIRE1-202ENST00000409402 SLC30A2Q9BRI3 323 aa23.76■■□□□ 1.39
SPIRE1-202ENST00000409402 WACQ9BTA9 647 aa23.76■■□□□ 1.39
SPIRE1-202ENST00000409402 MT-ND2P03891 347 aa23.76■■□□□ 1.39
SPIRE1-202ENST00000409402 ZNF619Q8N2I2 560 aa23.76■■□□□ 1.39
SPIRE1-202ENST00000409402 OR8S1Q8NH09 359 aa23.76■■□□□ 1.39
SPIRE1-202ENST00000409402 AIFM2Q9BRQ8 373 aa23.76■■□□□ 1.39
SPIRE1-202ENST00000409402 SMIM30A4D0T7 59 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 BPNT1O95861 308 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 ADH7P40394 386 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 TLE3Q04726 772 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 CEACAM19Q7Z692 300 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 MSANTD3Q96H12 275 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 FAM46AQ96IP4 442 aaKnown RBP23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 ATG5Q9H1Y0 275 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 TAAR2Q9P1P5 351 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 MC3RP41968 323 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 BNIP3Q12983 259 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 EIF5AL1Q6IS14 154 aaKnown RBP23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 CNIH3Q8TBE1 160 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 MUS81Q96NY9 551 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 NAALAD2Q9Y3Q0 740 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 ZBTB42B2RXF5 422 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 GGT1P19440 569 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 PYCR1P32322 319 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 DNASE1L3Q13609 305 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 SFT2D3Q587I9 215 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 ZNF789Q5FWF6 425 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 LETMD1Q6P1Q0 360 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 NEIL3Q8TAT5 605 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 PTERQ96BW5 349 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 KATNBL1Q9H079 304 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 C12orf4Q9NQ89 552 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 TRBV2A0A0J9YWF9 115 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 BLACEA4D250 179 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 ZSCAN5BA6NJL1 495 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 SLC33A1O00400 549 aaPredicted RBP23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 APOL3O95236 402 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 F3P13726 295 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 CTXN1P60606 82 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 ALKAL1Q6UXT8 129 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 ABHD5Q8WTS1 349 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 ZBP1Q9H171 429 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 AURKAO14965 403 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 CKMT1AP12532 417 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 YPEL5P62699 121 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 KCTD9Q7L273 389 aa23.75■■□□□ 1.39
SPIRE1-202ENST00000409402 GMPRP36959 345 aa23.74■■□□□ 1.39
SPIRE1-202ENST00000409402 CTSCP53634 463 aa23.74■■□□□ 1.39
SPIRE1-202ENST00000409402 NUDT15Q9NV35 164 aa23.74■■□□□ 1.39
SPIRE1-202ENST00000409402 KLHL42Q9P2K6 505 aa23.74■■□□□ 1.39
SPIRE1-202ENST00000409402 A0A1B0GVC2 190 aa23.74■■□□□ 1.39
SPIRE1-202ENST00000409402 SNAP29O95721 258 aa23.74■■□□□ 1.39
SPIRE1-202ENST00000409402 PNMTP11086 282 aa23.74■■□□□ 1.39
SPIRE1-202ENST00000409402 ELK4P28324 431 aa23.74■■□□□ 1.39
SPIRE1-202ENST00000409402 RGNQ15493 299 aa23.74■■□□□ 1.39
SPIRE1-202ENST00000409402 MYRFLQ96LU7 910 aa23.74■■□□□ 1.39
SPIRE1-202ENST00000409402 DKK3Q9UBP4 350 aa23.74■■□□□ 1.39
SPIRE1-202ENST00000409402 BCL2L15Q5TBC7 163 aa23.74■■□□□ 1.39
SPIRE1-202ENST00000409402 TLDC1Q6P9B6 456 aa23.74■■□□□ 1.39
SPIRE1-202ENST00000409402 LHFPL3Q86UP9 236 aa23.74■■□□□ 1.39
SPIRE1-202ENST00000409402 ACOT4Q8N9L9 421 aa23.74■■□□□ 1.39
SPIRE1-202ENST00000409402 VNN2O95498 520 aa23.74■■□□□ 1.39
SPIRE1-202ENST00000409402 SFTPDP35247 375 aa23.74■■□□□ 1.39
SPIRE1-202ENST00000409402 RBMXP38159 391 aaKnown RBP23.74■■□□□ 1.39
SPIRE1-202ENST00000409402 PRLHRP49683 370 aa23.74■■□□□ 1.39
SPIRE1-202ENST00000409402 EPHA4P54764 986 aa23.74■■□□□ 1.39
SPIRE1-202ENST00000409402 LIPKQ5VXJ0 399 aa23.74■■□□□ 1.39
SPIRE1-202ENST00000409402 PISDQ9UG56 409 aa23.74■■□□□ 1.39
SPIRE1-202ENST00000409402 RNF215Q9Y6U7 377 aa23.74■■□□□ 1.39
SPIRE1-202ENST00000409402 CHD4Q14839 1912 aa23.74■■□□□ 1.39
SPIRE1-202ENST00000409402 GNRHRP30968 328 aa23.73■■□□□ 1.39
SPIRE1-202ENST00000409402 POU3F4P49335 361 aa23.73■■□□□ 1.39
SPIRE1-202ENST00000409402 ZNF584Q8IVC4 421 aa23.73■■□□□ 1.39
SPIRE1-202ENST00000409402 PRR22Q8IZ63 422 aa23.73■■□□□ 1.39
SPIRE1-202ENST00000409402 OR4K13Q8NH42 304 aa23.73■■□□□ 1.39
SPIRE1-202ENST00000409402 LRR1Q96L50 414 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms