RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 SOCS2O14508 198 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 WNT11O96014 354 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 FMO3P31513 532 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 GRK5P34947 590 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 CDH11P55287 796 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 ZNF829Q3KNS6 432 aaPredicted RBP4.75□□□□□ -1.65
SCN3A-203ENST00000409101 PGM2L1Q6PCE3 622 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 PAQR9Q6ZVX9 377 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 OR13C3Q8NGS6 347 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 HOXB13Q92826 284 aaPredicted RBP4.75□□□□□ -1.65
SCN3A-203ENST00000409101 ECHDC3Q96DC8 303 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 MRGPRX1Q96LB2 322 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 OR52B2Q96RD2 323 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 TTYH2Q9BSA4 534 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 HSD3B7Q9H2F3 369 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 KIR3DX1Q9H7L2 352 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 KCNIP1Q9NZI2 227 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 ERVK-18Q9QC07 812 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.75□□□□□ -1.65
SCN3A-203ENST00000409101 MEMO1Q9Y316 297 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 COL18A1P39060 1754 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 AQP12BA6NM10 295 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 ANHXE9PGG2 379 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 PLOD3O60568 738 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 MRPL33O75394 65 aaKnown RBP4.75□□□□□ -1.65
SCN3A-203ENST00000409101 MTHFD2P13995 350 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 THBS2P35442 1172 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 MLLT10P55197 1068 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 CDH15P55291 814 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 DCDC1P59894 354 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 ST3GAL4Q11206 333 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 DCTN2Q13561 401 aaKnown RBP4.75□□□□□ -1.65
SCN3A-203ENST00000409101 ATP1A4Q13733 1029 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 ALG10BQ5I7T1 473 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 DCST2Q5T1A1 773 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 STEAP4Q687X5 459 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 RANBP10Q6VN20 620 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 MRPL21Q7Z2W9 205 aaKnown RBP4.75□□□□□ -1.65
SCN3A-203ENST00000409101 ZSWIM9Q86XI8 627 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 SLITRK4Q8IW52 837 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 AQP12AQ8IXF9 295 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 PLD6Q8N2A8 252 aaKnown RBP4.75□□□□□ -1.65
SCN3A-203ENST00000409101 POC5Q8NA72 575 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 FAM156AQ8NDB6 213 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 GOT1L1Q8NHS2 421 aaPredicted RBP4.75□□□□□ -1.65
SCN3A-203ENST00000409101 DNAJA4Q8WW22 397 aaPredicted RBP4.75□□□□□ -1.65
SCN3A-203ENST00000409101 LINC01599Q8WXQ3 324 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 NEIL2Q969S2 332 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 FUBP1Q96AE4 644 aaKnown RBP4.75□□□□□ -1.65
SCN3A-203ENST00000409101 PDXPQ96GD0 296 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 MSLNLQ96KJ4 702 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 PIGQQ9BRB3 760 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 GIMAP2Q9UG22 337 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 SARDHQ9UL12 918 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 MKLN1Q9UL63 735 aa4.75□□□□□ -1.65
SCN3A-203ENST00000409101 TRGV8A0A0C4DH27 118 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 TNFRSF10AO00220 468 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 AURKAO14965 403 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 B4GAT1O43505 415 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 RAD51DO75771 328 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 CPMP14384 443 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 NELFEP18615 380 aaKnown RBP4.74□□□□□ -1.65
SCN3A-203ENST00000409101 FOXN2P32314 431 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 CSNK1A1P48729 337 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 CHRNEQ04844 493 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 SLC3A1Q07837 685 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 PLGLAQ15195 96 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 TRIP6Q15654 476 aaKnown RBP4.74□□□□□ -1.65
SCN3A-203ENST00000409101 BCL2L15Q5TBC7 163 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 GPR107Q5VW38 600 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 LPCAT4Q643R3 524 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 ARHGAP11AQ6P4F7 1023 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 C3P1Q6ZMU1 363 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 PLCZ1Q86YW0 608 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 PLPP6Q8IY26 295 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 PAPD5Q8NDF8 572 aaKnown RBP4.74□□□□□ -1.65
SCN3A-203ENST00000409101 OR5L1Q8NGL2 311 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 TLCD1Q96CP7 247 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 PIP5K1AQ99755 562 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 PAIP1Q9H074 479 aaKnown RBP4.74□□□□□ -1.65
SCN3A-203ENST00000409101 CXCL16Q9H2A7 254 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 ABCB9Q9NP78 766 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 MBNL1Q9NR56 388 aaKnown RBP4.74□□□□□ -1.65
SCN3A-203ENST00000409101 RXFP3Q9NSD7 469 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 DECR2Q9NUI1 292 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 KLHL42Q9P2K6 505 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 MGAT4AQ9UM21 535 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 DHDHQ9UQ10 334 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 MMACHCQ9Y4U1 282 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 SNX11Q9Y5W9 270 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.74□□□□□ -1.65
SCN3A-203ENST00000409101 A0A1W2PPC1 479 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 OR5K3A6NET4 321 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 METTL12A8MUP2 240 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 L7N2F9 121 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 YY2O15391 372 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 AP1G1O43747 822 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 FMO6PO60774 539 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 SLC43A1O75387 559 aa4.74□□□□□ -1.65
SCN3A-203ENST00000409101 GJB3O75712 270 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms