RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 PLBD1Q6P4A8 553 aa16.8■□□□□ 0.28
SMPD4-202ENST00000409031 OR6V1Q8N148 313 aa16.8■□□□□ 0.28
SMPD4-202ENST00000409031 PNLDC1Q8NA58 520 aaKnown RBP16.8■□□□□ 0.28
SMPD4-202ENST00000409031 OR52P1PQ8NH57 321 aa16.8■□□□□ 0.28
SMPD4-202ENST00000409031 ECHDC3Q96DC8 303 aa16.8■□□□□ 0.28
SMPD4-202ENST00000409031 NOX3Q9HBY0 568 aa16.8■□□□□ 0.28
SMPD4-202ENST00000409031 YARS2Q9Y2Z4 477 aaKnown RBP16.8■□□□□ 0.28
SMPD4-202ENST00000409031 TYRP14679 529 aa16.8■□□□□ 0.28
SMPD4-202ENST00000409031 RPS26P62854 115 aaKnown RBP16.8■□□□□ 0.28
SMPD4-202ENST00000409031 CD276Q5ZPR3 534 aa16.8■□□□□ 0.28
SMPD4-202ENST00000409031 LCN9Q8WX39 176 aa16.8■□□□□ 0.28
SMPD4-202ENST00000409031 COPS3Q9UNS2 423 aa16.8■□□□□ 0.28
SMPD4-202ENST00000409031 GXYLT2A0PJZ3 443 aa16.8■□□□□ 0.28
SMPD4-202ENST00000409031 ZNF878C9JN71 531 aa16.8■□□□□ 0.28
SMPD4-202ENST00000409031 VIPR1P32241 457 aa16.8■□□□□ 0.28
SMPD4-202ENST00000409031 SLC8B1Q6J4K2 584 aa16.8■□□□□ 0.28
SMPD4-202ENST00000409031 CEP68Q76N32 757 aa16.8■□□□□ 0.28
SMPD4-202ENST00000409031 ACPTQ9BZG2 426 aa16.8■□□□□ 0.28
SMPD4-202ENST00000409031 OSGIN1Q9UJX0 560 aa16.8■□□□□ 0.28
SMPD4-202ENST00000409031 FBXL21Q9UKT6 434 aa16.8■□□□□ 0.28
SMPD4-202ENST00000409031 hCG_1807616A0A1W2PRN6 198 aa16.79■□□□□ 0.28
SMPD4-202ENST00000409031 POM121CA8CG34 1229 aa16.79■□□□□ 0.28
SMPD4-202ENST00000409031 EPHX1P07099 455 aa16.79■□□□□ 0.28
SMPD4-202ENST00000409031 ETV3P41162 512 aa16.79■□□□□ 0.28
SMPD4-202ENST00000409031 MGAT3Q09327 533 aa16.79■□□□□ 0.28
SMPD4-202ENST00000409031 OR51A7Q8NH64 312 aa16.79■□□□□ 0.28
SMPD4-202ENST00000409031 SPRYD4Q8WW59 207 aaPredicted RBP16.79■□□□□ 0.28
SMPD4-202ENST00000409031 ARPC5LQ9BPX5 153 aa16.79■□□□□ 0.28
SMPD4-202ENST00000409031 SLC12A9Q9BXP2 914 aa16.79■□□□□ 0.28
SMPD4-202ENST00000409031 PSPHP78330 225 aa16.79■□□□□ 0.28
SMPD4-202ENST00000409031 ZXDBP98169 803 aa16.79■□□□□ 0.28
SMPD4-202ENST00000409031 OR5W2Q8NH69 310 aa16.79■□□□□ 0.28
SMPD4-202ENST00000409031 BRIX1Q8TDN6 353 aaKnown RBP16.79■□□□□ 0.28
SMPD4-202ENST00000409031 EEF1E1-BLOC1S5C9J1V9 151 aa16.79■□□□□ 0.28
SMPD4-202ENST00000409031 ACP2P11117 423 aa16.79■□□□□ 0.28
SMPD4-202ENST00000409031 CTSEP14091 401 aa16.79■□□□□ 0.28
SMPD4-202ENST00000409031 IGFALSP35858 605 aa16.79■□□□□ 0.28
SMPD4-202ENST00000409031 MAGEA11P43364 429 aa16.79■□□□□ 0.28
SMPD4-202ENST00000409031 CLCN7P51798 805 aa16.79■□□□□ 0.28
SMPD4-202ENST00000409031 PIN1Q13526 163 aaPredicted RBP16.79■□□□□ 0.28
SMPD4-202ENST00000409031 DUSP6Q16828 381 aa16.79■□□□□ 0.28
SMPD4-202ENST00000409031 RAB11FIP2Q7L804 512 aa16.79■□□□□ 0.28
SMPD4-202ENST00000409031 KCTD20Q7Z5Y7 419 aa16.79■□□□□ 0.28
SMPD4-202ENST00000409031 THAP4Q8WY91 577 aa16.79■□□□□ 0.28
SMPD4-202ENST00000409031 TFGQ92734 400 aaPredicted RBP16.79■□□□□ 0.28
SMPD4-202ENST00000409031 PARP4Q9UKK3 1724 aaKnown RBP16.79■□□□□ 0.28
SMPD4-202ENST00000409031 POP7O75817 140 aaKnown RBP16.79■□□□□ 0.28
SMPD4-202ENST00000409031 NAA10P41227 235 aaPredicted RBP16.79■□□□□ 0.28
SMPD4-202ENST00000409031 FLI1Q01543 452 aaPredicted RBP16.79■□□□□ 0.28
SMPD4-202ENST00000409031 PCGF3Q3KNV8 242 aa16.79■□□□□ 0.28
SMPD4-202ENST00000409031 TCTE1Q5JU00 501 aa16.79■□□□□ 0.28
SMPD4-202ENST00000409031 Q6ZSR9 355 aa16.79■□□□□ 0.28
SMPD4-202ENST00000409031 FAM129CQ86XR2 697 aa16.79■□□□□ 0.28
SMPD4-202ENST00000409031 CPOQ8IVL8 374 aa16.79■□□□□ 0.28
SMPD4-202ENST00000409031 FBXO15Q8NCQ5 510 aaPredicted RBP16.79■□□□□ 0.28
SMPD4-202ENST00000409031 OR14K1Q8NGZ2 314 aa16.79■□□□□ 0.28
SMPD4-202ENST00000409031 OR2T11Q8NH01 316 aa16.79■□□□□ 0.28
SMPD4-202ENST00000409031 CPNE2Q96FN4 548 aaPredicted RBP16.79■□□□□ 0.28
SMPD4-202ENST00000409031 PHRF1Q9P1Y6 1649 aaKnown RBP16.78■□□□□ 0.28
SMPD4-202ENST00000409031 PRKCAP17252 672 aa16.78■□□□□ 0.28
SMPD4-202ENST00000409031 PRSS3P35030 304 aa16.78■□□□□ 0.28
SMPD4-202ENST00000409031 PREPP48147 710 aa16.78■□□□□ 0.28
SMPD4-202ENST00000409031 GIPRP48546 466 aa16.78■□□□□ 0.28
SMPD4-202ENST00000409031 ERVFC1P60507 584 aa16.78■□□□□ 0.28
SMPD4-202ENST00000409031 ARHGAP11AQ6P4F7 1023 aa16.78■□□□□ 0.28
SMPD4-202ENST00000409031 SMAP2Q8WU79 429 aaPredicted RBP16.78■□□□□ 0.28
SMPD4-202ENST00000409031 C2orf78A6NCI8 922 aa16.78■□□□□ 0.28
SMPD4-202ENST00000409031 DLSTP36957 453 aa16.78■□□□□ 0.28
SMPD4-202ENST00000409031 STK11Q15831 433 aa16.78■□□□□ 0.28
SMPD4-202ENST00000409031 SUSD1Q6UWL2 747 aa16.78■□□□□ 0.28
SMPD4-202ENST00000409031 LRRC56Q8IYG6 542 aaPredicted RBP16.78■□□□□ 0.28
SMPD4-202ENST00000409031 WDSUB1Q8N9V3 476 aa16.78■□□□□ 0.28
SMPD4-202ENST00000409031 YIPF6Q96EC8 236 aa16.78■□□□□ 0.28
SMPD4-202ENST00000409031 NEDD4LQ96PU5 975 aa16.78■□□□□ 0.28
SMPD4-202ENST00000409031 TMEM14AQ9Y6G1 99 aa16.78■□□□□ 0.28
SMPD4-202ENST00000409031 TXNL1O43396 289 aa16.78■□□□□ 0.28
SMPD4-202ENST00000409031 GMFGO60234 142 aa16.78■□□□□ 0.28
SMPD4-202ENST00000409031 SDC3O75056 442 aa16.78■□□□□ 0.28
SMPD4-202ENST00000409031 MT-ND4P03905 459 aa16.78■□□□□ 0.28
SMPD4-202ENST00000409031 TCRBP04435 133 aa16.78■□□□□ 0.28
SMPD4-202ENST00000409031 AMY2AP04746 511 aa16.78■□□□□ 0.28
SMPD4-202ENST00000409031 CSF1P09603 554 aa16.78■□□□□ 0.28
SMPD4-202ENST00000409031 PSMB1P20618 241 aaKnown RBP16.78■□□□□ 0.28
SMPD4-202ENST00000409031 RPS19P39019 145 aaKnown RBP16.78■□□□□ 0.28
SMPD4-202ENST00000409031 ODF4Q2M2E3 257 aa16.78■□□□□ 0.28
SMPD4-202ENST00000409031 IFNL1Q8IU54 200 aa16.78■□□□□ 0.28
SMPD4-202ENST00000409031 ST8SIA4Q92187 359 aa16.78■□□□□ 0.28
SMPD4-202ENST00000409031 HS6ST2Q96MM7 605 aa16.78■□□□□ 0.28
SMPD4-202ENST00000409031 MBOAT4Q96T53 435 aa16.78■□□□□ 0.28
SMPD4-202ENST00000409031 CNN2Q99439 309 aaKnown RBP16.78■□□□□ 0.28
SMPD4-202ENST00000409031 SOHLH2Q9NX45 425 aa16.78■□□□□ 0.28
SMPD4-202ENST00000409031 ADH1AP07327 375 aa16.78■□□□□ 0.28
SMPD4-202ENST00000409031 UGT2B7P16662 529 aa16.78■□□□□ 0.28
SMPD4-202ENST00000409031 GPR4P46093 362 aa16.78■□□□□ 0.28
SMPD4-202ENST00000409031 DEFA6Q01524 100 aa16.78■□□□□ 0.28
SMPD4-202ENST00000409031 ENPP2Q13822 863 aa16.78■□□□□ 0.28
SMPD4-202ENST00000409031 CTF1Q16619 201 aa16.78■□□□□ 0.28
SMPD4-202ENST00000409031 CDNFQ49AH0 187 aa16.78■□□□□ 0.28
SMPD4-202ENST00000409031 C3orf38Q5JPI3 329 aa16.78■□□□□ 0.28
SMPD4-202ENST00000409031 NUP54Q7Z3B4 507 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms