RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 RIPOR1Q6ZS17 1223 aa9.04□□□□□ -0.96
NIF3L1-202ENST00000409020 ABHD13Q7L211 337 aa9.04□□□□□ -0.96
NIF3L1-202ENST00000409020 GPSM1Q86YR5 675 aa9.04□□□□□ -0.96
NIF3L1-202ENST00000409020 CRLF3Q8IUI8 442 aa9.04□□□□□ -0.96
NIF3L1-202ENST00000409020 CCDC36Q8IYA8 594 aa9.04□□□□□ -0.96
NIF3L1-202ENST00000409020 BEST3Q8N1M1 668 aa9.04□□□□□ -0.96
NIF3L1-202ENST00000409020 CA13Q8N1Q1 262 aa9.04□□□□□ -0.96
NIF3L1-202ENST00000409020 PDPRQ8NCN5 879 aa9.04□□□□□ -0.96
NIF3L1-202ENST00000409020 OR2W6PQ8NHA6 318 aa9.04□□□□□ -0.96
NIF3L1-202ENST00000409020 FAR1Q8WVX9 515 aa9.04□□□□□ -0.96
NIF3L1-202ENST00000409020 HAS2Q92819 552 aa9.04□□□□□ -0.96
NIF3L1-202ENST00000409020 MAGEB18Q96M61 343 aa9.04□□□□□ -0.96
NIF3L1-202ENST00000409020 SIGLEC12Q96PQ1 595 aa9.04□□□□□ -0.96
NIF3L1-202ENST00000409020 UCN2Q96RP3 112 aa9.04□□□□□ -0.96
NIF3L1-202ENST00000409020 PIP5K1AQ99755 562 aa9.04□□□□□ -0.96
NIF3L1-202ENST00000409020 AIF1LQ9BQI0 150 aa9.04□□□□□ -0.96
NIF3L1-202ENST00000409020 CADM1Q9BY67 442 aaKnown RBP9.04□□□□□ -0.96
NIF3L1-202ENST00000409020 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.04□□□□□ -0.96
NIF3L1-202ENST00000409020 ALG9Q9H6U8 611 aa9.04□□□□□ -0.96
NIF3L1-202ENST00000409020 TIGARQ9NQ88 270 aa9.04□□□□□ -0.96
NIF3L1-202ENST00000409020 PLEKHB1Q9UF11 243 aaPredicted RBP9.04□□□□□ -0.96
NIF3L1-202ENST00000409020 TEKT2Q9UIF3 430 aa9.04□□□□□ -0.96
NIF3L1-202ENST00000409020 ZNF490Q9ULM2 529 aaPredicted RBP9.04□□□□□ -0.96
NIF3L1-202ENST00000409020 RAB26Q9ULW5 256 aa9.04□□□□□ -0.96
NIF3L1-202ENST00000409020 SCN2AQ99250 2005 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 OTOGQ6ZRI0 2925 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 ZNF98A6NK75 572 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 H3BSA7 217 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 CLDN1O95832 211 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 LDLRP01130 860 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 C1GALT1C1LP0DN25 315 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 POU2F1P14859 743 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 GRK2P25098 689 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 ECHS1P30084 290 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 PPP2R1BP30154 601 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 ARL1P40616 181 aaPredicted RBP9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 TDGF1P3P51864 188 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 KCNK10P57789 538 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 BTN3A2P78410 334 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 CD300CQ08708 224 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 BAMBIQ13145 260 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 RUNX2Q13950 521 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 PXDC1Q5TGL8 231 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 ZNF468Q5VIY5 522 aaPredicted RBP9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 ZNF324BQ6AW86 544 aaPredicted RBP9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 BRICD5Q6PL45 260 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 TMIGD1Q6UXZ0 262 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 BNC2Q6ZN30 1099 aaPredicted RBP9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 FAM47EQ6ZV65 393 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 CYS1Q717R9 158 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 ST6GALNAC3Q8NDV1 305 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 PSD4Q8NDX1 1056 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 PLPP5Q8NEB5 264 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 OR6S1Q8NH40 331 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 ZNF420Q8TAQ5 688 aaPredicted RBP9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 TBC1D15Q8TC07 691 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 KCTD4Q8WVF5 259 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 TMEM80Q96HE8 168 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 HS6ST2Q96MM7 605 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 OR1F2PQ96R84 312 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 CCDC106Q9BWC9 280 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 TXLNGYQ9BZA5 131 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 NECTIN3Q9NQS3 549 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 AGPAT4Q9NRZ5 378 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 WWOXQ9NZC7 414 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 TXNDC16Q9P2K2 825 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 C19orf25Q9UFG5 118 aaPredicted RBP9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 OSGIN2Q9Y236 505 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 EIF3LQ9Y262 564 aaKnown RBP9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 DTX4Q9Y2E6 619 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 CBY1Q9Y3M2 126 aa9.03□□□□□ -0.96
NIF3L1-202ENST00000409020 MYO9AB2RTY4 2548 aa9.02□□□□□ -0.96
NIF3L1-202ENST00000409020 MYOCOSA0A1B0GUC4 107 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 LRIT2A6NDA9 550 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 OR5H15A6NDH6 313 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 A8MUA0 341 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 MAGEB17A8MXT2 336 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 UBXN8O00124 270 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 PCDH17O14917 1159 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 PRMT3O60678 531 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 SH3BGRLO75368 114 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 SPAG7O75391 227 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 CIB2O75838 187 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 SERPINA6P08185 405 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 MST1P26927 711 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 GGT5P36269 586 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 NKX2-5P52952 324 aaPredicted RBP9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 TPTEP56180 551 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 OR4D2P58180 307 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 SLC26A5P58743 744 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 GALK2Q01415 458 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 DOC2AQ14183 400 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 ACER2Q5QJU3 275 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 ABHD17BQ5VST6 288 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 SPINK14Q6IE38 97 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 H3F3CQ6NXT2 135 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 LYPD8Q6UX82 237 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 LINC00299Q6ZSB3 139 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 ISCA2Q86U28 154 aa9.02□□□□□ -0.97
NIF3L1-202ENST00000409020 CENPLQ8N0S6 344 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms