RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 HMGN4O00479 90 aa8.65□□□□□ -1.02
HPS4-203ENST00000402105 PLPP1O14494 284 aa8.65□□□□□ -1.02
HPS4-203ENST00000402105 LANCL1O43813 399 aa8.65□□□□□ -1.02
HPS4-203ENST00000402105 RECKO95980 971 aa8.65□□□□□ -1.02
HPS4-203ENST00000402105 ELK1P19419 428 aa8.65□□□□□ -1.02
HPS4-203ENST00000402105 PRKACBP22694 351 aa8.65□□□□□ -1.02
HPS4-203ENST00000402105 MLLT3P42568 568 aaPredicted RBP8.65□□□□□ -1.02
HPS4-203ENST00000402105 RRAS2P62070 204 aaPredicted RBP8.65□□□□□ -1.02
HPS4-203ENST00000402105 PPP3R1P63098 170 aa8.65□□□□□ -1.02
HPS4-203ENST00000402105 LY6G5CQ5SRR4 150 aa8.65□□□□□ -1.02
HPS4-203ENST00000402105 ZNF770Q6IQ21 691 aaPredicted RBP8.65□□□□□ -1.02
HPS4-203ENST00000402105 GDPGP1Q6ZNW5 385 aa8.65□□□□□ -1.02
HPS4-203ENST00000402105 ESPNLQ6ZVH7 1005 aa8.65□□□□□ -1.02
HPS4-203ENST00000402105 CHMP1BQ7LBR1 199 aa8.65□□□□□ -1.02
HPS4-203ENST00000402105 GPR155Q7Z3F1 870 aa8.65□□□□□ -1.02
HPS4-203ENST00000402105 LUZP2Q86TE4 346 aa8.65□□□□□ -1.02
HPS4-203ENST00000402105 KRT78Q8N1N4 520 aa8.65□□□□□ -1.02
HPS4-203ENST00000402105 OR56A3Q8NH54 315 aa8.65□□□□□ -1.02
HPS4-203ENST00000402105 ING5Q8WYH8 240 aa8.65□□□□□ -1.02
HPS4-203ENST00000402105 NARFLQ9H6Q4 476 aa8.65□□□□□ -1.02
HPS4-203ENST00000402105 ISG20L2Q9H9L3 353 aaKnown RBP8.65□□□□□ -1.02
HPS4-203ENST00000402105 SLC28A3Q9HAS3 691 aa8.65□□□□□ -1.02
HPS4-203ENST00000402105 TM7SF3Q9NS93 570 aa8.65□□□□□ -1.02
HPS4-203ENST00000402105 GON4LQ3T8J9 2241 aa8.65□□□□□ -1.02
HPS4-203ENST00000402105 A0A0B4J203 849 aa8.65□□□□□ -1.02
HPS4-203ENST00000402105 SHISA3A0PJX4 238 aa8.65□□□□□ -1.02
HPS4-203ENST00000402105 GABRPO00591 440 aa8.65□□□□□ -1.02
HPS4-203ENST00000402105 SOCS6O14544 535 aa8.65□□□□□ -1.02
HPS4-203ENST00000402105 MAGEB4O15481 346 aaPredicted RBP8.65□□□□□ -1.02
HPS4-203ENST00000402105 RPL3P39023 403 aaKnown RBP8.65□□□□□ -1.02
HPS4-203ENST00000402105 PNLIPRP1P54315 467 aa8.65□□□□□ -1.02
HPS4-203ENST00000402105 OR10A3P58181 314 aa8.65□□□□□ -1.02
HPS4-203ENST00000402105 SNRPGP62308 76 aaKnown RBP8.65□□□□□ -1.02
HPS4-203ENST00000402105 CAP1Q01518 475 aa8.65□□□□□ -1.02
HPS4-203ENST00000402105 KCNC3Q14003 757 aa8.65□□□□□ -1.02
HPS4-203ENST00000402105 TOR1AIP1Q5JTV8 583 aa8.65□□□□□ -1.02
HPS4-203ENST00000402105 MZT2AQ6P582 158 aa8.65□□□□□ -1.02
HPS4-203ENST00000402105 TMEM107Q6UX40 140 aa8.65□□□□□ -1.02
HPS4-203ENST00000402105 RNF165Q6ZSG1 346 aa8.65□□□□□ -1.02
HPS4-203ENST00000402105 VRK2Q86Y07 508 aa8.65□□□□□ -1.02
HPS4-203ENST00000402105 GON7Q9BXV9 100 aa8.65□□□□□ -1.02
HPS4-203ENST00000402105 SLC46A2Q9BY10 475 aa8.65□□□□□ -1.02
HPS4-203ENST00000402105 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.65□□□□□ -1.03
HPS4-203ENST00000402105 A0A1W2PS29 197 aa8.65□□□□□ -1.03
HPS4-203ENST00000402105 AGAP14A8MT82 685 aa8.65□□□□□ -1.03
HPS4-203ENST00000402105 TEX28O15482 410 aa8.65□□□□□ -1.03
HPS4-203ENST00000402105 NUPL2O15504 423 aaKnown RBP8.65□□□□□ -1.03
HPS4-203ENST00000402105 HRGP04196 525 aa8.65□□□□□ -1.03
HPS4-203ENST00000402105 TIMP2P16035 220 aa8.65□□□□□ -1.03
HPS4-203ENST00000402105 SHC1P29353 583 aa8.65□□□□□ -1.03
HPS4-203ENST00000402105 HMGA2P52926 109 aa8.65□□□□□ -1.03
HPS4-203ENST00000402105 EEF1A2Q05639 463 aaKnown RBP8.65□□□□□ -1.03
HPS4-203ENST00000402105 ZNF311Q5JNZ3 666 aa8.65□□□□□ -1.03
HPS4-203ENST00000402105 PLBD1Q6P4A8 553 aa8.65□□□□□ -1.03
HPS4-203ENST00000402105 SLC36A4Q6YBV0 504 aa8.65□□□□□ -1.03
HPS4-203ENST00000402105 CPOQ8IVL8 374 aa8.65□□□□□ -1.03
HPS4-203ENST00000402105 HHIPQ96QV1 700 aa8.65□□□□□ -1.03
HPS4-203ENST00000402105 ZSCAN5AQ9BUG6 496 aa8.65□□□□□ -1.03
HPS4-203ENST00000402105 P2RX2Q9UBL9 471 aa8.65□□□□□ -1.03
HPS4-203ENST00000402105 PPIEQ9UNP9 301 aaKnown RBP8.65□□□□□ -1.03
HPS4-203ENST00000402105 PCM1Q15154 2024 aa8.64□□□□□ -1.03
HPS4-203ENST00000402105 AKAP8O43823 692 aaKnown RBP8.64□□□□□ -1.03
HPS4-203ENST00000402105 B4GALT2O60909 372 aa8.64□□□□□ -1.03
HPS4-203ENST00000402105 CPEP16870 476 aa8.64□□□□□ -1.03
HPS4-203ENST00000402105 CCR6P51684 374 aa8.64□□□□□ -1.03
HPS4-203ENST00000402105 PCBP3P57721 371 aaKnown RBP8.64□□□□□ -1.03
HPS4-203ENST00000402105 SMIM11AP58511 58 aa8.64□□□□□ -1.03
HPS4-203ENST00000402105 ADAM15Q13444 863 aa8.64□□□□□ -1.03
HPS4-203ENST00000402105 CAMK1Q14012 370 aa8.64□□□□□ -1.03
HPS4-203ENST00000402105 SLC9B2Q86UD5 537 aa8.64□□□□□ -1.03
HPS4-203ENST00000402105 ADGRF3Q8IZF5 1079 aa8.64□□□□□ -1.03
HPS4-203ENST00000402105 CLDN22Q8N7P3 220 aa8.64□□□□□ -1.03
HPS4-203ENST00000402105 PDXPQ96GD0 296 aa8.64□□□□□ -1.03
HPS4-203ENST00000402105 THAP7Q9BT49 309 aaPredicted RBP8.64□□□□□ -1.03
HPS4-203ENST00000402105 C1QTNF6Q9BXI9 259 aa8.64□□□□□ -1.03
HPS4-203ENST00000402105 MYNNQ9NPC7 610 aa8.64□□□□□ -1.03
HPS4-203ENST00000402105 DIMT1Q9UNQ2 313 aaKnown RBP8.64□□□□□ -1.03
HPS4-203ENST00000402105 KCNE3Q9Y6H6 103 aa8.64□□□□□ -1.03
HPS4-203ENST00000402105 IGLV3-16A0A075B6K0 115 aa8.64□□□□□ -1.03
HPS4-203ENST00000402105 A0A0A6YYJ9 748 aa8.64□□□□□ -1.03
HPS4-203ENST00000402105 HLA-DPB1P04440 258 aa8.64□□□□□ -1.03
HPS4-203ENST00000402105 ALPPP05187 535 aa8.64□□□□□ -1.03
HPS4-203ENST00000402105 GYPBP06028 91 aa8.64□□□□□ -1.03
HPS4-203ENST00000402105 KELP23276 732 aa8.64□□□□□ -1.03
HPS4-203ENST00000402105 SLC1A3P43003 542 aa8.64□□□□□ -1.03
HPS4-203ENST00000402105 KCNJ5P48544 419 aa8.64□□□□□ -1.03
HPS4-203ENST00000402105 VSX2P58304 361 aaPredicted RBP8.64□□□□□ -1.03
HPS4-203ENST00000402105 POU6F2P78424 691 aaPredicted RBP8.64□□□□□ -1.03
HPS4-203ENST00000402105 NTRK2Q16620 822 aa8.64□□□□□ -1.03
HPS4-203ENST00000402105 FAM26DQ5JW98 314 aa8.64□□□□□ -1.03
HPS4-203ENST00000402105 SFRP4Q6FHJ7 346 aaPredicted RBP8.64□□□□□ -1.03
HPS4-203ENST00000402105 BHLHB9Q6PI77 547 aa8.64□□□□□ -1.03
HPS4-203ENST00000402105 RPTNQ6XPR3 784 aa8.64□□□□□ -1.03
HPS4-203ENST00000402105 PLEKHM3Q6ZWE6 761 aa8.64□□□□□ -1.03
HPS4-203ENST00000402105 NRMQ8IXM6 262 aa8.64□□□□□ -1.03
HPS4-203ENST00000402105 OR4M1Q8NGD0 313 aa8.64□□□□□ -1.03
HPS4-203ENST00000402105 CEP76Q8TAP6 659 aa8.64□□□□□ -1.03
HPS4-203ENST00000402105 OVCA2Q8WZ82 227 aa8.64□□□□□ -1.03
HPS4-203ENST00000402105 TCEAL4Q96EI5 215 aa8.64□□□□□ -1.03
HPS4-203ENST00000402105 SENP5Q96HI0 755 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms