RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 MROH1Q8NDA8 1641 aa13.08□□□□□ -0.32
VAPA-202ENST00000400000 SORBS2O94875 1100 aaKnown RBP13.08□□□□□ -0.32
VAPA-202ENST00000400000 IFNA5P01569 189 aa13.08□□□□□ -0.32
VAPA-202ENST00000400000 SNRPD2P62316 118 aaKnown RBP13.08□□□□□ -0.32
VAPA-202ENST00000400000 KRBOX4Q5JUW0 171 aa13.08□□□□□ -0.32
VAPA-202ENST00000400000 SHQ1Q6PI26 577 aaKnown RBP13.08□□□□□ -0.32
VAPA-202ENST00000400000 UEVLDQ8IX04 471 aa13.08□□□□□ -0.32
VAPA-202ENST00000400000 TMEM40Q8WWA1 233 aa13.08□□□□□ -0.32
VAPA-202ENST00000400000 NELL2Q99435 816 aa13.08□□□□□ -0.32
VAPA-202ENST00000400000 DNAJB11Q9UBS4 358 aa13.08□□□□□ -0.32
VAPA-202ENST00000400000 A0A1W2PPW3 197 aa13.08□□□□□ -0.32
VAPA-202ENST00000400000 GCDHQ92947 438 aaPredicted RBP13.08□□□□□ -0.32
VAPA-202ENST00000400000 TCEAL4Q96EI5 215 aa13.08□□□□□ -0.32
VAPA-202ENST00000400000 ZC3HAV1LQ96H79 300 aaKnown RBP13.08□□□□□ -0.32
VAPA-202ENST00000400000 RGCCQ9H4X1 137 aa13.08□□□□□ -0.32
VAPA-202ENST00000400000 SLC39A1Q9NY26 324 aa13.08□□□□□ -0.32
VAPA-202ENST00000400000 EXOSC1Q9Y3B2 195 aaKnown RBP13.08□□□□□ -0.32
VAPA-202ENST00000400000 SRRM3A6NNA2 597 aaPredicted RBP13.08□□□□□ -0.32
VAPA-202ENST00000400000 C17orf105B2RV13 164 aa13.08□□□□□ -0.32
VAPA-202ENST00000400000 SLC10A3P09131 477 aa13.08□□□□□ -0.32
VAPA-202ENST00000400000 F8A1P23610 371 aa13.08□□□□□ -0.32
VAPA-202ENST00000400000 PSMB10P40306 273 aa13.08□□□□□ -0.32
VAPA-202ENST00000400000 FOLR3P41439 243 aa13.08□□□□□ -0.32
VAPA-202ENST00000400000 PTH2RP49190 550 aa13.08□□□□□ -0.32
VAPA-202ENST00000400000 SMIM14Q96QK8 99 aa13.08□□□□□ -0.32
VAPA-202ENST00000400000 MICU1Q9BPX6 476 aa13.08□□□□□ -0.32
VAPA-202ENST00000400000 ALOXE3Q9BYJ1 711 aa13.08□□□□□ -0.32
VAPA-202ENST00000400000 SLC25A18Q9H1K4 315 aa13.08□□□□□ -0.32
VAPA-202ENST00000400000 NELFAQ9H3P2 528 aa13.08□□□□□ -0.32
VAPA-202ENST00000400000 PCDHGA8Q9Y5G5 932 aa13.08□□□□□ -0.32
VAPA-202ENST00000400000 DCDC2BA2VCK2 349 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 KIAA0355O15063 1070 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 RP2O75695 350 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 ZNF28P17035 718 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 IL32P24001 234 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 APLNRP35414 380 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 SLC35G1Q2M3R5 365 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 UNC50Q53HI1 259 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 AVL9Q8NBF6 648 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 SAMD8Q96LT4 415 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 ACTR6Q9GZN1 396 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 ZNF225Q9UK10 706 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 AGAP5A6NIR3 686 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 GPR39O43194 453 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 NR0B2Q15466 257 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 CLEC1AQ8NC01 280 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 SFXN2Q96NB2 322 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 COQ4Q9Y3A0 265 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 SDK1Q7Z5N4 2213 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 LOC102723532A0A0G2JNH3 316 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 ARGFXA6NJG6 315 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 GYPBP06028 91 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 DRD5P21918 477 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 AQP2P41181 271 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 MC3RP41968 323 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 NKX2-5P52952 324 aaPredicted RBP13.07□□□□□ -0.32
VAPA-202ENST00000400000 GRM7Q14831 915 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 EXOSC7Q15024 291 aaKnown RBP13.07□□□□□ -0.32
VAPA-202ENST00000400000 ZBED5Q49AG3 693 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 NDUFAF5Q5TEU4 345 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 LYSMD4Q5XG99 296 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 SDR9C7Q8NEX9 313 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 MSANTD3Q96H12 275 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 ARL5BQ96KC2 179 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 HIF1ANQ9NWT6 349 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 OR14J1Q9UGF5 321 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 GXYLT2A0PJZ3 443 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 H3BUI4 141 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 FGF3P11487 239 aaPredicted RBP13.07□□□□□ -0.32
VAPA-202ENST00000400000 NDUFV2P19404 249 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 XCR1P46094 333 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 SLC6A11P48066 632 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 FGL2Q14314 439 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 NPY5RQ15761 445 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 TP53I3Q53FA7 332 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 KCTD18Q6PI47 426 aaPredicted RBP13.07□□□□□ -0.32
VAPA-202ENST00000400000 OR9Q2Q8NGE9 314 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 ZMYND19Q96E35 227 aaPredicted RBP13.07□□□□□ -0.32
VAPA-202ENST00000400000 DOHHQ9BU89 302 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 SYT4Q9H2B2 425 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 HSD3B7Q9H2F3 369 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 MITFO75030 526 aaPredicted RBP13.07□□□□□ -0.32
VAPA-202ENST00000400000 NXPH3O95157 252 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 PROS1P07225 676 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 IL4RP24394 825 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 ZNF136P52737 540 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 ZNF33BQ06732 778 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 NRMQ8IXM6 262 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 C16orf78Q8WTQ4 265 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 ZNF689Q96CS4 500 aaPredicted RBP13.07□□□□□ -0.32
VAPA-202ENST00000400000 SLC45A3Q96JT2 553 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 MYRFLQ96LU7 910 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 TMEM246Q9BRR3 403 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 KCNIP1Q9NZI2 227 aa13.07□□□□□ -0.32
VAPA-202ENST00000400000 ANKRD28O15084 1053 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 PTAFRP25105 342 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 THBS2P35442 1172 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 SGSHP51688 502 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 PSPHP78330 225 aa13.06□□□□□ -0.32
VAPA-202ENST00000400000 MAT1AQ00266 395 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms