RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 OR4N2Q8NGD1 307 aa12.94□□□□□ -0.34
HLA-DQB1-202ENST00000399079 OMA1Q96E52 524 aa12.94□□□□□ -0.34
HLA-DQB1-202ENST00000399079 HSPBAP1Q96EW2 488 aa12.94□□□□□ -0.34
HLA-DQB1-202ENST00000399079 ZNF764Q96H86 408 aaPredicted RBP12.94□□□□□ -0.34
HLA-DQB1-202ENST00000399079 JSRP1Q96MG2 331 aaPredicted RBP12.94□□□□□ -0.34
HLA-DQB1-202ENST00000399079 BTBD9Q96Q07 612 aa12.94□□□□□ -0.34
HLA-DQB1-202ENST00000399079 CNIH4Q9P003 139 aa12.94□□□□□ -0.34
HLA-DQB1-202ENST00000399079 TINAGQ9UJW2 476 aa12.94□□□□□ -0.34
HLA-DQB1-202ENST00000399079 C19orf53Q9UNZ5 99 aaPredicted RBP12.94□□□□□ -0.34
HLA-DQB1-202ENST00000399079 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.94□□□□□ -0.34
HLA-DQB1-202ENST00000399079 SPTAN1Q13813 2472 aaKnown RBP12.94□□□□□ -0.34
HLA-DQB1-202ENST00000399079 A0A1B0GTH9 108 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 FRG2CA6NGY1 282 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 CAPN14A8MX76 684 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 TP53I11O14683 189 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 SCAMP2O15127 329 aaKnown RBP12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 ACOX3O15254 700 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 TBX19O60806 448 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 SNNO75324 88 aaPredicted RBP12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 PPM1BO75688 479 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 SNUPNO95149 360 aaKnown RBP12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 CELA3AP09093 270 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 RFPL3SP0C7P2 107 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 G6PDP11413 515 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 FRKP42685 505 aaPredicted RBP12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 MANFP55145 182 aaKnown RBP12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 DCAF7P61962 342 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 PSG6Q00889 435 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 RBPJQ06330 500 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 C3AR1Q16581 482 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 SLC22A16Q86VW1 577 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 OR2L13Q8N349 312 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 SPPL2AQ8TCT8 520 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 TMBIM1Q969X1 311 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 ATP6V1G3Q96LB4 118 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 RILPQ96NA2 401 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 PSMG3-AS1Q96PY0 264 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 DOHHQ9BU89 302 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 MANSC1Q9H8J5 431 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 ZDHHC11Q9H8X9 412 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 IL1RL2Q9HB29 575 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 DDX18Q9NVP1 670 aaKnown RBP12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 ARGLU1Q9NWB6 273 aaPredicted RBP12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 MARCOQ9UEW3 520 aaPredicted RBP12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 DIDO1Q9BTC0 2240 aaKnown RBP12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 NINQ8N4C6 2090 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 WIPF3A6NGB9 483 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 LRRC3CA6NJW4 275 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 ACOT7O00154 380 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 TO15178 435 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 UGT2B11O75310 529 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 PSMG1O95456 288 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 KITP10721 976 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 LAMP1P11279 417 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 PRPS2P11908 318 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 ABOP16442 354 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 HPCAL1P37235 193 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 CASP3P42574 277 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 CDK9P50750 372 aaKnown RBP12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 DIO3P55073 304 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 EMX2Q04743 252 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 ZNF155Q12901 538 aaPredicted RBP12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 BNC2Q6ZN30 1099 aaPredicted RBP12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 HDXQ7Z353 690 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 R3HCC1LQ7Z5L2 792 aaKnown RBP12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 SLC44A2Q8IWA5 706 aaPredicted RBP12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 SLC34A3Q8N130 599 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 HGDQ93099 445 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 MTERF3Q96E29 417 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 ZBED6CLQ96FA7 236 aaPredicted RBP12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 NODALQ96S42 347 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 PLSCR2Q9NRY7 297 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 THAP1Q9NVV9 213 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 ATP6V1HQ9UI12 483 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 EIF3LQ9Y262 564 aaKnown RBP12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 ZNF835Q9Y2P0 537 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 LIPGQ9Y5X9 500 aa12.93□□□□□ -0.34
HLA-DQB1-202ENST00000399079 ZNF407Q9C0G0 2248 aa12.92□□□□□ -0.34
HLA-DQB1-202ENST00000399079 ANKRD33BA6NCL7 494 aa12.92□□□□□ -0.34
HLA-DQB1-202ENST00000399079 C2orf72A6NCS6 295 aa12.92□□□□□ -0.34
HLA-DQB1-202ENST00000399079 ZG16O60844 167 aa12.92□□□□□ -0.34
HLA-DQB1-202ENST00000399079 COQ9O75208 318 aa12.92□□□□□ -0.34
HLA-DQB1-202ENST00000399079 REM1O75628 298 aa12.92□□□□□ -0.34
HLA-DQB1-202ENST00000399079 SLITRK5O94991 958 aa12.92□□□□□ -0.34
HLA-DQB1-202ENST00000399079 NAGAP17050 411 aa12.92□□□□□ -0.34
HLA-DQB1-202ENST00000399079 GPC1P35052 558 aa12.92□□□□□ -0.34
HLA-DQB1-202ENST00000399079 CA7P43166 264 aa12.92□□□□□ -0.34
HLA-DQB1-202ENST00000399079 HYAL4Q2M3T9 481 aa12.92□□□□□ -0.34
HLA-DQB1-202ENST00000399079 FNDC7Q5VTL7 733 aa12.92□□□□□ -0.34
HLA-DQB1-202ENST00000399079 ATG16L1Q676U5 607 aa12.92□□□□□ -0.34
HLA-DQB1-202ENST00000399079 MYO7BQ6PIF6 2116 aa12.92□□□□□ -0.34
HLA-DQB1-202ENST00000399079 C3P1Q6ZMU1 363 aa12.92□□□□□ -0.34
HLA-DQB1-202ENST00000399079 RIMKLAQ8IXN7 391 aa12.92□□□□□ -0.34
HLA-DQB1-202ENST00000399079 RELTQ969Z4 430 aa12.92□□□□□ -0.34
HLA-DQB1-202ENST00000399079 EFHD2Q96C19 240 aaPredicted RBP12.92□□□□□ -0.34
HLA-DQB1-202ENST00000399079 ADOQ96SZ5 270 aa12.92□□□□□ -0.34
HLA-DQB1-202ENST00000399079 ANGPTL4Q9BY76 406 aa12.92□□□□□ -0.34
HLA-DQB1-202ENST00000399079 MEAF6Q9HAF1 191 aa12.92□□□□□ -0.34
HLA-DQB1-202ENST00000399079 ZFP64Q9NPA5 681 aa12.92□□□□□ -0.34
HLA-DQB1-202ENST00000399079 EQTNQ9NQ60 294 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms