RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 RHEBL1Q8TAI7 183 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 EXT2Q93063 718 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 PIGTQ969N2 578 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 PIP5K1AQ99755 562 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 TRIM31Q9BZY9 425 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 ACBD3Q9H3P7 528 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 METTL7AQ9H8H3 244 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 ACTR8Q9H981 624 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 FRRS1LQ9P0K9 344 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 EXO1Q9UQ84 846 aaKnown RBP7.97□□□□□ -1.13
CAPN3-208ENST00000397204 EIF3LQ9Y262 564 aaKnown RBP7.97□□□□□ -1.13
CAPN3-208ENST00000397204 ACOT9Q9Y305 439 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 SNX24Q9Y343 169 aa7.97□□□□□ -1.13
CAPN3-208ENST00000397204 MED12Q93074 2177 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 TCRBV9S1A1TA0A576 114 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 ACOX3O15254 700 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 PPM1BO75688 479 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 SEMA3DO95025 777 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 AIFM1O95831 613 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 LY6G6DO95868 133 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 RHOXF2BP0C7M4 288 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 MTHFD2P13995 350 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 PORP16435 677 aaPredicted RBP7.96□□□□□ -1.14
CAPN3-208ENST00000397204 SLCO1A2P46721 670 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 CPA2P48052 419 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 PIK3CGP48736 1102 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 DIO3P55073 304 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 MAP4K2Q12851 820 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 FOXF2Q12947 444 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 DLG1Q12959 904 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 CPSF6Q16630 551 aaKnown RBP eCLIP7.96□□□□□ -1.14
CAPN3-208ENST00000397204 FAM83EQ2M2I3 478 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 DCST1Q5T197 706 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 C6orf163Q5TEZ5 329 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 OR52E8Q6IFG1 317 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 METTL2BQ6P1Q9 378 aaKnown RBP7.96□□□□□ -1.14
CAPN3-208ENST00000397204 ANGPTL8Q6UXH0 198 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 Q71RC1 249 aaPredicted RBP7.96□□□□□ -1.14
CAPN3-208ENST00000397204 TAOK1Q7L7X3 1001 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 NUDT13Q86X67 352 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 P3H2Q8IVL5 708 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 TRIM42Q8IWZ5 723 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 L3MBTL4Q8NA19 623 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 TRPC4APQ8TEL6 797 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 UCN3Q969E3 161 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 INTS12Q96CB8 462 aaKnown RBP7.96□□□□□ -1.14
CAPN3-208ENST00000397204 NXNL1Q96CM4 212 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 DTNBP1Q96EV8 351 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 SERPINI1Q99574 410 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 TUBA1CQ9BQE3 449 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 IPPKQ9H8X2 491 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 SAYSD1Q9NPB0 183 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 GALNT8Q9NY28 637 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 AHSPQ9NZD4 102 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 RNF14Q9UBS8 474 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 ADAM29Q9UKF5 820 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 PSME2Q9UL46 239 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 MRPS18CQ9Y3D5 142 aaKnown RBP7.96□□□□□ -1.14
CAPN3-208ENST00000397204 TNPO3Q9Y5L0 923 aaKnown RBP7.96□□□□□ -1.14
CAPN3-208ENST00000397204 ARHGAP21Q5T5U3 1957 aa7.96□□□□□ -1.14
CAPN3-208ENST00000397204 A0A1W2PPR1 153 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 SMPD2O60906 423 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 GUCY1B2O75343 617 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 CLDN9O95484 217 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 CRHP06850 196 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 CT62P0C5K7 136 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 CPMP14384 443 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 FPR1P21462 350 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 NT5EP21589 574 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 DRD5P21918 477 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 GPX3P22352 226 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 SOX18P35713 384 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 PAFAH1B1P43034 410 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 PPICP45877 212 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 NEK2P51955 445 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 ALDH18A1P54886 795 aaKnown RBP7.95□□□□□ -1.14
CAPN3-208ENST00000397204 MGAT2Q10469 447 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 CALCOCO2Q13137 446 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 ACAP2Q15057 778 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 POU4F3Q15319 338 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 BCL2A1Q16548 175 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 PFKFB4Q16877 469 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 C10orf62Q5T681 223 aaPredicted RBP7.95□□□□□ -1.14
CAPN3-208ENST00000397204 AAGABQ6PD74 315 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 PAGE2Q7Z2X7 111 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 LUZP2Q86TE4 346 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 CTAGE3PQ8IX95 158 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 WDSUB1Q8N9V3 476 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 OR14L1PQ8NHC6 308 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 WDR20Q8TBZ3 569 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 SLC44A1Q8WWI5 657 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 HGDQ93099 445 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 LCORQ96JN0 433 aaPredicted RBP7.95□□□□□ -1.14
CAPN3-208ENST00000397204 COX4I2Q96KJ9 171 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 ERP44Q9BS26 406 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 BDH2Q9BUT1 245 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 OR2B2Q9GZK3 357 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 NXF5Q9H1B4 397 aaKnown RBP7.95□□□□□ -1.14
CAPN3-208ENST00000397204 WHRNQ9P202 907 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 PACSIN3Q9UKS6 424 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms