RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 RNF11Q9Y3C5 154 aa14.9□□□□□ -0.02
CLTA-203ENST00000396603 ARHGAP21Q5T5U3 1957 aa14.89□□□□□ -0.03
CLTA-203ENST00000396603 EML6Q6ZMW3 1958 aa14.89□□□□□ -0.03
CLTA-203ENST00000396603 C1orf226A1L170 272 aa14.89□□□□□ -0.03
CLTA-203ENST00000396603 LRRC14BA6NHZ5 514 aa14.89□□□□□ -0.03
CLTA-203ENST00000396603 G3V2L1 256 aa14.89□□□□□ -0.03
CLTA-203ENST00000396603 PGRMC2O15173 223 aa14.89□□□□□ -0.03
CLTA-203ENST00000396603 TM9SF1O15321 606 aa14.89□□□□□ -0.03
CLTA-203ENST00000396603 TRAPPC6AO75865 159 aa14.89□□□□□ -0.03
CLTA-203ENST00000396603 ATP1B1P05026 303 aa14.89□□□□□ -0.03
CLTA-203ENST00000396603 EPXP11678 715 aa14.89□□□□□ -0.03
CLTA-203ENST00000396603 CPMP14384 443 aa14.89□□□□□ -0.03
CLTA-203ENST00000396603 PORP16435 677 aaPredicted RBP14.89□□□□□ -0.03
CLTA-203ENST00000396603 CTSSP25774 331 aa14.89□□□□□ -0.03
CLTA-203ENST00000396603 ABCD3P28288 659 aa14.89□□□□□ -0.03
CLTA-203ENST00000396603 XKP51811 444 aa14.89□□□□□ -0.03
CLTA-203ENST00000396603 ZNF136P52737 540 aa14.89□□□□□ -0.03
CLTA-203ENST00000396603 PKNOX1P55347 436 aa14.89□□□□□ -0.03
CLTA-203ENST00000396603 DCAF7P61962 342 aa14.89□□□□□ -0.03
CLTA-203ENST00000396603 EEF1A1P68104 462 aaKnown RBP14.89□□□□□ -0.03
CLTA-203ENST00000396603 PSPHP78330 225 aa14.89□□□□□ -0.03
CLTA-203ENST00000396603 MAP4K2Q12851 820 aa14.89□□□□□ -0.03
CLTA-203ENST00000396603 IFT88Q13099 833 aa14.89□□□□□ -0.03
CLTA-203ENST00000396603 RCAN2Q14206 197 aa14.89□□□□□ -0.03
CLTA-203ENST00000396603 EEF1A1P5Q5VTE0 462 aa14.89□□□□□ -0.03
CLTA-203ENST00000396603 LIPMQ5VYY2 423 aa14.89□□□□□ -0.03
CLTA-203ENST00000396603 TTC19Q6DKK2 380 aaPredicted RBP14.89□□□□□ -0.03
CLTA-203ENST00000396603 SLC30A6Q6NXT4 461 aa14.89□□□□□ -0.03
CLTA-203ENST00000396603 PAMR1Q6UXH9 720 aa14.89□□□□□ -0.03
CLTA-203ENST00000396603 NUP54Q7Z3B4 507 aa14.89□□□□□ -0.03
CLTA-203ENST00000396603 VWA5B2Q8N398 1253 aa14.89□□□□□ -0.03
CLTA-203ENST00000396603 CCNYL1Q8N7R7 359 aa14.89□□□□□ -0.03
CLTA-203ENST00000396603 GOLGA6L1Q8N7Z2 621 aa14.89□□□□□ -0.03
CLTA-203ENST00000396603 NRGNQ92686 78 aa14.89□□□□□ -0.03
CLTA-203ENST00000396603 UCN2Q96RP3 112 aa14.89□□□□□ -0.03
CLTA-203ENST00000396603 ZNF382Q96SR6 550 aa14.89□□□□□ -0.03
CLTA-203ENST00000396603 TRMOQ9BU70 441 aa14.89□□□□□ -0.03
CLTA-203ENST00000396603 OXSMQ9NWU1 459 aa14.89□□□□□ -0.03
CLTA-203ENST00000396603 SNX6Q9UNH7 406 aa14.89□□□□□ -0.03
CLTA-203ENST00000396603 TUBAL3A6NHL2 446 aa14.88□□□□□ -0.03
CLTA-203ENST00000396603 WASHC1A8K0Z3 465 aa14.88□□□□□ -0.03
CLTA-203ENST00000396603 OR7A17O14581 309 aa14.88□□□□□ -0.03
CLTA-203ENST00000396603 SPAG7O75391 227 aa14.88□□□□□ -0.03
CLTA-203ENST00000396603 PPM1BO75688 479 aa14.88□□□□□ -0.03
CLTA-203ENST00000396603 ABCB1P08183 1280 aaPredicted RBP14.88□□□□□ -0.03
CLTA-203ENST00000396603 CT62P0C5K7 136 aa14.88□□□□□ -0.03
CLTA-203ENST00000396603 CPN1P15169 458 aa14.88□□□□□ -0.03
CLTA-203ENST00000396603 H2AFXP16104 143 aaPredicted RBP14.88□□□□□ -0.03
CLTA-203ENST00000396603 BMP7P18075 431 aa14.88□□□□□ -0.03
CLTA-203ENST00000396603 KLK2P20151 261 aa14.88□□□□□ -0.03
CLTA-203ENST00000396603 S1PR1P21453 382 aa14.88□□□□□ -0.03
CLTA-203ENST00000396603 GPX3P22352 226 aa14.88□□□□□ -0.03
CLTA-203ENST00000396603 PTPN6P29350 595 aa14.88□□□□□ -0.03
CLTA-203ENST00000396603 NEK2P51955 445 aa14.88□□□□□ -0.03
CLTA-203ENST00000396603 UNC50Q53HI1 259 aa14.88□□□□□ -0.03
CLTA-203ENST00000396603 SLC48A1Q6P1K1 146 aa14.88□□□□□ -0.03
CLTA-203ENST00000396603 GPRIN3Q6ZVF9 776 aa14.88□□□□□ -0.03
CLTA-203ENST00000396603 METTL4Q8N3J2 472 aa14.88□□□□□ -0.03
CLTA-203ENST00000396603 OR52B6Q8NGF0 335 aa14.88□□□□□ -0.03
CLTA-203ENST00000396603 OR1J4Q8NGS1 313 aa14.88□□□□□ -0.03
CLTA-203ENST00000396603 TCP10LQ8TDR4 215 aa14.88□□□□□ -0.03
CLTA-203ENST00000396603 ABTB1Q969K4 478 aaPredicted RBP14.88□□□□□ -0.03
CLTA-203ENST00000396603 WDYHV1Q96HA8 205 aa14.88□□□□□ -0.03
CLTA-203ENST00000396603 NSUN5Q96P11 429 aaKnown RBP14.88□□□□□ -0.03
CLTA-203ENST00000396603 GNRHR2Q96P88 292 aa14.88□□□□□ -0.03
CLTA-203ENST00000396603 FAM111AQ96PZ2 611 aa14.88□□□□□ -0.03
CLTA-203ENST00000396603 UGT2B28Q9BY64 529 aa14.88□□□□□ -0.03
CLTA-203ENST00000396603 ACBD3Q9H3P7 528 aa14.88□□□□□ -0.03
CLTA-203ENST00000396603 ELOVL6Q9H5J4 265 aa14.88□□□□□ -0.03
CLTA-203ENST00000396603 VIPAS39Q9H9C1 493 aa14.88□□□□□ -0.03
CLTA-203ENST00000396603 BRF2Q9HAW0 419 aa14.88□□□□□ -0.03
CLTA-203ENST00000396603 ZBTB26Q9HCK0 441 aa14.88□□□□□ -0.03
CLTA-203ENST00000396603 TRPS1Q9UHF7 1281 aa14.88□□□□□ -0.03
CLTA-203ENST00000396603 PSME2Q9UL46 239 aa14.88□□□□□ -0.03
CLTA-203ENST00000396603 SNPHO15079 494 aa14.87□□□□□ -0.03
CLTA-203ENST00000396603 TYROBPO43914 113 aa14.87□□□□□ -0.03
CLTA-203ENST00000396603 TRIM13O60858 407 aa14.87□□□□□ -0.03
CLTA-203ENST00000396603 KRT6AP02538 564 aa14.87□□□□□ -0.03
CLTA-203ENST00000396603 RAF1P04049 648 aa14.87□□□□□ -0.03
CLTA-203ENST00000396603 KRT6BP04259 564 aa14.87□□□□□ -0.03
CLTA-203ENST00000396603 ENO1P06733 434 aaKnown RBP14.87□□□□□ -0.03
CLTA-203ENST00000396603 NT5EP21589 574 aa14.87□□□□□ -0.03
CLTA-203ENST00000396603 TACR1P25103 407 aa14.87□□□□□ -0.03
CLTA-203ENST00000396603 KRT6CP48668 564 aa14.87□□□□□ -0.03
CLTA-203ENST00000396603 PCYT1AP49585 367 aa14.87□□□□□ -0.03
CLTA-203ENST00000396603 NAGLUP54802 743 aa14.87□□□□□ -0.03
CLTA-203ENST00000396603 CDH13P55290 713 aa14.87□□□□□ -0.03
CLTA-203ENST00000396603 TRA2BP62995 288 aaKnown RBP14.87□□□□□ -0.03
CLTA-203ENST00000396603 TRAF3Q13114 568 aa14.87□□□□□ -0.03
CLTA-203ENST00000396603 CEBPEQ15744 281 aa14.87□□□□□ -0.03
CLTA-203ENST00000396603 PRICKLE4Q2TBC4 344 aa14.87□□□□□ -0.03
CLTA-203ENST00000396603 TNFAIP8L3Q5GJ75 292 aa14.87□□□□□ -0.03
CLTA-203ENST00000396603 CCNYL2Q5T2Q4 361 aa14.87□□□□□ -0.03
CLTA-203ENST00000396603 EXOC3L1Q86VI1 746 aa14.87□□□□□ -0.03
CLTA-203ENST00000396603 OR4F6Q8NGB9 312 aa14.87□□□□□ -0.03
CLTA-203ENST00000396603 ERP27Q96DN0 273 aa14.87□□□□□ -0.03
CLTA-203ENST00000396603 SFXN3Q9BWM7 321 aa14.87□□□□□ -0.03
CLTA-203ENST00000396603 METTL7AQ9H8H3 244 aa14.87□□□□□ -0.03
CLTA-203ENST00000396603 NMRK1Q9NWW6 199 aa14.87□□□□□ -0.03
CLTA-203ENST00000396603 PRODH2Q9UF12 536 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms