RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 G3V3Y1 287 aa15.25■□□□□ 0.03
CXCL1-201ENST00000395761 NDUFAB1O14561 156 aa15.25■□□□□ 0.03
CXCL1-201ENST00000395761 PSMG1O95456 288 aa15.25■□□□□ 0.03
CXCL1-201ENST00000395761 C6orf47O95873 294 aa15.25■□□□□ 0.03
CXCL1-201ENST00000395761 CT45A8P0DMV1 189 aa15.25■□□□□ 0.03
CXCL1-201ENST00000395761 CT45A9P0DMV2 189 aa15.25■□□□□ 0.03
CXCL1-201ENST00000395761 CCL3P10147 92 aa15.25■□□□□ 0.03
CXCL1-201ENST00000395761 IDO1P14902 403 aa15.25■□□□□ 0.03
CXCL1-201ENST00000395761 IL12AP29459 219 aa15.25■□□□□ 0.03
CXCL1-201ENST00000395761 ATP4BP51164 291 aa15.25■□□□□ 0.03
CXCL1-201ENST00000395761 WNT3P56703 355 aa15.25■□□□□ 0.03
CXCL1-201ENST00000395761 GPR85P60893 370 aa15.25■□□□□ 0.03
CXCL1-201ENST00000395761 DCAF7P61962 342 aa15.25■□□□□ 0.03
CXCL1-201ENST00000395761 PHC1P78364 1004 aa15.25■□□□□ 0.03
CXCL1-201ENST00000395761 SF3A3Q12874 501 aaKnown RBP eCLIP15.25■□□□□ 0.03
CXCL1-201ENST00000395761 MLC1Q15049 377 aa15.25■□□□□ 0.03
CXCL1-201ENST00000395761 CT45A2Q5DJT8 189 aa15.25■□□□□ 0.03
CXCL1-201ENST00000395761 OR4F3Q6IEY1 312 aa15.25■□□□□ 0.03
CXCL1-201ENST00000395761 FAM180AQ6UWF9 173 aa15.25■□□□□ 0.03
CXCL1-201ENST00000395761 NPSR1Q6W5P4 371 aa15.25■□□□□ 0.03
CXCL1-201ENST00000395761 WDR53Q7Z5U6 358 aaPredicted RBP15.25■□□□□ 0.03
CXCL1-201ENST00000395761 CAMKMTQ7Z624 323 aa15.25■□□□□ 0.03
CXCL1-201ENST00000395761 CPSF7Q8N684 471 aaKnown RBP15.25■□□□□ 0.03
CXCL1-201ENST00000395761 OR10G3Q8NGC4 313 aa15.25■□□□□ 0.03
CXCL1-201ENST00000395761 OR5M3Q8NGP4 307 aa15.25■□□□□ 0.03
CXCL1-201ENST00000395761 SGCZQ96LD1 299 aa15.25■□□□□ 0.03
CXCL1-201ENST00000395761 BTBD9Q96Q07 612 aa15.25■□□□□ 0.03
CXCL1-201ENST00000395761 BHLHE41Q9C0J9 482 aaPredicted RBP15.25■□□□□ 0.03
CXCL1-201ENST00000395761 SH2D2AQ9NP31 389 aa15.25■□□□□ 0.03
CXCL1-201ENST00000395761 MRGBPQ9NV56 204 aa15.25■□□□□ 0.03
CXCL1-201ENST00000395761 TAS2R9Q9NYW1 312 aa15.25■□□□□ 0.03
CXCL1-201ENST00000395761 A0A0G2JMM0 328 aa15.24■□□□□ 0.03
CXCL1-201ENST00000395761 A0A1W2PPB8 328 aa15.24■□□□□ 0.03
CXCL1-201ENST00000395761 A0A1W2PRS3 328 aa15.24■□□□□ 0.03
CXCL1-201ENST00000395761 PINLYPA6NC86 204 aa15.24■□□□□ 0.03
CXCL1-201ENST00000395761 FRG2CA6NGY1 282 aa15.24■□□□□ 0.03
CXCL1-201ENST00000395761 KIR3DP1A8MWS1 328 aa15.24■□□□□ 0.03
CXCL1-201ENST00000395761 J3QKU1 62 aa15.24■□□□□ 0.03
CXCL1-201ENST00000395761 PEX1O43933 1283 aa15.24■□□□□ 0.03
CXCL1-201ENST00000395761 COQ9O75208 318 aa15.24■□□□□ 0.03
CXCL1-201ENST00000395761 ERN1O75460 977 aaKnown RBP15.24■□□□□ 0.03
CXCL1-201ENST00000395761 DDX5P17844 614 aaKnown RBP15.24■□□□□ 0.03
CXCL1-201ENST00000395761 ABCD3P28288 659 aa15.24■□□□□ 0.03
CXCL1-201ENST00000395761 FBXW4P57775 412 aa15.24■□□□□ 0.03
CXCL1-201ENST00000395761 ZNF155Q12901 538 aaPredicted RBP15.24■□□□□ 0.03
CXCL1-201ENST00000395761 INAQ16352 499 aa15.24■□□□□ 0.03
CXCL1-201ENST00000395761 RNFT1Q5M7Z0 435 aa15.24■□□□□ 0.03
CXCL1-201ENST00000395761 ZNF324BQ6AW86 544 aaPredicted RBP15.24■□□□□ 0.03
CXCL1-201ENST00000395761 DESI1Q6ICB0 168 aa15.24■□□□□ 0.03
CXCL1-201ENST00000395761 GOLM1Q8NBJ4 401 aa15.24■□□□□ 0.03
CXCL1-201ENST00000395761 FAM13CQ8NE31 585 aa15.24■□□□□ 0.03
CXCL1-201ENST00000395761 OR4N2Q8NGD1 307 aa15.24■□□□□ 0.03
CXCL1-201ENST00000395761 FAR1Q8WVX9 515 aa15.24■□□□□ 0.03
CXCL1-201ENST00000395761 OR5P2Q8WZ92 322 aa15.24■□□□□ 0.03
CXCL1-201ENST00000395761 HSPBAP1Q96EW2 488 aa15.24■□□□□ 0.03
CXCL1-201ENST00000395761 ZNF385DQ9H6B1 395 aa15.24■□□□□ 0.03
CXCL1-201ENST00000395761 CLMPQ9H6B4 373 aa15.24■□□□□ 0.03
CXCL1-201ENST00000395761 SDR39U1Q9NRG7 319 aaPredicted RBP15.24■□□□□ 0.03
CXCL1-201ENST00000395761 TMEM45AQ9NWC5 275 aa15.24■□□□□ 0.03
CXCL1-201ENST00000395761 NTMQ9P121 344 aa15.24■□□□□ 0.03
CXCL1-201ENST00000395761 MAPRE3Q9UPY8 281 aa15.24■□□□□ 0.03
CXCL1-201ENST00000395761 KLF13Q9Y2Y9 288 aaPredicted RBP15.24■□□□□ 0.03
CXCL1-201ENST00000395761 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.23■□□□□ 0.03
CXCL1-201ENST00000395761 ASPDHA6ND91 283 aa15.23■□□□□ 0.03
CXCL1-201ENST00000395761 TO15178 435 aa15.23■□□□□ 0.03
CXCL1-201ENST00000395761 ACOX3O15254 700 aa15.23■□□□□ 0.03
CXCL1-201ENST00000395761 CCDC22O60826 627 aa15.23■□□□□ 0.03
CXCL1-201ENST00000395761 SCN2BO60939 215 aa15.23■□□□□ 0.03
CXCL1-201ENST00000395761 ABCB1P08183 1280 aaPredicted RBP15.23■□□□□ 0.03
CXCL1-201ENST00000395761 IFI6P09912 130 aa15.23■□□□□ 0.03
CXCL1-201ENST00000395761 MST1P26927 711 aa15.23■□□□□ 0.03
CXCL1-201ENST00000395761 ADSLP30566 484 aaPredicted RBP15.23■□□□□ 0.03
CXCL1-201ENST00000395761 PIGAP37287 484 aa15.23■□□□□ 0.03
CXCL1-201ENST00000395761 RFC3P40938 356 aa15.23■□□□□ 0.03
CXCL1-201ENST00000395761 MEOX1P50221 254 aa15.23■□□□□ 0.03
CXCL1-201ENST00000395761 PRKAG1P54619 331 aa15.23■□□□□ 0.03
CXCL1-201ENST00000395761 NRG3P56975 720 aa15.23■□□□□ 0.03
CXCL1-201ENST00000395761 PSG6Q00889 435 aa15.23■□□□□ 0.03
CXCL1-201ENST00000395761 RPS6KA2Q15349 733 aa15.23■□□□□ 0.03
CXCL1-201ENST00000395761 NTRK2Q16620 822 aa15.23■□□□□ 0.03
CXCL1-201ENST00000395761 PDCD4Q53EL6 469 aaKnown RBP15.23■□□□□ 0.03
CXCL1-201ENST00000395761 SPANXN4Q5MJ08 99 aa15.23■□□□□ 0.03
CXCL1-201ENST00000395761 SLC22A10Q63ZE4 541 aa15.23■□□□□ 0.03
CXCL1-201ENST00000395761 SLC44A2Q8IWA5 706 aaPredicted RBP15.23■□□□□ 0.03
CXCL1-201ENST00000395761 CLECL1Q8IZS7 167 aa15.23■□□□□ 0.03
CXCL1-201ENST00000395761 NATD1Q8N6N6 113 aa15.23■□□□□ 0.03
CXCL1-201ENST00000395761 BCORP1Q8N888 145 aa15.23■□□□□ 0.03
CXCL1-201ENST00000395761 CCDC197Q8NCU1 140 aa15.23■□□□□ 0.03
CXCL1-201ENST00000395761 NUP43Q8NFH3 380 aa15.23■□□□□ 0.03
CXCL1-201ENST00000395761 OR8J2Q8NGG1 315 aa15.23■□□□□ 0.03
CXCL1-201ENST00000395761 PAQR8Q8TEZ7 354 aa15.23■□□□□ 0.03
CXCL1-201ENST00000395761 TESCQ96BS2 214 aa15.23■□□□□ 0.03
CXCL1-201ENST00000395761 FAM120BQ96EK7 910 aaKnown RBP15.23■□□□□ 0.03
CXCL1-201ENST00000395761 GIMAP5Q96F15 307 aa15.23■□□□□ 0.03
CXCL1-201ENST00000395761 C16orf58Q96GQ5 468 aa15.23■□□□□ 0.03
CXCL1-201ENST00000395761 FRMD6Q96NE9 622 aa15.23■□□□□ 0.03
CXCL1-201ENST00000395761 CXorf36Q9H7Y0 433 aa15.23■□□□□ 0.03
CXCL1-201ENST00000395761 EQTNQ9NQ60 294 aa15.23■□□□□ 0.03
CXCL1-201ENST00000395761 AGPAT4Q9NRZ5 378 aa15.23■□□□□ 0.03
CXCL1-201ENST00000395761 SACM1LQ9NTJ5 587 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms