RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 CPMP14384 443 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 CTF1Q16619 201 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 MFSD12Q6NUT3 480 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 C16orf62Q7Z3J2 963 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 DNAJC22Q8N4W6 341 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 RASSF5Q8WWW0 418 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 ARSGQ96EG1 525 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 DHRS1Q96LJ7 313 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 SIGLEC11Q96RL6 698 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 UCK2Q9BZX2 261 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 ADAP2Q9NPF8 381 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 FBXO34Q9NWN3 711 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 IMPAD1Q9NX62 359 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 PHF11Q9UIL8 331 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 ENTPD2Q9Y5L3 495 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 URADA6NGE7 173 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 SLC9B1P1A6NJY1 282 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 FAM170BA6NMN3 283 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 ZAR1LA6NP61 321 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 A8MVJ9 347 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 CYR61O00622 381 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 UGT2B17O75795 530 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 TNNI3P19429 210 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 TLX1P31314 330 aaPredicted RBP14.11□□□□□ -0.15
GPC3-202ENST00000394299 TRHRP34981 398 aaPredicted RBP14.11□□□□□ -0.15
GPC3-202ENST00000394299 AVPR1BP47901 424 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 EXOSC7Q15024 291 aaKnown RBP14.11□□□□□ -0.15
GPC3-202ENST00000394299 DUSP5Q16690 384 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 SYT16Q17RD7 645 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 DGAT2L6Q6ZPD8 337 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 RNF44Q7L0R7 432 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 PRSS48Q7RTY5 328 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 ZER1Q7Z7L7 766 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 IQCF1Q8N6M8 205 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 OR9A4Q8NGU2 314 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 RAB2BQ8WUD1 216 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 ZFPM2Q8WW38 1151 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 PSD2Q9BQI7 771 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 PRO3102Q9H379 93 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 CAPN10Q9HC96 672 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 VPS13AQ96RL7 3174 aa14.11□□□□□ -0.15
GPC3-202ENST00000394299 CPSF4LA6NMK7 179 aaKnown RBP14.1□□□□□ -0.15
GPC3-202ENST00000394299 H3BN98 237 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 RDH16O75452 317 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 CT62P0C5K7 136 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 MMP11P24347 488 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 SH3BGRP55822 239 aaPredicted RBP14.1□□□□□ -0.15
GPC3-202ENST00000394299 USP53Q70EK8 1073 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 IQCHQ86VS3 1027 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 OOSP2Q86WS3 158 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 LMX1AQ8TE12 382 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 RPL3LQ92901 407 aaKnown RBP14.1□□□□□ -0.15
GPC3-202ENST00000394299 MOAP1Q96BY2 351 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 CCDC3Q9BQI4 270 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 ALOXE3Q9BYJ1 711 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 GIN1Q9NXP7 522 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 TMEM9Q9P0T7 183 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 ENPP5Q9UJA9 477 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 SLC9A8Q9Y2E8 581 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 MUC3AQ02505 3323 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 DSPPQ9NZW4 1301 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 NPIPA5A0A0B4J1W7 369 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 OR5K4A6NMS3 321 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 CLCA1A8K7I4 914 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 NPIPA7E9PJI5 369 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 TOR1BO14657 336 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 GALR3O60755 368 aaPredicted RBP14.1□□□□□ -0.15
GPC3-202ENST00000394299 SDC3O75056 442 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 TP53P04637 393 aaPredicted RBP14.1□□□□□ -0.15
GPC3-202ENST00000394299 ALPPP05187 535 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 NPIPA8P0DM63 369 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 ACP2P11117 423 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 IL9P15248 144 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 PORP16435 677 aaPredicted RBP14.1□□□□□ -0.15
GPC3-202ENST00000394299 NT5EP21589 574 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 CDH3P22223 829 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 PPM1FP49593 454 aaPredicted RBP14.1□□□□□ -0.15
GPC3-202ENST00000394299 MLLT1Q03111 559 aaPredicted RBP14.1□□□□□ -0.15
GPC3-202ENST00000394299 FAM92BQ6ZTR7 304 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 PTCHD4Q6ZW05 846 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 C11orf74Q86VG3 221 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 CA13Q8N1Q1 262 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 ARL14Q8N4G2 192 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 OR4K5Q8NGD3 323 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 TBC1D15Q8TC07 691 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 PIK3R3Q92569 461 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 PHOX2BQ99453 314 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 POLR2J3Q9H1A7 115 aaKnown RBP14.1□□□□□ -0.15
GPC3-202ENST00000394299 TIMMDC1Q9NPL8 285 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 CLCA2Q9UQC9 943 aa14.1□□□□□ -0.15
GPC3-202ENST00000394299 CHURC1-FNTBB4DL54 471 aa14.09□□□□□ -0.15
GPC3-202ENST00000394299 FAAHO00519 579 aa14.09□□□□□ -0.15
GPC3-202ENST00000394299 ZSCAN9O15535 394 aaPredicted RBP14.09□□□□□ -0.15
GPC3-202ENST00000394299 OSMP13725 252 aa14.09□□□□□ -0.15
GPC3-202ENST00000394299 ANXA11P50995 505 aaKnown RBP14.09□□□□□ -0.15
GPC3-202ENST00000394299 VBP1P61758 197 aa14.09□□□□□ -0.15
GPC3-202ENST00000394299 ERV3-1Q14264 604 aa14.09□□□□□ -0.15
GPC3-202ENST00000394299 FAM214AQ32MH5 1076 aa14.09□□□□□ -0.15
GPC3-202ENST00000394299 SYT6Q5T7P8 510 aaPredicted RBP14.09□□□□□ -0.15
GPC3-202ENST00000394299 ARMC6Q6NXE6 501 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms