RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 SRD5A2P31213 254 aa13.92□□□□□ -0.18
CHMP3-202ENST00000393773 STARP49675 285 aa13.92□□□□□ -0.18
CHMP3-202ENST00000393773 DUSP2Q05923 314 aa13.92□□□□□ -0.18
CHMP3-202ENST00000393773 FAM27E3Q08E93 113 aa13.92□□□□□ -0.18
CHMP3-202ENST00000393773 MAP4K2Q12851 820 aa13.92□□□□□ -0.18
CHMP3-202ENST00000393773 PFKFB4Q16877 469 aa13.92□□□□□ -0.18
CHMP3-202ENST00000393773 SLC48A1Q6P1K1 146 aa13.92□□□□□ -0.18
CHMP3-202ENST00000393773 VWA1Q6PCB0 445 aa13.92□□□□□ -0.18
CHMP3-202ENST00000393773 CXXC5Q7LFL8 322 aaKnown RBP13.92□□□□□ -0.18
CHMP3-202ENST00000393773 GRAMD2AQ8IUY3 354 aa13.92□□□□□ -0.18
CHMP3-202ENST00000393773 PERPQ96FX8 193 aa13.92□□□□□ -0.18
CHMP3-202ENST00000393773 LCORQ96JN0 433 aaPredicted RBP13.92□□□□□ -0.18
CHMP3-202ENST00000393773 WFIKKN1Q96NZ8 548 aa13.92□□□□□ -0.18
CHMP3-202ENST00000393773 CDK15Q96Q40 435 aa13.92□□□□□ -0.18
CHMP3-202ENST00000393773 HS3ST6Q96QI5 342 aa13.92□□□□□ -0.18
CHMP3-202ENST00000393773 BDH2Q9BUT1 245 aa13.92□□□□□ -0.18
CHMP3-202ENST00000393773 MRPL1Q9BYD6 325 aaKnown RBP13.92□□□□□ -0.18
CHMP3-202ENST00000393773 BRINP2Q9C0B6 783 aa13.92□□□□□ -0.18
CHMP3-202ENST00000393773 IPPKQ9H8X2 491 aa13.92□□□□□ -0.18
CHMP3-202ENST00000393773 UBTD1Q9HAC8 227 aa13.92□□□□□ -0.18
CHMP3-202ENST00000393773 KLHL28Q9NXS3 571 aa13.92□□□□□ -0.18
CHMP3-202ENST00000393773 TAS2R10Q9NYW0 307 aa13.92□□□□□ -0.18
CHMP3-202ENST00000393773 GRHL1Q9NZI5 618 aa13.92□□□□□ -0.18
CHMP3-202ENST00000393773 FBXL2Q9UKC9 423 aa13.92□□□□□ -0.18
CHMP3-202ENST00000393773 ADAM29Q9UKF5 820 aa13.92□□□□□ -0.18
CHMP3-202ENST00000393773 ADAM21Q9UKJ8 722 aa13.92□□□□□ -0.18
CHMP3-202ENST00000393773 CES1P1Q9UKY3 287 aa13.92□□□□□ -0.18
CHMP3-202ENST00000393773 DLGAP4Q9Y2H0 992 aa13.92□□□□□ -0.18
CHMP3-202ENST00000393773 PLLPQ9Y342 182 aa13.92□□□□□ -0.18
CHMP3-202ENST00000393773 WIF1Q9Y5W5 379 aa13.92□□□□□ -0.18
CHMP3-202ENST00000393773 TO15178 435 aa13.91□□□□□ -0.18
CHMP3-202ENST00000393773 SIX3O95343 332 aaPredicted RBP13.91□□□□□ -0.18
CHMP3-202ENST00000393773 GSTA2P09210 222 aa13.91□□□□□ -0.18
CHMP3-202ENST00000393773 CD79BP40259 229 aa13.91□□□□□ -0.18
CHMP3-202ENST00000393773 MC3RP41968 323 aa13.91□□□□□ -0.18
CHMP3-202ENST00000393773 EEF1A1P68104 462 aaKnown RBP13.91□□□□□ -0.18
CHMP3-202ENST00000393773 MRPS25P82663 173 aaKnown RBP13.91□□□□□ -0.18
CHMP3-202ENST00000393773 HMGCS1Q01581 520 aa13.91□□□□□ -0.18
CHMP3-202ENST00000393773 ACKR1Q16570 336 aa13.91□□□□□ -0.18
CHMP3-202ENST00000393773 EEF1A1P5Q5VTE0 462 aa13.91□□□□□ -0.18
CHMP3-202ENST00000393773 SCIMPQ6UWF3 145 aa13.91□□□□□ -0.18
CHMP3-202ENST00000393773 C3orf62Q6ZUJ4 267 aa13.91□□□□□ -0.18
CHMP3-202ENST00000393773 PPM1NQ8N819 430 aa13.91□□□□□ -0.18
CHMP3-202ENST00000393773 OR52B6Q8NGF0 335 aa13.91□□□□□ -0.18
CHMP3-202ENST00000393773 RNF138Q8WVD3 245 aa13.91□□□□□ -0.18
CHMP3-202ENST00000393773 IGFBPL1Q8WX77 278 aa13.91□□□□□ -0.18
CHMP3-202ENST00000393773 STARD4Q96DR4 205 aa13.91□□□□□ -0.18
CHMP3-202ENST00000393773 PIK3IP1Q96FE7 263 aa13.91□□□□□ -0.18
CHMP3-202ENST00000393773 PIGQQ9BRB3 760 aa13.91□□□□□ -0.18
CHMP3-202ENST00000393773 DPH5Q9H2P9 285 aa13.91□□□□□ -0.18
CHMP3-202ENST00000393773 WHRNQ9P202 907 aa13.91□□□□□ -0.18
CHMP3-202ENST00000393773 HEY2Q9UBP5 337 aa13.91□□□□□ -0.18
CHMP3-202ENST00000393773 BCAP29Q9UHQ4 241 aa13.91□□□□□ -0.18
CHMP3-202ENST00000393773 CFL2Q9Y281 166 aa13.91□□□□□ -0.18
CHMP3-202ENST00000393773 PCDHA9Q9Y5H5 950 aa13.91□□□□□ -0.18
CHMP3-202ENST00000393773 CCDC189A1A4V9 331 aa13.9□□□□□ -0.18
CHMP3-202ENST00000393773 FRG2CA6NGY1 282 aa13.9□□□□□ -0.18
CHMP3-202ENST00000393773 OR6C70A6NIJ9 312 aa13.9□□□□□ -0.18
CHMP3-202ENST00000393773 ZSCAN12O43309 604 aa13.9□□□□□ -0.18
CHMP3-202ENST00000393773 CRHP06850 196 aa13.9□□□□□ -0.18
CHMP3-202ENST00000393773 KLK1P06870 262 aa13.9□□□□□ -0.18
CHMP3-202ENST00000393773 FPR1P21462 350 aa13.9□□□□□ -0.18
CHMP3-202ENST00000393773 EMDP50402 254 aa13.9□□□□□ -0.18
CHMP3-202ENST00000393773 LTB4RQ15722 352 aa13.9□□□□□ -0.18
CHMP3-202ENST00000393773 AAGABQ6PD74 315 aa13.9□□□□□ -0.18
CHMP3-202ENST00000393773 ZNF474Q6S9Z5 364 aaPredicted RBP13.9□□□□□ -0.18
CHMP3-202ENST00000393773 C20orf204Q6ZNR8 217 aa13.9□□□□□ -0.18
CHMP3-202ENST00000393773 PLCZ1Q86YW0 608 aa13.9□□□□□ -0.18
CHMP3-202ENST00000393773 OR52R1Q8NGF1 315 aa13.9□□□□□ -0.18
CHMP3-202ENST00000393773 SLC35A4Q96G79 324 aa13.9□□□□□ -0.18
CHMP3-202ENST00000393773 SFXN2Q96NB2 322 aa13.9□□□□□ -0.18
CHMP3-202ENST00000393773 GPR78Q96P69 363 aa13.9□□□□□ -0.18
CHMP3-202ENST00000393773 GSX2Q9BZM3 304 aa13.9□□□□□ -0.18
CHMP3-202ENST00000393773 ZNF226Q9NYT6 803 aa13.9□□□□□ -0.18
CHMP3-202ENST00000393773 TRPS1Q9UHF7 1281 aa13.9□□□□□ -0.18
CHMP3-202ENST00000393773 ACOT9Q9Y305 439 aa13.9□□□□□ -0.18
CHMP3-202ENST00000393773 USF3Q68DE3 2245 aa13.9□□□□□ -0.18
CHMP3-202ENST00000393773 A0A087X1B8 175 aa13.89□□□□□ -0.19
CHMP3-202ENST00000393773 HMX2A2RU54 273 aa13.89□□□□□ -0.19
CHMP3-202ENST00000393773 GOLGA6L10A6NI86 522 aa13.89□□□□□ -0.19
CHMP3-202ENST00000393773 C17orf51A8MQB3 221 aa13.89□□□□□ -0.19
CHMP3-202ENST00000393773 SMNDC1O75940 238 aaKnown RBP eCLIP13.89□□□□□ -0.19
CHMP3-202ENST00000393773 CLDN9O95484 217 aa13.89□□□□□ -0.19
CHMP3-202ENST00000393773 C2P06681 752 aa13.89□□□□□ -0.19
CHMP3-202ENST00000393773 PCSK2P16519 638 aa13.89□□□□□ -0.19
CHMP3-202ENST00000393773 DRD5P21918 477 aa13.89□□□□□ -0.19
CHMP3-202ENST00000393773 UGT2B10P36537 528 aa13.89□□□□□ -0.19
CHMP3-202ENST00000393773 FEN1P39748 380 aaKnown RBP13.89□□□□□ -0.19
CHMP3-202ENST00000393773 MAPK12P53778 367 aa13.89□□□□□ -0.19
CHMP3-202ENST00000393773 GAS1P54826 345 aa13.89□□□□□ -0.19
CHMP3-202ENST00000393773 B3GALT5-AS1P59052 145 aa13.89□□□□□ -0.19
CHMP3-202ENST00000393773 MRPS35P82673 323 aaKnown RBP13.89□□□□□ -0.19
CHMP3-202ENST00000393773 TRAF3Q13114 568 aa13.89□□□□□ -0.19
CHMP3-202ENST00000393773 CALCOCO2Q13137 446 aa13.89□□□□□ -0.19
CHMP3-202ENST00000393773 NAB1Q13506 487 aa13.89□□□□□ -0.19
CHMP3-202ENST00000393773 TRMT12Q53H54 448 aaKnown RBP13.89□□□□□ -0.19
CHMP3-202ENST00000393773 CCNYL2Q5T2Q4 361 aa13.89□□□□□ -0.19
CHMP3-202ENST00000393773 FRG2Q64ET8 278 aa13.89□□□□□ -0.19
CHMP3-202ENST00000393773 METTL2BQ6P1Q9 378 aaKnown RBP13.89□□□□□ -0.19
CHMP3-202ENST00000393773 COMMD6Q7Z4G1 85 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms