RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 SLC35F4A4IF30 521 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 SLC30A4O14863 429 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 HAT1O14929 419 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 GMFGO60234 142 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 ENTPD6O75354 484 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 FCER2P06734 321 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 TYRP1P17643 537 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 CXCR4P61073 352 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 GRSF1Q12849 480 aaKnown RBP eCLIP9.96□□□□□ -0.81
CALD1-203ENST00000393118 MAP4K2Q12851 820 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 XAF1Q6GPH4 301 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 ARSKQ6UWY0 536 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 VN1R5Q7Z5H4 357 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 BCDIN3DQ7Z5W3 292 aaKnown RBP9.96□□□□□ -0.81
CALD1-203ENST00000393118 NRARPQ7Z6K4 114 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 LHFPL3Q86UP9 236 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 LYSMD2Q8IV50 215 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 LSMEM1Q8N8F7 131 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 UXS1Q8NBZ7 420 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 C7orf57Q8NEG2 295 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 DENND6BQ8NEG7 585 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 PJA1Q8NG27 643 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 TMEM80Q96HE8 168 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 FYTTD1Q96QD9 318 aaKnown RBP9.96□□□□□ -0.81
CALD1-203ENST00000393118 TREX2Q9BQ50 279 aaPredicted RBP9.96□□□□□ -0.81
CALD1-203ENST00000393118 MBNL1Q9NR56 388 aaKnown RBP9.96□□□□□ -0.81
CALD1-203ENST00000393118 SOHLH2Q9NX45 425 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 TAAR2Q9P1P5 351 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 ZNF639Q9UID6 485 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 WDR45Q9Y484 360 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 PCDHGA6Q9Y5G7 932 aa9.96□□□□□ -0.81
CALD1-203ENST00000393118 B3GALT2O43825 422 aa9.96□□□□□ -0.82
CALD1-203ENST00000393118 PTHP01270 115 aa9.96□□□□□ -0.82
CALD1-203ENST00000393118 JUNBP17275 347 aaPredicted RBP9.96□□□□□ -0.82
CALD1-203ENST00000393118 CHMP24386 653 aa9.96□□□□□ -0.82
CALD1-203ENST00000393118 EVI2BP34910 448 aa9.96□□□□□ -0.82
CALD1-203ENST00000393118 LIPAP38571 399 aa9.96□□□□□ -0.82
CALD1-203ENST00000393118 MC3RP41968 323 aa9.96□□□□□ -0.82
CALD1-203ENST00000393118 SMSP52788 366 aa9.96□□□□□ -0.82
CALD1-203ENST00000393118 TAS2R38P59533 333 aa9.96□□□□□ -0.82
CALD1-203ENST00000393118 ZNF45Q02386 682 aa9.96□□□□□ -0.82
CALD1-203ENST00000393118 LGALS3BPQ08380 585 aa9.96□□□□□ -0.82
CALD1-203ENST00000393118 COX10Q12887 443 aa9.96□□□□□ -0.82
CALD1-203ENST00000393118 ZNF155Q12901 538 aaPredicted RBP9.96□□□□□ -0.82
CALD1-203ENST00000393118 RPA4Q13156 261 aa9.96□□□□□ -0.82
CALD1-203ENST00000393118 SPHARQ15513 63 aa9.96□□□□□ -0.82
CALD1-203ENST00000393118 PRRT3Q5FWE3 981 aa9.96□□□□□ -0.82
CALD1-203ENST00000393118 CDC73Q6P1J9 531 aa9.96□□□□□ -0.82
CALD1-203ENST00000393118 ZNF761Q86XN6 746 aaPredicted RBP9.96□□□□□ -0.82
CALD1-203ENST00000393118 ZNF655Q8N720 491 aaPredicted RBP9.96□□□□□ -0.82
CALD1-203ENST00000393118 OR52E1Q8NGJ3 308 aa9.96□□□□□ -0.82
CALD1-203ENST00000393118 OR5K2Q8NHB8 316 aa9.96□□□□□ -0.82
CALD1-203ENST00000393118 ST8SIA2Q92186 375 aa9.96□□□□□ -0.82
CALD1-203ENST00000393118 HRASLS5Q96KN8 279 aa9.96□□□□□ -0.82
CALD1-203ENST00000393118 CDADC1Q9BWV3 514 aa9.96□□□□□ -0.82
CALD1-203ENST00000393118 RACGAP1Q9H0H5 632 aa9.96□□□□□ -0.82
CALD1-203ENST00000393118 CNIH4Q9P003 139 aa9.96□□□□□ -0.82
CALD1-203ENST00000393118 C17orf113A0A1B0GUU1 675 aa9.96□□□□□ -0.82
CALD1-203ENST00000393118 FAAHO00519 579 aa9.96□□□□□ -0.82
CALD1-203ENST00000393118 PRKAR1AP10644 381 aa9.96□□□□□ -0.82
CALD1-203ENST00000393118 RPL4P36578 427 aaKnown RBP9.96□□□□□ -0.82
CALD1-203ENST00000393118 TALDO1P37837 337 aa9.96□□□□□ -0.82
CALD1-203ENST00000393118 RAE1P78406 368 aaKnown RBP9.96□□□□□ -0.82
CALD1-203ENST00000393118 CTBSQ01459 385 aa9.96□□□□□ -0.82
CALD1-203ENST00000393118 DNAJC22Q8N4W6 341 aa9.96□□□□□ -0.82
CALD1-203ENST00000393118 ACOT4Q8N9L9 421 aa9.96□□□□□ -0.82
CALD1-203ENST00000393118 GRHL3Q8TE85 626 aa9.96□□□□□ -0.82
CALD1-203ENST00000393118 MCHR1Q99705 422 aa9.96□□□□□ -0.82
CALD1-203ENST00000393118 MED28Q9H204 178 aa9.96□□□□□ -0.82
CALD1-203ENST00000393118 SEC16AO15027 2179 aa9.96□□□□□ -0.82
CALD1-203ENST00000393118 TRPM6Q9BX84 2022 aa9.95□□□□□ -0.82
CALD1-203ENST00000393118 FABP12A6NFH5 140 aa9.95□□□□□ -0.82
CALD1-203ENST00000393118 POLR1CO15160 346 aaPredicted RBP9.95□□□□□ -0.82
CALD1-203ENST00000393118 SSNA1O43805 119 aa9.95□□□□□ -0.82
CALD1-203ENST00000393118 KLF8O95600 359 aaPredicted RBP9.95□□□□□ -0.82
CALD1-203ENST00000393118 ADH1BP00325 375 aa9.95□□□□□ -0.82
CALD1-203ENST00000393118 CDK1P06493 297 aa9.95□□□□□ -0.82
CALD1-203ENST00000393118 IGFBP1P08833 259 aaPredicted RBP9.95□□□□□ -0.82
CALD1-203ENST00000393118 PRG2P13727 222 aa9.95□□□□□ -0.82
CALD1-203ENST00000393118 TAGLNQ01995 201 aaKnown RBP9.95□□□□□ -0.82
CALD1-203ENST00000393118 POU4F3Q15319 338 aa9.95□□□□□ -0.82
CALD1-203ENST00000393118 AKIRIN2Q53H80 203 aa9.95□□□□□ -0.82
CALD1-203ENST00000393118 RNASE12Q5GAN4 147 aaKnown RBP9.95□□□□□ -0.82
CALD1-203ENST00000393118 MLIPQ5VWP3 458 aa9.95□□□□□ -0.82
CALD1-203ENST00000393118 PLPP6Q8IY26 295 aa9.95□□□□□ -0.82
CALD1-203ENST00000393118 ZNF784Q8NCA9 323 aaPredicted RBP9.95□□□□□ -0.82
CALD1-203ENST00000393118 OR9A2Q8NGT5 310 aa9.95□□□□□ -0.82
CALD1-203ENST00000393118 COQ8BQ96D53 544 aa9.95□□□□□ -0.82
CALD1-203ENST00000393118 COQ10AQ96MF6 247 aa9.95□□□□□ -0.82
CALD1-203ENST00000393118 PSD2Q9BQI7 771 aa9.95□□□□□ -0.82
CALD1-203ENST00000393118 RNF167Q9H6Y7 350 aa9.95□□□□□ -0.82
CALD1-203ENST00000393118 SAGE1Q9NXZ1 904 aa9.95□□□□□ -0.82
CALD1-203ENST00000393118 NDRG4Q9ULP0 352 aaKnown RBP9.95□□□□□ -0.82
CALD1-203ENST00000393118 PADI2Q9Y2J8 665 aa9.95□□□□□ -0.82
CALD1-203ENST00000393118 TSC2P49815 1807 aa9.95□□□□□ -0.82
CALD1-203ENST00000393118 RFXAPO00287 272 aa9.95□□□□□ -0.82
CALD1-203ENST00000393118 OSMP13725 252 aa9.95□□□□□ -0.82
CALD1-203ENST00000393118 GPR4P46093 362 aa9.95□□□□□ -0.82
CALD1-203ENST00000393118 STX4Q12846 297 aa9.95□□□□□ -0.82
CALD1-203ENST00000393118 ZNHIT3Q15649 155 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms