RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 ENDOUP21128 410 aaKnown RBP13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 NNMTP40261 264 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 GPR1P46091 355 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 VSX2P58304 361 aaPredicted RBP13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 POLR2LP62875 67 aaKnown RBP13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 MLLT11Q13015 90 aaPredicted RBP13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 TEAD2Q15562 447 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 PIP5KL1Q5T9C9 394 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 MSANTD1Q6ZTZ1 278 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 ANKK1Q8NFD2 765 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 SPRYD4Q8WW59 207 aaPredicted RBP13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 SLC5A11Q8WWX8 675 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 POP5Q969H6 163 aaKnown RBP13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 GLYATL1Q969I3 302 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 C16orf58Q96GQ5 468 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 TEFMQ96QE5 360 aaKnown RBP13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 ZNF607Q96SK3 696 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 ACOXLQ9NUZ1 547 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 NDUFB11Q9NX14 153 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 BACE2Q9Y5Z0 518 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 POM121CA8CG34 1229 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 HNRNPCL2B2RXH8 293 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 POLR2EP19388 210 aaKnown RBP13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 CST5P28325 142 aaPredicted RBP13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 PPP2R1BP30154 601 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 OR10A3P58181 314 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 ABATP80404 500 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 CCDC149Q6ZUS6 474 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 GDPD1Q8N9F7 314 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 OR51L1Q8NGJ5 315 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 OVCA2Q8WZ82 227 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 REV1Q9UBZ9 1251 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 MGAT4BQ9UQ53 548 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 PCYT1BQ9Y5K3 369 aaPredicted RBP13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 AGAP14A8MT82 685 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 GNB5O14775 395 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 GRM6O15303 877 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 HOXA2O43364 376 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 PAICSP22234 425 aaKnown RBP13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 PTX3P26022 381 aaPredicted RBP13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 SSR2P43308 183 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 CHRNEQ04844 493 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 CAMK1Q14012 370 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 TOR1AIP1Q5JTV8 583 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 BTN2A2Q8WVV5 523 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 ORAI1Q96D31 301 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 ECHDC3Q96DC8 303 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 ELAC1Q9H777 363 aaKnown RBP13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 DDX31Q9H8H2 851 aaKnown RBP13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 RBFOX1Q9NWB1 397 aaKnown RBP13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 NCKAP1Q9Y2A7 1128 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 SCN5AQ14524 2016 aa13.72□□□□□ -0.21
LRRFIP1-204ENST00000392000 SOCS6O14544 535 aa13.71□□□□□ -0.21
LRRFIP1-204ENST00000392000 AKAP8O43823 692 aaKnown RBP13.71□□□□□ -0.21
LRRFIP1-204ENST00000392000 GYPBP06028 91 aa13.71□□□□□ -0.21
LRRFIP1-204ENST00000392000 CCR6P51684 374 aa13.71□□□□□ -0.21
LRRFIP1-204ENST00000392000 NCBP2P52298 156 aaKnown RBP eCLIP13.71□□□□□ -0.21
LRRFIP1-204ENST00000392000 ASAH1Q13510 395 aa13.71□□□□□ -0.21
LRRFIP1-204ENST00000392000 GLYR1Q49A26 553 aaPredicted RBP13.71□□□□□ -0.21
LRRFIP1-204ENST00000392000 C9orf64Q5T6V5 341 aa13.71□□□□□ -0.21
LRRFIP1-204ENST00000392000 SFTPA1Q8IWL2 248 aa13.71□□□□□ -0.21
LRRFIP1-204ENST00000392000 OR4M1Q8NGD0 313 aa13.71□□□□□ -0.21
LRRFIP1-204ENST00000392000 SATB2Q9UPW6 733 aa13.71□□□□□ -0.21
LRRFIP1-204ENST00000392000 SMAD9O15198 467 aaKnown RBP13.71□□□□□ -0.21
LRRFIP1-204ENST00000392000 POP7O75817 140 aaKnown RBP13.71□□□□□ -0.21
LRRFIP1-204ENST00000392000 GATBO75879 557 aaKnown RBP13.71□□□□□ -0.21
LRRFIP1-204ENST00000392000 MPC1LP0DKB6 136 aa13.71□□□□□ -0.21
LRRFIP1-204ENST00000392000 ELK1P19419 428 aa13.71□□□□□ -0.21
LRRFIP1-204ENST00000392000 SHC1P29353 583 aa13.71□□□□□ -0.21
LRRFIP1-204ENST00000392000 TAP2Q03519 686 aa13.71□□□□□ -0.21
LRRFIP1-204ENST00000392000 ILKQ13418 452 aa13.71□□□□□ -0.21
LRRFIP1-204ENST00000392000 SFRP4Q6FHJ7 346 aaPredicted RBP13.71□□□□□ -0.21
LRRFIP1-204ENST00000392000 BHLHB9Q6PI77 547 aa13.71□□□□□ -0.21
LRRFIP1-204ENST00000392000 RPTNQ6XPR3 784 aa13.71□□□□□ -0.21
LRRFIP1-204ENST00000392000 CYB561A3Q8NBI2 242 aa13.71□□□□□ -0.21
LRRFIP1-204ENST00000392000 GANCQ8TET4 914 aa13.71□□□□□ -0.21
LRRFIP1-204ENST00000392000 RNF170Q96K19 258 aa13.71□□□□□ -0.21
LRRFIP1-204ENST00000392000 RIPOR3Q96MK2 946 aa13.71□□□□□ -0.21
LRRFIP1-204ENST00000392000 TMEM175Q9BSA9 504 aa13.71□□□□□ -0.21
LRRFIP1-204ENST00000392000 ISG20L2Q9H9L3 353 aaKnown RBP13.71□□□□□ -0.21
LRRFIP1-204ENST00000392000 URB1O60287 2271 aaKnown RBP13.71□□□□□ -0.21
LRRFIP1-204ENST00000392000 RECKO95980 971 aa13.71□□□□□ -0.22
LRRFIP1-204ENST00000392000 SLC6A11P48066 632 aa13.71□□□□□ -0.22
LRRFIP1-204ENST00000392000 CEP76Q8TAP6 659 aa13.71□□□□□ -0.22
LRRFIP1-204ENST00000392000 SLC28A3Q9HAS3 691 aa13.71□□□□□ -0.22
LRRFIP1-204ENST00000392000 THSD1Q9NS62 852 aa13.71□□□□□ -0.22
LRRFIP1-204ENST00000392000 TP53BP1Q12888 1972 aaPredicted RBP13.7□□□□□ -0.22
LRRFIP1-204ENST00000392000 GABRPO00591 440 aa13.7□□□□□ -0.22
LRRFIP1-204ENST00000392000 SLCO2B1O94956 709 aa13.7□□□□□ -0.22
LRRFIP1-204ENST00000392000 KELP23276 732 aa13.7□□□□□ -0.22
LRRFIP1-204ENST00000392000 VIPR1P32241 457 aa13.7□□□□□ -0.22
LRRFIP1-204ENST00000392000 WASP42768 502 aa13.7□□□□□ -0.22
LRRFIP1-204ENST00000392000 RRAS2P62070 204 aaPredicted RBP13.7□□□□□ -0.22
LRRFIP1-204ENST00000392000 KRT33BQ14525 404 aa13.7□□□□□ -0.22
LRRFIP1-204ENST00000392000 PRAMEF14Q5SWL7 426 aa13.7□□□□□ -0.22
LRRFIP1-204ENST00000392000 PRAMEF13Q5VWM6 474 aa13.7□□□□□ -0.22
LRRFIP1-204ENST00000392000 TPGS2Q68CL5 300 aa13.7□□□□□ -0.22
LRRFIP1-204ENST00000392000 VRK2Q86Y07 508 aa13.7□□□□□ -0.22
LRRFIP1-204ENST00000392000 PGBD3Q8N328 593 aa13.7□□□□□ -0.22
LRRFIP1-204ENST00000392000 ZFAND1Q8TCF1 268 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms