RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 IKQ13123 557 aaPredicted RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 RIPK1Q13546 671 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 CUL4BQ13620 913 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 MORC3Q14149 939 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 FAM53BQ14153 422 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 GALEQ14376 348 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 HLTFQ14527 1009 aaKnown RBP eCLIP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 SMC1AQ14683 1233 aaKnown RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 OPCMLQ14982 345 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 HEPACAMQ14CZ8 416 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 POLD3Q15054 466 aaPredicted RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 PSG5Q15238 335 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 KRT31Q15323 416 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 RPS6KA2Q15349 733 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 SLC9A3R2Q15599 337 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 ZIC1Q15915 447 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 DUSP5Q16690 384 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 MEP1AQ16819 746 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 ZNF791Q3KP31 576 aaPredicted RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 ANKRD55Q3KP44 614 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 TKFCQ3LXA3 575 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 GALNTL6Q49A17 601 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 MCMDC2Q4G0Z9 681 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 LRRC24Q50LG9 513 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 ARHGAP29Q52LW3 1261 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 TAF7LQ5H9L4 462 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 CXorf66Q5JRM2 361 aaPredicted RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 CASC10Q5T4H9 136 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 ATPAF1Q5TC12 328 aaPredicted RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 AP1ARQ63HQ0 302 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 TXNDC8Q6A555 127 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 C6orf89Q6UWU4 347 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 CXCL17Q6UXB2 119 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 MACC1Q6ZN28 852 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 ZBTB49Q6ZSB9 765 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 Q6ZVQ6 151 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 Q71RC1 249 aaPredicted RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 ZNF767PQ75MW2 155 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 ENOSF1Q7L5Y1 443 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 RAB11FIP2Q7L804 512 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 HSD11B1LQ7Z5J1 315 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 STRA8Q7Z7C7 330 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 SDCCAG8Q86SQ7 713 aaPredicted RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 PRPF39Q86UA1 669 aaKnown RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 MOGAT3Q86VF5 341 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 UNC5CLQ8IV45 518 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 MISPQ8IVT2 679 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 RIMKLAQ8IXN7 391 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 MMD2Q8IY49 270 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 MCOLN2Q8IZK6 566 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 FAM177A1Q8N128 213 aaPredicted RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 NDUFAF2Q8N183 169 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 EXOC3-AS1Q8N2X6 119 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 SFRP1Q8N474 314 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 AFAP1L2Q8N4X5 818 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 CNTD1Q8N815 330 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 LRTM2Q8N967 370 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 TC2NQ8N9U0 490 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 SLC43A3Q8NBI5 491 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 CLEC1AQ8NC01 280 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 ZNF740Q8NDX6 193 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 C19orf18Q8NEA5 215 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 B3GNT7Q8NFL0 401 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 OR11H6Q8NGC7 330 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 OR4C15Q8NGM1 316 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 OR10G4Q8NGN3 311 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 OR13G1Q8NGZ3 307 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 OR14L1PQ8NHC6 308 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 PPP1R35Q8TAP8 253 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 GSDMBQ8TAX9 411 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 ACTL9Q8TC94 416 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 ZFP90Q8TF47 636 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 AFG1LQ8WV93 481 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 FAM151AQ8WW52 585 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 SELENOMQ8WWX9 145 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 PATE1Q8WXA2 126 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 ZNF606Q8WXB4 792 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 PHYHIPQ92561 330 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 ATP6V0A1Q93050 837 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 HSPBAP1Q96EW2 488 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 MASTLQ96GX5 879 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 NARS2Q96I59 477 aaKnown RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 CELF6Q96J87 481 aaKnown RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 IFT74Q96LB3 600 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 FAM81BQ96LP2 452 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 C12orf42Q96LP6 360 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 C9orf85Q96MD7 179 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 NEDD4LQ96PU5 975 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 BTBD9Q96Q07 612 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 OR2A5Q96R48 311 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 CYP2S1Q96SQ9 504 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 PCDHB18PQ96TA0 734 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 TBCBQ99426 244 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 GMLQ99445 158 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 CDCA3Q99618 268 aaPredicted RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 TXN2Q99757 166 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 ARHGDIGQ99819 225 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 MRPL57Q9BQC6 102 aaKnown RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 SEC22CQ9BRL7 303 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 BTBD10Q9BSF8 475 aa-0.5□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms