RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 MNX1P50219 401 aaPredicted RBP13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 BLVRAP53004 296 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 RAG2P55895 527 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 YBEYP58557 167 aaPredicted RBP13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 KIAA1024LP59773 190 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 RAB8AP61006 207 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 TLE2Q04725 743 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 EEF1A2Q05639 463 aaKnown RBP13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 INSL4Q14641 139 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 LTB4RQ15722 352 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 TCTE1Q5JU00 501 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 SLC25A30Q5SVS4 291 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 GCNT6Q5T4J0 391 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 CPTPQ5TA50 214 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 LYPD4Q6UWN0 246 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 SEZ6L2Q6UXD5 910 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 ANGPTL8Q6UXH0 198 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 HSD17B13Q7Z5P4 300 aaPredicted RBP13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 NPAS3Q8IXF0 933 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 HJURPQ8NCD3 748 aaPredicted RBP13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 CHFRQ96EP1 664 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 DDOQ99489 341 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 FGF20Q9NP95 211 aaPredicted RBP13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 MAFFQ9ULX9 164 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 MGAT4BQ9UQ53 548 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 FAM74A7A6NL05 159 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 POM121CA8CG34 1229 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 SCAMP2O15127 329 aaKnown RBP13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 SIGLEC6O43699 453 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 VNN2O95498 520 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 HPXP02790 462 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 H2AFB2P0C5Z0 115 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 UGT2B7P16662 529 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 RECQLP46063 649 aaPredicted RBP13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 PITPNBP48739 271 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 CACNG1Q06432 222 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 MAP4K2Q12851 820 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 ZXDCQ2QGD7 858 aaPredicted RBP13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 FAM74A3Q4VXF1 159 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 XKR6Q5GH73 641 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 CRB2Q5IJ48 1285 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 FRG2Q64ET8 278 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 LRRC28Q86X40 367 aaPredicted RBP13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 ZNF485Q8NCK3 441 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 PATJQ8NI35 1801 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 COQ8AQ8NI60 647 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 FUBP3Q96I24 572 aaKnown RBP eCLIP13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 HIST1H2AHQ96KK5 128 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 LRR1Q96L50 414 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 FRG2BQ96QU4 278 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 ABHD1Q96SE0 405 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 PKP4Q99569 1192 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 TMED9Q9BVK6 235 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 BOCQ9BWV1 1114 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 POLDIP3Q9BY77 421 aaKnown RBP13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 POLR2J3Q9H1A7 115 aaKnown RBP13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 OSGEPL1Q9H4B0 414 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 PLXNA4Q9HCM2 1894 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 COPZ2Q9P299 210 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 A0A1B0GVC2 190 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 C2orf92A0A1B0GVN3 265 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 A6NIN4 97 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 DRGXA6NNA5 263 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 MPTX1A8MV57 137 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 TEX46H3BTG2 121 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 GABRPO00591 440 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 YKT6O15498 198 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 PRAMEF4O60810 478 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 IFNA14P01570 189 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 IFNW1P05000 195 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 RPLP2P05387 115 aaKnown RBP13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 EIF4EP06730 217 aaKnown RBP13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 BTF3P20290 206 aaKnown RBP13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 LIM2P55344 173 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 DHODHQ02127 395 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 SF1Q15637 639 aaKnown RBP13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 PRAMEF9Q5VWM5 478 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 CORO6Q6QEF8 472 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 NR2C2APQ86WQ0 139 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 CLDN19Q8N6F1 224 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 L3MBTL4Q8NA19 623 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 C11orf49Q9H6J7 331 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 TBC1D17Q9HA65 648 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 SEMA3GQ9NS98 782 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 MRPS18AQ9NVS2 196 aaKnown RBP13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 MARCH5Q9NX47 278 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 NLGN3Q9NZ94 848 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 PRSS21Q9Y6M0 314 aa13.84□□□□□ -0.19
VPS9D1-201ENST00000389386 PRRC2BQ5JSZ5 2229 aaKnown RBP13.83□□□□□ -0.19
VPS9D1-201ENST00000389386 PLSCR5A0PG75 271 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 SERTM1A2A2V5 107 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 MTMR11A4FU01 709 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 ANKRD66B4E2M5 251 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 INSIG1O15503 277 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 APOC1P02654 83 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 APOC3P02656 99 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 HLA-DPB1P04440 258 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 LIMS3P0CW19 117 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 LIMS4P0CW20 117 aa13.83□□□□□ -0.2
VPS9D1-201ENST00000389386 CCR6P51684 374 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms