RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 PATE1Q8WXA2 126 aa21.66■■□□□ 1.06
VPS16-201ENST00000380443 KAT2AQ92830 837 aa21.66■■□□□ 1.06
VPS16-201ENST00000380443 ITPAQ9BY32 194 aa21.66■■□□□ 1.06
VPS16-201ENST00000380443 M0R3H8 397 aa21.66■■□□□ 1.06
VPS16-201ENST00000380443 NME6O75414 186 aaPredicted RBP21.66■■□□□ 1.06
VPS16-201ENST00000380443 PIPP12273 146 aaPredicted RBP21.66■■□□□ 1.06
VPS16-201ENST00000380443 HHEXQ03014 270 aa21.66■■□□□ 1.06
VPS16-201ENST00000380443 PIN1Q13526 163 aaPredicted RBP21.66■■□□□ 1.06
VPS16-201ENST00000380443 STX19Q8N4C7 294 aa21.66■■□□□ 1.06
VPS16-201ENST00000380443 CSNK1A1LQ8N752 337 aa21.66■■□□□ 1.06
VPS16-201ENST00000380443 OR7G2Q8NG99 324 aa21.66■■□□□ 1.06
VPS16-201ENST00000380443 OR6T1Q8NGN1 323 aa21.66■■□□□ 1.06
VPS16-201ENST00000380443 ZDHHC1Q8WTX9 485 aa21.66■■□□□ 1.06
VPS16-201ENST00000380443 PMM1Q92871 262 aa21.66■■□□□ 1.06
VPS16-201ENST00000380443 SLC35A4Q96G79 324 aa21.66■■□□□ 1.06
VPS16-201ENST00000380443 UCK1Q9HA47 277 aa21.66■■□□□ 1.06
VPS16-201ENST00000380443 POMT2Q9UKY4 750 aa21.66■■□□□ 1.06
VPS16-201ENST00000380443 C19orf53Q9UNZ5 99 aaPredicted RBP21.66■■□□□ 1.06
VPS16-201ENST00000380443 A0A1W2PS29 197 aa21.65■■□□□ 1.06
VPS16-201ENST00000380443 TLR4O00206 839 aa21.65■■□□□ 1.06
VPS16-201ENST00000380443 CLPXO76031 633 aa21.65■■□□□ 1.06
VPS16-201ENST00000380443 EPPINO95925 133 aa21.65■■□□□ 1.06
VPS16-201ENST00000380443 ATP1B1P05026 303 aa21.65■■□□□ 1.06
VPS16-201ENST00000380443 CNR2P34972 360 aa21.65■■□□□ 1.06
VPS16-201ENST00000380443 LSSP48449 732 aa21.65■■□□□ 1.06
VPS16-201ENST00000380443 LTB4RQ15722 352 aa21.65■■□□□ 1.06
VPS16-201ENST00000380443 ZNF829Q3KNS6 432 aaPredicted RBP21.65■■□□□ 1.06
VPS16-201ENST00000380443 ARHGAP11BQ3KRB8 267 aa21.65■■□□□ 1.06
VPS16-201ENST00000380443 TMEM201Q5SNT2 666 aa21.65■■□□□ 1.06
VPS16-201ENST00000380443 C12orf73Q69YU5 71 aa21.65■■□□□ 1.06
VPS16-201ENST00000380443 C1orf94Q6P1W5 598 aa21.65■■□□□ 1.06
VPS16-201ENST00000380443 PODNL1Q6PEZ8 512 aa21.65■■□□□ 1.06
VPS16-201ENST00000380443 TOR1AIP2Q8NFQ8 470 aa21.65■■□□□ 1.06
VPS16-201ENST00000380443 SLC38A4Q969I6 547 aa21.65■■□□□ 1.06
VPS16-201ENST00000380443 ORAI3Q9BRQ5 295 aa21.65■■□□□ 1.06
VPS16-201ENST00000380443 IL21RQ9HBE5 538 aa21.65■■□□□ 1.06
VPS16-201ENST00000380443 EVA1BQ9NVM1 165 aa21.65■■□□□ 1.06
VPS16-201ENST00000380443 ZNF232Q9UNY5 417 aa21.65■■□□□ 1.06
VPS16-201ENST00000380443 MRPS17Q9Y2R5 130 aaKnown RBP21.65■■□□□ 1.06
VPS16-201ENST00000380443 KCNE3Q9Y6H6 103 aa21.65■■□□□ 1.06
VPS16-201ENST00000380443 ARHGEF17Q96PE2 2063 aaPredicted RBP21.64■■□□□ 1.06
VPS16-201ENST00000380443 GALR3O60755 368 aaPredicted RBP21.64■■□□□ 1.06
VPS16-201ENST00000380443 GPR75O95800 540 aa21.64■■□□□ 1.06
VPS16-201ENST00000380443 GSSP48637 474 aa21.64■■□□□ 1.06
VPS16-201ENST00000380443 OLR1P78380 273 aa21.64■■□□□ 1.06
VPS16-201ENST00000380443 CHRNEQ04844 493 aa21.64■■□□□ 1.06
VPS16-201ENST00000380443 TARDBPQ13148 414 aaKnown RBP eCLIP21.64■■□□□ 1.06
VPS16-201ENST00000380443 ZNF628Q5EBL2 1059 aa21.64■■□□□ 1.06
VPS16-201ENST00000380443 NIPAL1Q6NVV3 410 aa21.64■■□□□ 1.06
VPS16-201ENST00000380443 ZNF687Q8N1G0 1237 aa21.64■■□□□ 1.06
VPS16-201ENST00000380443 LMAN1LQ9HAT1 526 aa21.64■■□□□ 1.06
VPS16-201ENST00000380443 EQTNQ9NQ60 294 aa21.64■■□□□ 1.06
VPS16-201ENST00000380443 DLL1O00548 723 aa21.64■■□□□ 1.05
VPS16-201ENST00000380443 PLOD3O60568 738 aa21.64■■□□□ 1.05
VPS16-201ENST00000380443 FUT4P22083 530 aa21.64■■□□□ 1.05
VPS16-201ENST00000380443 TRAM2Q15035 370 aa21.64■■□□□ 1.05
VPS16-201ENST00000380443 INAVAQ3KP66 663 aa21.64■■□□□ 1.05
VPS16-201ENST00000380443 ENTPD8Q5MY95 495 aa21.64■■□□□ 1.05
VPS16-201ENST00000380443 C6orf132Q5T0Z8 1188 aa21.64■■□□□ 1.05
VPS16-201ENST00000380443 MEDAGQ5VYS4 303 aa21.64■■□□□ 1.05
VPS16-201ENST00000380443 CASP12Q6UXS9 341 aa21.64■■□□□ 1.05
VPS16-201ENST00000380443 IQCHQ86VS3 1027 aa21.64■■□□□ 1.05
VPS16-201ENST00000380443 ZNF675Q8TD23 568 aa21.64■■□□□ 1.05
VPS16-201ENST00000380443 BORCS5Q969J3 196 aa21.64■■□□□ 1.05
VPS16-201ENST00000380443 CCDC3Q9BQI4 270 aa21.64■■□□□ 1.05
VPS16-201ENST00000380443 RHNO1Q9BSD3 238 aa21.64■■□□□ 1.05
VPS16-201ENST00000380443 CDCA4Q9BXL8 241 aa21.64■■□□□ 1.05
VPS16-201ENST00000380443 PIGUQ9H490 435 aa21.64■■□□□ 1.05
VPS16-201ENST00000380443 HEMK1Q9Y5R4 338 aaPredicted RBP21.64■■□□□ 1.05
VPS16-201ENST00000380443 AK1P00568 194 aa21.63■■□□□ 1.05
VPS16-201ENST00000380443 EIF2S1P05198 315 aaKnown RBP21.63■■□□□ 1.05
VPS16-201ENST00000380443 PTGER1P34995 402 aa21.63■■□□□ 1.05
VPS16-201ENST00000380443 STT3AP46977 705 aa21.63■■□□□ 1.05
VPS16-201ENST00000380443 SKP1P63208 163 aa21.63■■□□□ 1.05
VPS16-201ENST00000380443 SIM1P81133 766 aaPredicted RBP21.63■■□□□ 1.05
VPS16-201ENST00000380443 AQP6Q13520 282 aa21.63■■□□□ 1.05
VPS16-201ENST00000380443 IRF3Q14653 427 aa21.63■■□□□ 1.05
VPS16-201ENST00000380443 EXOSC6Q5RKV6 272 aaKnown RBP21.63■■□□□ 1.05
VPS16-201ENST00000380443 COMTD1Q86VU5 262 aa21.63■■□□□ 1.05
VPS16-201ENST00000380443 MORN4Q8NDC4 146 aa21.63■■□□□ 1.05
VPS16-201ENST00000380443 OR4K5Q8NGD3 323 aa21.63■■□□□ 1.05
VPS16-201ENST00000380443 OR8J1Q8NGP2 316 aa21.63■■□□□ 1.05
VPS16-201ENST00000380443 OR52P1PQ8NH57 321 aa21.63■■□□□ 1.05
VPS16-201ENST00000380443 COL26A1Q96A83 441 aa21.63■■□□□ 1.05
VPS16-201ENST00000380443 OTUB1Q96FW1 271 aaPredicted RBP21.63■■□□□ 1.05
VPS16-201ENST00000380443 WFDC6Q9BQY6 131 aa21.63■■□□□ 1.05
VPS16-201ENST00000380443 POLR2J2Q9GZM3 115 aaKnown RBP21.63■■□□□ 1.05
VPS16-201ENST00000380443 EVA1AQ9H8M9 152 aa21.63■■□□□ 1.05
VPS16-201ENST00000380443 MAN2C1Q9NTJ4 1040 aa21.63■■□□□ 1.05
VPS16-201ENST00000380443 SATB2Q9UPW6 733 aa21.63■■□□□ 1.05
VPS16-201ENST00000380443 IGHV1OR15-9A0A0B4J2B8 117 aa21.62■■□□□ 1.05
VPS16-201ENST00000380443 BLACEA4D250 179 aa21.62■■□□□ 1.05
VPS16-201ENST00000380443 CYR61O00622 381 aa21.62■■□□□ 1.05
VPS16-201ENST00000380443 CD27P26842 260 aa21.62■■□□□ 1.05
VPS16-201ENST00000380443 POU1F1P28069 291 aa21.62■■□□□ 1.05
VPS16-201ENST00000380443 EMP3P54852 163 aa21.62■■□□□ 1.05
VPS16-201ENST00000380443 TAS2R41P59536 307 aa21.62■■□□□ 1.05
VPS16-201ENST00000380443 ST3GAL3Q11203 375 aa21.62■■□□□ 1.05
VPS16-201ENST00000380443 ST3GAL4Q11206 333 aa21.62■■□□□ 1.05
VPS16-201ENST00000380443 BNIP3Q12983 259 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 203.1 ms