RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 DRD2P14416 443 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 TMEM11P17152 192 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 ADCYAP1P18509 176 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 NFKB1P19838 968 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 ITGA3P26006 1051 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 PTPN3P26045 913 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 PDZK1IP1Q13113 114 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 CCDC157Q569K6 752 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 THEM4Q5T1C6 240 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 GCNT6Q5T4J0 391 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 ZC3H14Q6PJT7 736 aaKnown RBP7.08□□□□□ -1.28
CDKL5-201ENST00000379989 ZNF730Q6ZMV8 503 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 FAM131BQ86XD5 332 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 NAXDQ8IW45 347 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 DCUN1D3Q8IWE4 304 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 LRR1Q96L50 414 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 TMEM209Q96SK2 561 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 JAM3Q9BX67 310 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 ABCG5Q9H222 651 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 SYNDIG1Q9H7V2 258 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 KLHL1Q9NR64 748 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 KLHL8Q9P2G9 620 aaPredicted RBP7.08□□□□□ -1.28
CDKL5-201ENST00000379989 FKBPLQ9UIM3 349 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 FBXL21Q9UKT6 434 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 SLC9A8Q9Y2E8 581 aa7.08□□□□□ -1.28
CDKL5-201ENST00000379989 LSM2Q9Y333 95 aaKnown RBP7.08□□□□□ -1.28
CDKL5-201ENST00000379989 A0A1W2PQ45 241 aaPredicted RBP7.07□□□□□ -1.28
CDKL5-201ENST00000379989 A0A1W2PQY0 241 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 LRRC14BA6NHZ5 514 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 DRGXA6NNA5 263 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 CACNB4O00305 520 aaPredicted RBP7.07□□□□□ -1.28
CDKL5-201ENST00000379989 SCAMP2O15127 329 aaKnown RBP7.07□□□□□ -1.28
CDKL5-201ENST00000379989 TPST2O60704 377 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 RP2O75695 350 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 IGLV3-27P01718 113 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 TFPIP10646 304 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 FOLR2P14207 255 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 ZNF44P15621 663 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 VIPR1P32241 457 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 BDKRB1P46663 353 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 HTR5AP47898 357 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 IDH2P48735 452 aaKnown RBP7.07□□□□□ -1.28
CDKL5-201ENST00000379989 PWP1Q13610 501 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 MELKQ14680 651 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 GSG1Q2KHT4 349 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 INO80DQ53TQ3 878 aaPredicted RBP7.07□□□□□ -1.28
CDKL5-201ENST00000379989 RAET1GQ6H3X3 334 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 C22orf42Q6IC83 251 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 SPATA19Q7Z5L4 167 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 TMEM17Q86X19 198 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 SKA3Q8IX90 412 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 ZNF567Q8N184 647 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 PXT1Q8NFP0 134 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 OR10J5Q8NHC4 309 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 THAP6Q8TBB0 222 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 WNT2BQ93097 391 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 CAPNS2Q96L46 248 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 ZIC5Q96T25 663 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 EDEM2Q9BV94 578 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 TKTL2Q9H0I9 626 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 HDHD2Q9H0R4 259 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 OPN3Q9H1Y3 402 aaPredicted RBP7.07□□□□□ -1.28
CDKL5-201ENST00000379989 SEMA6CQ9H3T2 930 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 KCNK12Q9HB15 430 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 NDUFB11Q9NX14 153 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 TAS2R3Q9NYW6 316 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 NLGN3Q9NZ94 848 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 PPP4R1LQ9P1A2 415 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 CA5BQ9Y2D0 317 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 DLGAP4Q9Y2H0 992 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 MED16Q9Y2X0 877 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 CXorf65A6NEN9 183 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 ARNTLO00327 626 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 ZNF197O14709 1029 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 OIP5O43482 229 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 SSNA1O43805 119 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 SUSD5O60279 629 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 SERPINA3P01011 423 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 IFNGP01579 166 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 TCRBP04435 133 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 G6PDP11413 515 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 IL1RNP18510 177 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 TBX4P57082 545 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 POU4F2Q12837 409 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 MAP4K2Q12851 820 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 NTRK2Q16620 822 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 MPPE1Q53F39 396 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 TMEM255AQ5JRV8 349 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 LHX8Q68G74 356 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 PID1Q7Z2X4 250 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 ANKRD33Q7Z3H0 272 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 ANKRD46Q86W74 232 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 SPAG16Q8N0X2 631 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 ZNF383Q8NA42 475 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 RELL2Q8NC24 303 aaPredicted RBP7.07□□□□□ -1.28
CDKL5-201ENST00000379989 TMEM163Q8TC26 289 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 GATAD2BQ8WXI9 593 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 SLAMF9Q96A28 289 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 PLD4Q96BZ4 506 aa7.07□□□□□ -1.28
CDKL5-201ENST00000379989 THUMPD3Q9BV44 507 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms