RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 ZNF226Q9NYT6 803 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 CNOT2Q9NZN8 540 aaKnown RBP9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 KCMF1Q9P0J7 381 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 WNT16Q9UBV4 365 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 NDOR1Q9UHB4 597 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 SLC13A4Q9UKG4 626 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 A4GNTQ9UNA3 340 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 SLC22A7Q9Y694 548 aa9.84□□□□□ -0.83
POLR2J3-201ENST00000379340 F5P12259 2224 aa9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 A0A1W2PPC4 97 aa9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 SH3PXD2BA1X283 911 aa9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 EFCAB10A6NFE3 127 aa9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 CLDN24A6NM45 220 aa9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 P2RX6O15547 441 aa9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 OR10H3O60404 316 aa9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 CTSVO60911 334 aa9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 ZNF217O75362 1048 aa9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 BCAS1O75363 584 aaPredicted RBP9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 FADS2O95864 444 aaKnown RBP9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 THEGLP0DJG4 465 aa9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 PIPP12273 146 aaPredicted RBP9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 CTSEP14091 401 aa9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 GSTM3P21266 225 aa9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 CHMP24386 653 aa9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 PRKAR1BP31321 381 aa9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 XKP51811 444 aa9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 SNRPGP62308 76 aaKnown RBP9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 MOGQ16653 247 aa9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 FAM214AQ32MH5 1076 aa9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 SLX4IPQ5VYV7 408 aa9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 HEPHL1Q6MZM0 1159 aa9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 CCDC81Q6ZN84 652 aa9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 C16orf62Q7Z3J2 963 aa9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 TAF8Q7Z7C8 310 aa9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 P2RY8Q86VZ1 359 aa9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 ZCCHC10Q8TBK6 192 aa9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 TBC1D15Q8TC07 691 aa9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 ADAMTS15Q8TE58 950 aa9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 GIMAP5Q96F15 307 aa9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 CRELD1Q96HD1 420 aa9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 Q96MT0 163 aa9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 ARHGDIGQ99819 225 aa9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 ITPAQ9BY32 194 aa9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 KLHL28Q9NXS3 571 aa9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 RHCGQ9UBD6 479 aa9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 CYP8B1Q9UNU6 501 aa9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 IFT52Q9Y366 437 aa9.83□□□□□ -0.84
POLR2J3-201ENST00000379340 A0A087WV62 115 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 OR5K3A6NET4 321 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 WASHC1A8K0Z3 465 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 H0YGG7 62 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 TLR4O00206 839 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 SOX30O94993 753 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 PORP16435 677 aaPredicted RBP9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 PSMB9P28065 219 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 IFNGR2P38484 337 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 MAP2K4P45985 399 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 ARF3P61204 181 aaPredicted RBP9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 RUNX2Q13950 521 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 FZD2Q14332 565 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 CTF1Q16619 201 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 ZNF750Q32MQ0 723 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 DEFB134Q4QY38 66 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 ZNF311Q5JNZ3 666 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 TMEM201Q5SNT2 666 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 AP1ARQ63HQ0 302 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 MFSD12Q6NUT3 480 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 NIPAL1Q6NVV3 410 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 ARMC6Q6NXE6 501 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 PGBD2Q6P3X8 592 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 ZCCHC12Q6PEW1 402 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 Q6ZPB1 254 aaPredicted RBP9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 PARGQ86W56 976 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 C1orf210Q8IVY1 113 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 CCDC103Q8IW40 242 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 OR2L13Q8N349 312 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 STX19Q8N4C7 294 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 OR4D11Q8NGI4 311 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 SLC37A2Q8TED4 501 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 GGHQ92820 318 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 PMM1Q92871 262 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 BORCS5Q969J3 196 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 KLHDC7BQ96G42 594 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 FCRL4Q96PJ5 515 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 CSF3RQ99062 836 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 YIPF4Q9BSR8 244 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 POLR2J3Q9H1A7 115 aaKnown RBP9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 SLC38A1Q9H2H9 487 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 PALMDQ9NP74 551 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 HRASLS2Q9NWW9 162 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 REV1Q9UBZ9 1251 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 AASSQ9UDR5 926 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 NDRG2Q9UN36 371 aaKnown RBP9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 ZFYVE26Q68DK2 2539 aa9.82□□□□□ -0.84
POLR2J3-201ENST00000379340 M0R3H8 397 aa9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 SEMA7AO75326 666 aa9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 NME6O75414 186 aaPredicted RBP9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 CLPXO76031 633 aa9.81□□□□□ -0.84
POLR2J3-201ENST00000379340 ALPPL2P10696 532 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms