RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 PLLPQ9Y342 182 aa16.11■□□□□ 0.17
PDLIM4-202ENST00000379018 USF3Q68DE3 2245 aa16.1■□□□□ 0.17
PDLIM4-202ENST00000379018 COL6A5A8TX70 2615 aa16.1■□□□□ 0.17
PDLIM4-202ENST00000379018 SYCE1LA8MT33 242 aa16.1■□□□□ 0.17
PDLIM4-202ENST00000379018 REM1O75628 298 aa16.1■□□□□ 0.17
PDLIM4-202ENST00000379018 CNOT4O95628 575 aaKnown RBP16.1■□□□□ 0.17
PDLIM4-202ENST00000379018 MTHFD2P13995 350 aa16.1■□□□□ 0.17
PDLIM4-202ENST00000379018 POU2F1P14859 743 aa16.1■□□□□ 0.17
PDLIM4-202ENST00000379018 TCP1P17987 556 aaKnown RBP16.1■□□□□ 0.17
PDLIM4-202ENST00000379018 S1PR1P21453 382 aa16.1■□□□□ 0.17
PDLIM4-202ENST00000379018 CHMP24386 653 aa16.1■□□□□ 0.17
PDLIM4-202ENST00000379018 CD79BP40259 229 aa16.1■□□□□ 0.17
PDLIM4-202ENST00000379018 MC3RP41968 323 aa16.1■□□□□ 0.17
PDLIM4-202ENST00000379018 GFRA1P56159 465 aa16.1■□□□□ 0.17
PDLIM4-202ENST00000379018 CLDN18P56856 261 aa16.1■□□□□ 0.17
PDLIM4-202ENST00000379018 SGO1Q5FBB7 561 aa16.1■□□□□ 0.17
PDLIM4-202ENST00000379018 CCNYL2Q5T2Q4 361 aa16.1■□□□□ 0.17
PDLIM4-202ENST00000379018 ANKRD34AQ69YU3 496 aa16.1■□□□□ 0.17
PDLIM4-202ENST00000379018 PRSS57Q6UWY2 283 aa16.1■□□□□ 0.17
PDLIM4-202ENST00000379018 PLCZ1Q86YW0 608 aa16.1■□□□□ 0.17
PDLIM4-202ENST00000379018 OR52R1Q8NGF1 315 aa16.1■□□□□ 0.17
PDLIM4-202ENST00000379018 PPP1R14CQ8TAE6 165 aa16.1■□□□□ 0.17
PDLIM4-202ENST00000379018 WDR20Q8TBZ3 569 aa16.1■□□□□ 0.17
PDLIM4-202ENST00000379018 ANP32BQ92688 251 aaKnown RBP16.1■□□□□ 0.17
PDLIM4-202ENST00000379018 TMBIM1Q969X1 311 aa16.1■□□□□ 0.17
PDLIM4-202ENST00000379018 ATP6V1E2Q96A05 226 aa16.1■□□□□ 0.17
PDLIM4-202ENST00000379018 SERPINI1Q99574 410 aa16.1■□□□□ 0.17
PDLIM4-202ENST00000379018 MRPL1Q9BYD6 325 aaKnown RBP16.1■□□□□ 0.17
PDLIM4-202ENST00000379018 HEY2Q9UBP5 337 aa16.1■□□□□ 0.17
PDLIM4-202ENST00000379018 CFL2Q9Y281 166 aa16.1■□□□□ 0.17
PDLIM4-202ENST00000379018 TSC22D4Q9Y3Q8 395 aa16.1■□□□□ 0.17
PDLIM4-202ENST00000379018 SLC22A20A6NK97 555 aa16.09■□□□□ 0.17
PDLIM4-202ENST00000379018 FAM159BA6NKW6 160 aa16.09■□□□□ 0.17
PDLIM4-202ENST00000379018 NME6O75414 186 aaPredicted RBP16.09■□□□□ 0.17
PDLIM4-202ENST00000379018 SIX3O95343 332 aaPredicted RBP16.09■□□□□ 0.17
PDLIM4-202ENST00000379018 ZNF708P17019 499 aa16.09■□□□□ 0.17
PDLIM4-202ENST00000379018 NAGAP17050 411 aa16.09■□□□□ 0.17
PDLIM4-202ENST00000379018 CRYGSP22914 178 aa16.09■□□□□ 0.17
PDLIM4-202ENST00000379018 SRD5A2P31213 254 aa16.09■□□□□ 0.17
PDLIM4-202ENST00000379018 CCKARP32238 428 aa16.09■□□□□ 0.17
PDLIM4-202ENST00000379018 PTH2RP49190 550 aa16.09■□□□□ 0.17
PDLIM4-202ENST00000379018 NR1H2P55055 460 aa16.09■□□□□ 0.17
PDLIM4-202ENST00000379018 GPX6P59796 221 aa16.09■□□□□ 0.17
PDLIM4-202ENST00000379018 LTB4RQ15722 352 aa16.09■□□□□ 0.17
PDLIM4-202ENST00000379018 PRICKLE4Q2TBC4 344 aa16.09■□□□□ 0.17
PDLIM4-202ENST00000379018 GRTP1Q5TC63 336 aa16.09■□□□□ 0.17
PDLIM4-202ENST00000379018 TTC19Q6DKK2 380 aaPredicted RBP16.09■□□□□ 0.17
PDLIM4-202ENST00000379018 ZNF474Q6S9Z5 364 aaPredicted RBP16.09■□□□□ 0.17
PDLIM4-202ENST00000379018 C20orf204Q6ZNR8 217 aa16.09■□□□□ 0.17
PDLIM4-202ENST00000379018 C3orf62Q6ZUJ4 267 aa16.09■□□□□ 0.17
PDLIM4-202ENST00000379018 BTLAQ7Z6A9 289 aa16.09■□□□□ 0.17
PDLIM4-202ENST00000379018 SPATA3Q8NHX4 192 aa16.09■□□□□ 0.17
PDLIM4-202ENST00000379018 CTHRC1Q96CG8 243 aa16.09■□□□□ 0.17
PDLIM4-202ENST00000379018 STARD4Q96DR4 205 aa16.09■□□□□ 0.17
PDLIM4-202ENST00000379018 MRRFQ96E11 262 aaKnown RBP16.09■□□□□ 0.17
PDLIM4-202ENST00000379018 UCN2Q96RP3 112 aa16.09■□□□□ 0.17
PDLIM4-202ENST00000379018 PFDN4Q9NQP4 134 aa16.09■□□□□ 0.17
PDLIM4-202ENST00000379018 MAT2BQ9NZL9 334 aa16.09■□□□□ 0.17
PDLIM4-202ENST00000379018 SONP18583 2426 aaKnown RBP16.08■□□□□ 0.17
PDLIM4-202ENST00000379018 CHD3Q12873 2000 aaKnown RBP16.08■□□□□ 0.16
PDLIM4-202ENST00000379018 FBN1P35555 2871 aaKnown RBP16.08■□□□□ 0.16
PDLIM4-202ENST00000379018 GOLGA6L10A6NI86 522 aa16.08■□□□□ 0.16
PDLIM4-202ENST00000379018 C17orf51A8MQB3 221 aa16.08■□□□□ 0.16
PDLIM4-202ENST00000379018 CRABP2P29373 138 aa16.08■□□□□ 0.16
PDLIM4-202ENST00000379018 UGT2B10P36537 528 aa16.08■□□□□ 0.16
PDLIM4-202ENST00000379018 ALDH9A1P49189 494 aa16.08■□□□□ 0.16
PDLIM4-202ENST00000379018 MAPK12P53778 367 aa16.08■□□□□ 0.16
PDLIM4-202ENST00000379018 EEF1A1P68104 462 aaKnown RBP16.08■□□□□ 0.16
PDLIM4-202ENST00000379018 MRPS35P82673 323 aaKnown RBP16.08■□□□□ 0.16
PDLIM4-202ENST00000379018 HMGCS1Q01581 520 aa16.08■□□□□ 0.16
PDLIM4-202ENST00000379018 DUSP2Q05923 314 aa16.08■□□□□ 0.16
PDLIM4-202ENST00000379018 SNTA1Q13424 505 aa16.08■□□□□ 0.16
PDLIM4-202ENST00000379018 TRMT12Q53H54 448 aaKnown RBP16.08■□□□□ 0.16
PDLIM4-202ENST00000379018 EEF1A1P5Q5VTE0 462 aa16.08■□□□□ 0.16
PDLIM4-202ENST00000379018 TMEM81Q6P7N7 255 aa16.08■□□□□ 0.16
PDLIM4-202ENST00000379018 KLHL29Q96CT2 875 aa16.08■□□□□ 0.16
PDLIM4-202ENST00000379018 TMCO6Q96DC7 493 aa16.08■□□□□ 0.16
PDLIM4-202ENST00000379018 ZNF845Q96IR2 970 aaPredicted RBP16.08■□□□□ 0.16
PDLIM4-202ENST00000379018 COL21A1Q96P44 957 aa16.08■□□□□ 0.16
PDLIM4-202ENST00000379018 KLHL4Q9C0H6 718 aa16.08■□□□□ 0.16
PDLIM4-202ENST00000379018 NOL11Q9H8H0 719 aaKnown RBP16.08■□□□□ 0.16
PDLIM4-202ENST00000379018 DLGAP4Q9Y2H0 992 aa16.08■□□□□ 0.16
PDLIM4-202ENST00000379018 ACOT9Q9Y305 439 aa16.08■□□□□ 0.16
PDLIM4-202ENST00000379018 ATRQ13535 2644 aa16.08■□□□□ 0.16
PDLIM4-202ENST00000379018 UQCRHLA0A096LP55 91 aa16.07■□□□□ 0.16
PDLIM4-202ENST00000379018 FOXE1O00358 373 aaPredicted RBP16.07■□□□□ 0.16
PDLIM4-202ENST00000379018 ACOX3O15254 700 aa16.07■□□□□ 0.16
PDLIM4-202ENST00000379018 SEC14L5O43304 696 aa16.07■□□□□ 0.16
PDLIM4-202ENST00000379018 UGDHO60701 494 aa16.07■□□□□ 0.16
PDLIM4-202ENST00000379018 SEMA3DO95025 777 aa16.07■□□□□ 0.16
PDLIM4-202ENST00000379018 CLDN9O95484 217 aa16.07■□□□□ 0.16
PDLIM4-202ENST00000379018 CBX7O95931 251 aa16.07■□□□□ 0.16
PDLIM4-202ENST00000379018 PCSK2P16519 638 aa16.07■□□□□ 0.16
PDLIM4-202ENST00000379018 DPP4P27487 766 aa16.07■□□□□ 0.16
PDLIM4-202ENST00000379018 CCNG1P51959 295 aa16.07■□□□□ 0.16
PDLIM4-202ENST00000379018 ALDH18A1P54886 795 aaKnown RBP16.07■□□□□ 0.16
PDLIM4-202ENST00000379018 MGAT2Q10469 447 aa16.07■□□□□ 0.16
PDLIM4-202ENST00000379018 CALCOCO2Q13137 446 aa16.07■□□□□ 0.16
PDLIM4-202ENST00000379018 EXOC3L2Q2M3D2 409 aa16.07■□□□□ 0.16
PDLIM4-202ENST00000379018 PPP4R4Q6NUP7 873 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms