RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 CCNJQ5T5M9 372 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 TSTD2Q5T7W7 516 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 HES5Q5TA89 166 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 MBLAC2Q68D91 279 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 CRELD2Q6UXH1 353 aaPredicted RBP12.68□□□□□ -0.38
HIPK3-202ENST00000379016 FAM171A2A8MVW0 826 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 F3P13726 295 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 PKLRP30613 574 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 TAS2R30P59541 319 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 GK2Q14410 553 aaPredicted RBP12.68□□□□□ -0.38
HIPK3-202ENST00000379016 TMEM130Q8N3G9 435 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 JOSD2Q8TAC2 188 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 NUPL2O15504 423 aaKnown RBP12.68□□□□□ -0.38
HIPK3-202ENST00000379016 PFKMP08237 780 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 KDELR2P33947 212 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 BAXQ07812 192 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 C1orf61Q13536 156 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 MEP1AQ16819 746 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 TUSC1Q2TAM9 212 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 VARS2Q5ST30 1063 aaKnown RBP12.68□□□□□ -0.38
HIPK3-202ENST00000379016 FCRLBQ6BAA4 426 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 TICAM1Q8IUC6 712 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 LINC00471Q8N535 108 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 HCAR1Q9BXC0 346 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 ACSS3Q9H6R3 686 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 CWH43Q9H720 699 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 APMAPQ9HDC9 416 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 PLSCR3Q9NRY6 295 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 EFCAB7A8K855 629 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 USP50Q70EL3 339 aaPredicted RBP12.68□□□□□ -0.38
HIPK3-202ENST00000379016 TSPAN33Q86UF1 283 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 TFGQ92734 400 aaPredicted RBP12.68□□□□□ -0.38
HIPK3-202ENST00000379016 ART4Q93070 314 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 ARSGQ96EG1 525 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 GSTO2Q9H4Y5 243 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 ACOXLQ9NUZ1 547 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 PRODH2Q9UF12 536 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 TSPAN11A1L157 253 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 PMM2O15305 246 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 HNF1AP20823 631 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 DEFA6Q01524 100 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 SNTB2Q13425 540 aaKnown RBP12.68□□□□□ -0.38
HIPK3-202ENST00000379016 CLINT1Q14677 625 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 ZNF542PQ5EBM4 170 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 SPARTQ8N0X7 666 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 MAL2Q969L2 176 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 PSD2Q9BQI7 771 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 NMES1Q9C002 83 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 TXNL4BQ9NX01 149 aaKnown RBP12.68□□□□□ -0.38
HIPK3-202ENST00000379016 ARPC5O15511 151 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 TMEM63AO94886 807 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 MPIG6BO95866 241 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 UCHL1P09936 223 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 PCGF3Q3KNV8 242 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 FIGNQ5HY92 759 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 ZNF776Q68DI1 518 aaPredicted RBP12.68□□□□□ -0.38
HIPK3-202ENST00000379016 ZNF514Q96K75 400 aaPredicted RBP12.68□□□□□ -0.38
HIPK3-202ENST00000379016 SPIN2AQ99865 258 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 SPIN2BQ9BPZ2 258 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 SLC25A51Q9H1U9 297 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 MAGEH1Q9H213 219 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 PADI3Q9ULW8 664 aa12.68□□□□□ -0.38
HIPK3-202ENST00000379016 GPR4P46093 362 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 XCR1P46094 333 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 ELOCQ15369 112 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 ATP6AP1Q15904 470 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 FRG2Q64ET8 278 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 TMEM107Q6UX40 140 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 Q6ZVU0 165 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 SLC16A10Q8TF71 515 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 ZNF641Q96N77 438 aaPredicted RBP12.67□□□□□ -0.38
HIPK3-202ENST00000379016 FRG2BQ96QU4 278 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 HES7Q9BYE0 225 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 LRIT1Q9P2V4 623 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 XRCC3O43542 346 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 SDC3O75056 442 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 CHRNA1P02708 482 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 SYPP08247 313 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 NPY1RP25929 384 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 NUP43Q8NFH3 380 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 OR8U1Q8NH10 309 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 WDR6Q9NNW5 1121 aaKnown RBP12.67□□□□□ -0.38
HIPK3-202ENST00000379016 GPR160Q9UJ42 338 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 UNC119BA6NIH7 251 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 DUX1O43812 170 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 ESR1P03372 595 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 GAAP10253 952 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 HLA-EP13747 358 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 FADDQ13158 208 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 TESK1Q15569 626 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 SMUG1Q53HV7 270 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 C6orf132Q5T0Z8 1188 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 NXPE4Q6UWF7 544 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 SYT14Q8NB59 555 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 UBAC2Q8NBM4 344 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 CLEC1AQ8NC01 280 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 OR2T33Q8NG76 320 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 DNAJB4Q9UDY4 337 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 A0A1W2PQ09 198 aa12.67□□□□□ -0.38
HIPK3-202ENST00000379016 CNTN5O94779 1100 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms