RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 MOSPD2Q8NHP6 518 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 PRRG4Q9BZD6 226 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 FAIMQ9NVQ4 179 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 SPHK1Q9NYA1 384 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 IGLV3-16A0A075B6K0 115 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 INMTO95050 263 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 SNX4O95219 450 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 AK1P00568 194 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 ZNF3P17036 446 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 SMAD4Q13485 552 aaKnown RBP13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 CLCA4Q14CN2 919 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 C18orf63Q68DL7 685 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 CBLL1Q75N03 491 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 NLRP8Q86W28 1048 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 HORMAD2Q8N7B1 307 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 DNAJA3Q96EY1 480 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 CD300AQ9UGN4 299 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 ZNF221Q9UK13 617 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 ADAM29Q9UKF5 820 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 ITGB1BP2Q9UKP3 347 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 MKL2Q9ULH7 1088 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 TMEM5Q9Y2B1 443 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 HS3ST3A1Q9Y663 406 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 SCO2O43819 266 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 PRKRAO75569 313 aaKnown RBP13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 CEACAM5P06731 702 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 PHC1P78364 1004 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 Q6ZS52 159 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 SDR16C5Q8N3Y7 309 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 MFSD9Q8NBP5 474 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 TANKQ92844 425 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 METTL7AQ9H8H3 244 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 SNTG1Q9NSN8 517 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 NFKBIL1Q9UBC1 381 aaPredicted RBP13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 PPT2Q9UMR5 302 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 CLEC4AQ9UMR7 237 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 CEPT1Q9Y6K0 416 aa13.39□□□□□ -0.27
SHROOM1-203ENST00000378679 TRIM64CA6NLI5 447 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 TMX2-CTNND1H3BSU7 103 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 DBIP07108 87 aaKnown RBP13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 GIMD1P0DJR0 217 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 GP1BBP13224 206 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 PKLRP30613 574 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 KIAA1024LP59773 190 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 COX10Q12887 443 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 ERV3-1Q14264 604 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 PYDC2Q56P42 97 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 DLEU7Q6UYE1 221 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 GNPDA2Q8TDQ7 276 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 C17orf50Q8WW18 174 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 UFD1Q92890 307 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 ZNF597Q96LX8 424 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 EPYCQ99645 322 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 TUBA8Q9NY65 449 aaPredicted RBP13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 ZNF225Q9UK10 706 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 ATG4BQ9Y4P1 393 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 GMEB1Q9Y692 573 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 SOX30O94993 753 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 GPR75O95800 540 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 BCL6P41182 706 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 PLCXD2Q0VAA5 305 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 CBLBQ13191 982 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 TMEM151BQ8IW70 566 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 OR6C4Q8NGE1 309 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 ANKRD60Q9BZ19 345 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 C14orf105Q9NVL8 296 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 OXSR1O95747 527 aaPredicted RBP13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 MYF6P23409 242 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 GCGRP47871 477 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 HLCSP50747 726 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 MOGQ16653 247 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 ZSWIM7Q19AV6 140 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 LRIT3Q3SXY7 679 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 TPRG1LQ5T0D9 272 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 ABHD17CQ6PCB6 329 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 SHISA6Q6ZSJ9 500 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 UXS1Q8NBZ7 420 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 OR4K17Q8NGC6 315 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 OR8J1Q8NGP2 316 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 ZFP90Q8TF47 636 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 TM4SF18Q96CE8 201 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 OR4K3Q96R72 315 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 TREX2Q9BQ50 279 aaPredicted RBP13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 SGPP1Q9BX95 441 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 DEFB126Q9BYW3 111 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 TRIM2Q9C040 744 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 CXorf36Q9H7Y0 433 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 SERINC1Q9NRX5 453 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 ERVK-18Q9QC07 812 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 ABCG2Q9UNQ0 655 aa13.38□□□□□ -0.27
SHROOM1-203ENST00000378679 OTOL1A6NHN0 477 aaPredicted RBP13.37□□□□□ -0.27
SHROOM1-203ENST00000378679 KCNK5O95279 499 aa13.37□□□□□ -0.27
SHROOM1-203ENST00000378679 DCNP07585 359 aaKnown RBP13.37□□□□□ -0.27
SHROOM1-203ENST00000378679 HOXD12P35452 270 aa13.37□□□□□ -0.27
SHROOM1-203ENST00000378679 MAP2K4P45985 399 aa13.37□□□□□ -0.27
SHROOM1-203ENST00000378679 GPR4P46093 362 aa13.37□□□□□ -0.27
SHROOM1-203ENST00000378679 RACK1P63244 317 aaKnown RBP13.37□□□□□ -0.27
SHROOM1-203ENST00000378679 HOXC5Q00444 222 aa13.37□□□□□ -0.27
SHROOM1-203ENST00000378679 EXOSC7Q15024 291 aaKnown RBP13.37□□□□□ -0.27
SHROOM1-203ENST00000378679 PON3Q15166 354 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms