RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 TSSK6Q9BXA6 273 aa7.96□□□□□ -1.13
CRNKL1-202ENST00000377340 TTTY10Q9BZA0 68 aa7.96□□□□□ -1.13
CRNKL1-202ENST00000377340 MBD1Q9UIS9 605 aaPredicted RBP7.96□□□□□ -1.13
CRNKL1-202ENST00000377340 POU2F3Q9UKI9 436 aa7.96□□□□□ -1.13
CRNKL1-202ENST00000377340 WBP11Q9Y2W2 641 aaKnown RBP7.96□□□□□ -1.13
CRNKL1-202ENST00000377340 IFT52Q9Y366 437 aa7.96□□□□□ -1.13
CRNKL1-202ENST00000377340 NOX1Q9Y5S8 564 aa7.96□□□□□ -1.13
CRNKL1-202ENST00000377340 NINQ8N4C6 2090 aa7.96□□□□□ -1.13
CRNKL1-202ENST00000377340 FAM25AB3EWG3 89 aa7.96□□□□□ -1.13
CRNKL1-202ENST00000377340 FAM25CB3EWG5 89 aa7.96□□□□□ -1.13
CRNKL1-202ENST00000377340 FAM25GB3EWG6 89 aa7.96□□□□□ -1.13
CRNKL1-202ENST00000377340 UBFD1O14562 309 aaKnown RBP7.96□□□□□ -1.13
CRNKL1-202ENST00000377340 NUDT21O43809 227 aaKnown RBP7.96□□□□□ -1.13
CRNKL1-202ENST00000377340 GFRA3O60609 400 aa7.96□□□□□ -1.13
CRNKL1-202ENST00000377340 H6PDO95479 791 aa7.96□□□□□ -1.13
CRNKL1-202ENST00000377340 RENP00797 406 aa7.96□□□□□ -1.13
CRNKL1-202ENST00000377340 RETP07949 1114 aa7.96□□□□□ -1.13
CRNKL1-202ENST00000377340 CD63P08962 238 aa7.96□□□□□ -1.13
CRNKL1-202ENST00000377340 GNALP38405 381 aa7.96□□□□□ -1.13
CRNKL1-202ENST00000377340 BTG2P78543 158 aa7.96□□□□□ -1.13
CRNKL1-202ENST00000377340 TLR1Q15399 786 aa7.96□□□□□ -1.13
CRNKL1-202ENST00000377340 SLC5A12Q1EHB4 618 aa7.96□□□□□ -1.13
CRNKL1-202ENST00000377340 UGT3A2Q3SY77 523 aa7.96□□□□□ -1.13
CRNKL1-202ENST00000377340 FGD2Q7Z6J4 655 aa7.96□□□□□ -1.13
CRNKL1-202ENST00000377340 ZNF595Q8IYB9 648 aa7.96□□□□□ -1.13
CRNKL1-202ENST00000377340 ZNF100Q8IYN0 542 aa7.96□□□□□ -1.13
CRNKL1-202ENST00000377340 SVOPQ8N4V2 548 aa7.96□□□□□ -1.13
CRNKL1-202ENST00000377340 ZNF433Q8N7K0 673 aaPredicted RBP7.96□□□□□ -1.13
CRNKL1-202ENST00000377340 OR2AJ1Q8NGZ0 328 aa7.96□□□□□ -1.13
CRNKL1-202ENST00000377340 ZFPM2Q8WW38 1151 aa7.96□□□□□ -1.13
CRNKL1-202ENST00000377340 POP5Q969H6 163 aaKnown RBP7.96□□□□□ -1.13
CRNKL1-202ENST00000377340 THOC3Q96J01 351 aaKnown RBP7.96□□□□□ -1.13
CRNKL1-202ENST00000377340 RBP7Q96R05 134 aa7.96□□□□□ -1.13
CRNKL1-202ENST00000377340 ZNF160Q9HCG1 818 aa7.96□□□□□ -1.13
CRNKL1-202ENST00000377340 TRPV5Q9NQA5 729 aa7.96□□□□□ -1.13
CRNKL1-202ENST00000377340 CKAP5Q14008 2032 aa7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 GREM1O60565 184 aa7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 ALOX12BO75342 701 aa7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 BCAS2O75934 225 aaPredicted RBP7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 ABOP16442 354 aa7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 GSTM2P28161 218 aa7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 CDK9P50750 372 aaKnown RBP7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 RAB38P57729 211 aa7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 STARD6P59095 220 aa7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 PUM1Q14671 1186 aaKnown RBP eCLIP7.96□□□□□ -1.142e-6■■□□□ 14.5
CRNKL1-202ENST00000377340 ALG10BQ5I7T1 473 aa7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 CYHR1Q6ZMK1 362 aa7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 OLIG3Q7RTU3 272 aa7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 CLEC14AQ86T13 490 aa7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 NLRP8Q86W28 1048 aa7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 BAHD1Q8TBE0 780 aaPredicted RBP7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 ABTB1Q969K4 478 aaPredicted RBP7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 TMBIM1Q969X1 311 aa7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 C1GALT1C1Q96EU7 318 aa7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 SH3GL3Q99963 347 aa7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 UTP23Q9BRU9 249 aaKnown RBP7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 COQ10BQ9H8M1 238 aa7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 SLAMF8Q9P0V8 285 aa7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 ACTR3BQ9P1U1 418 aa7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 TCF20Q9UGU0 1960 aaKnown RBP7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 IGHV5-51A0A0C4DH38 117 aa7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 LRIT2A6NDA9 550 aa7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 M0R3H8 397 aa7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 PLPP1O14494 284 aa7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 LSM1O15116 133 aaKnown RBP7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 ICAM2P13598 275 aa7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 CD46P15529 392 aa7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 ACVR2AP27037 513 aa7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 REEP5Q00765 189 aa7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 KCNC4Q03721 635 aa7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 ODF4Q2M2E3 257 aa7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 METTL2BQ6P1Q9 378 aaKnown RBP7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 AAGABQ6PD74 315 aa7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 OPN5Q6U736 354 aa7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 RPS19BP1Q86WX3 136 aaKnown RBP7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 CLVS1Q8IUQ0 354 aaPredicted RBP7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 CHCHD4Q8N4Q1 142 aa7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 DUSP19Q8WTR2 217 aa7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 TSLPQ969D9 159 aa7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 OR4K3Q96R72 315 aa7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 QRSL1Q9H0R6 528 aaKnown RBP7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 SMPD3Q9NY59 655 aaPredicted RBP7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 ZSWIM8A7E2V4 1837 aa7.96□□□□□ -1.14
CRNKL1-202ENST00000377340 IGHV1OR21-1A0A087WYE8 117 aa7.95□□□□□ -1.14
CRNKL1-202ENST00000377340 STK17BO94768 372 aa7.95□□□□□ -1.14
CRNKL1-202ENST00000377340 NUDT6P53370 316 aa7.95□□□□□ -1.14
CRNKL1-202ENST00000377340 INAQ16352 499 aa7.95□□□□□ -1.14
CRNKL1-202ENST00000377340 SGCAQ16586 387 aa7.95□□□□□ -1.14
CRNKL1-202ENST00000377340 PMS2CLQ68D20 193 aa7.95□□□□□ -1.14
CRNKL1-202ENST00000377340 CNEP1R1Q8N9A8 125 aa7.95□□□□□ -1.14
CRNKL1-202ENST00000377340 TOR1AIP2Q8NFQ8 470 aa7.95□□□□□ -1.14
CRNKL1-202ENST00000377340 OR52N2Q8NGI0 321 aa7.95□□□□□ -1.14
CRNKL1-202ENST00000377340 BBS10Q8TAM1 723 aa7.95□□□□□ -1.14
CRNKL1-202ENST00000377340 MTERF3Q96E29 417 aa7.95□□□□□ -1.14
CRNKL1-202ENST00000377340 TRAPPC9Q96Q05 1148 aa7.95□□□□□ -1.14
CRNKL1-202ENST00000377340 OR5B2Q96R09 309 aa7.95□□□□□ -1.14
CRNKL1-202ENST00000377340 ZNF717Q9BY31 904 aaPredicted RBP7.95□□□□□ -1.14
CRNKL1-202ENST00000377340 PITHD1Q9GZP4 211 aaPredicted RBP7.95□□□□□ -1.14
CRNKL1-202ENST00000377340 MTHFD2LQ9H903 347 aaPredicted RBP7.95□□□□□ -1.14
CRNKL1-202ENST00000377340 NANSQ9NR45 359 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms