RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 IL3P08700 152 aa19.2■□□□□ 0.66
VSX1-201ENST00000376707 CD1EP15812 388 aa19.2■□□□□ 0.66
VSX1-201ENST00000376707 CHN1P15882 459 aa19.2■□□□□ 0.66
VSX1-201ENST00000376707 DRD5P21918 477 aa19.2■□□□□ 0.66
VSX1-201ENST00000376707 SOX18P35713 384 aa19.2■□□□□ 0.66
VSX1-201ENST00000376707 PPICP45877 212 aa19.2■□□□□ 0.66
VSX1-201ENST00000376707 PKNOX1P55347 436 aa19.2■□□□□ 0.66
VSX1-201ENST00000376707 SNTA1Q13424 505 aa19.2■□□□□ 0.66
VSX1-201ENST00000376707 NSUN5P2Q63ZY6 315 aa19.2■□□□□ 0.66
VSX1-201ENST00000376707 YRDCQ86U90 279 aaKnown RBP19.2■□□□□ 0.66
VSX1-201ENST00000376707 CCDC116Q8IYX3 515 aa19.2■□□□□ 0.66
VSX1-201ENST00000376707 GBP7Q8N8V2 638 aaPredicted RBP19.2■□□□□ 0.66
VSX1-201ENST00000376707 FAM83FQ8NEG4 500 aaPredicted RBP19.2■□□□□ 0.66
VSX1-201ENST00000376707 NRGNQ92686 78 aa19.2■□□□□ 0.66
VSX1-201ENST00000376707 NTNG2Q96CW9 530 aa19.2■□□□□ 0.66
VSX1-201ENST00000376707 L2HGDHQ9H9P8 463 aa19.2■□□□□ 0.66
VSX1-201ENST00000376707 GALNT9Q9HCQ5 603 aa19.2■□□□□ 0.66
VSX1-201ENST00000376707 HEY2Q9UBP5 337 aa19.2■□□□□ 0.66
VSX1-201ENST00000376707 EMCNQ9ULC0 261 aa19.2■□□□□ 0.66
VSX1-201ENST00000376707 DLGAP4Q9Y2H0 992 aa19.2■□□□□ 0.66
VSX1-201ENST00000376707 CELSR1Q9NYQ6 3014 aa19.2■□□□□ 0.66
VSX1-201ENST00000376707 C2orf72A6NCS6 295 aa19.19■□□□□ 0.66
VSX1-201ENST00000376707 PRAMEF25A6NGN4 478 aa19.19■□□□□ 0.66
VSX1-201ENST00000376707 FRG2CA6NGY1 282 aa19.19■□□□□ 0.66
VSX1-201ENST00000376707 SNPHO15079 494 aa19.19■□□□□ 0.66
VSX1-201ENST00000376707 UGT2B11O75310 529 aa19.19■□□□□ 0.66
VSX1-201ENST00000376707 CTAG2O75638 210 aa19.19■□□□□ 0.66
VSX1-201ENST00000376707 BCAS2O75934 225 aaPredicted RBP19.19■□□□□ 0.66
VSX1-201ENST00000376707 ENO1P06733 434 aaKnown RBP19.19■□□□□ 0.66
VSX1-201ENST00000376707 DRD2P14416 443 aa19.19■□□□□ 0.66
VSX1-201ENST00000376707 DNAJA1P31689 397 aaKnown RBP19.19■□□□□ 0.66
VSX1-201ENST00000376707 EMDP50402 254 aa19.19■□□□□ 0.66
VSX1-201ENST00000376707 ART1P52961 327 aa19.19■□□□□ 0.66
VSX1-201ENST00000376707 NAGLUP54802 743 aa19.19■□□□□ 0.66
VSX1-201ENST00000376707 ACSM2AQ08AH3 577 aa19.19■□□□□ 0.66
VSX1-201ENST00000376707 SPIN4Q56A73 249 aa19.19■□□□□ 0.66
VSX1-201ENST00000376707 DCST1Q5T197 706 aa19.19■□□□□ 0.66
VSX1-201ENST00000376707 ACSM2BQ68CK6 577 aa19.19■□□□□ 0.66
VSX1-201ENST00000376707 SAMD14Q8IZD0 417 aaPredicted RBP19.19■□□□□ 0.66
VSX1-201ENST00000376707 ZNF675Q8TD23 568 aa19.19■□□□□ 0.66
VSX1-201ENST00000376707 RNASE6Q93091 150 aaKnown RBP19.19■□□□□ 0.66
VSX1-201ENST00000376707 CCDC126Q96EE4 140 aa19.19■□□□□ 0.66
VSX1-201ENST00000376707 WDYHV1Q96HA8 205 aa19.19■□□□□ 0.66
VSX1-201ENST00000376707 SH3GL2Q99962 352 aa19.19■□□□□ 0.66
VSX1-201ENST00000376707 POLDIP3Q9BY77 421 aaKnown RBP19.19■□□□□ 0.66
VSX1-201ENST00000376707 ACPTQ9BZG2 426 aa19.19■□□□□ 0.66
VSX1-201ENST00000376707 PPCSQ9HAB8 311 aa19.19■□□□□ 0.66
VSX1-201ENST00000376707 SERHLQ9NQF3 203 aa19.19■□□□□ 0.66
VSX1-201ENST00000376707 GIMAP4Q9NUV9 329 aa19.19■□□□□ 0.66
VSX1-201ENST00000376707 CRIM1Q9NZV1 1036 aa19.19■□□□□ 0.66
VSX1-201ENST00000376707 MAPRE3Q9UPY8 281 aa19.19■□□□□ 0.66
VSX1-201ENST00000376707 A0A1W2PPM1 405 aa19.18■□□□□ 0.66
VSX1-201ENST00000376707 SERTM1A2A2V5 107 aa19.18■□□□□ 0.66
VSX1-201ENST00000376707 CCDC151A5D8V7 595 aa19.18■□□□□ 0.66
VSX1-201ENST00000376707 CD8B2A6NJW9 211 aa19.18■□□□□ 0.66
VSX1-201ENST00000376707 G3V2L1 256 aa19.18■□□□□ 0.66
VSX1-201ENST00000376707 TO15178 435 aa19.18■□□□□ 0.66
VSX1-201ENST00000376707 GLRA3O75311 464 aa19.18■□□□□ 0.66
VSX1-201ENST00000376707 ACTL6AO96019 429 aa19.18■□□□□ 0.66
VSX1-201ENST00000376707 RCAN2Q14206 197 aa19.18■□□□□ 0.66
VSX1-201ENST00000376707 HEPACAMQ14CZ8 416 aa19.18■□□□□ 0.66
VSX1-201ENST00000376707 ZNF628Q5EBL2 1059 aa19.18■□□□□ 0.66
VSX1-201ENST00000376707 TDRPQ86YL5 185 aa19.18■□□□□ 0.66
VSX1-201ENST00000376707 TMBIM1Q969X1 311 aa19.18■□□□□ 0.66
VSX1-201ENST00000376707 EXOSC8Q96B26 276 aaKnown RBP19.18■□□□□ 0.66
VSX1-201ENST00000376707 TMCO6Q96DC7 493 aa19.18■□□□□ 0.66
VSX1-201ENST00000376707 C11orf24Q96F05 449 aaPredicted RBP19.18■□□□□ 0.66
VSX1-201ENST00000376707 GSTO2Q9H4Y5 243 aa19.18■□□□□ 0.66
VSX1-201ENST00000376707 FOXD3Q9UJU5 478 aaPredicted RBP19.18■□□□□ 0.66
VSX1-201ENST00000376707 EXO1Q9UQ84 846 aaKnown RBP19.18■□□□□ 0.66
VSX1-201ENST00000376707 GPR55Q9Y2T6 319 aaPredicted RBP19.18■□□□□ 0.66
VSX1-201ENST00000376707 HIVEP1P15822 2718 aa19.18■□□□□ 0.66
VSX1-201ENST00000376707 REM1O75628 298 aa19.17■□□□□ 0.66
VSX1-201ENST00000376707 CBR3O75828 277 aa19.17■□□□□ 0.66
VSX1-201ENST00000376707 SHBGP04278 402 aa19.17■□□□□ 0.66
VSX1-201ENST00000376707 PTGDSP41222 190 aa19.17■□□□□ 0.66
VSX1-201ENST00000376707 HTR6P50406 440 aa19.17■□□□□ 0.66
VSX1-201ENST00000376707 ZNF136P52737 540 aa19.17■□□□□ 0.66
VSX1-201ENST00000376707 NAA20P61599 178 aa19.17■□□□□ 0.66
VSX1-201ENST00000376707 RAE1P78406 368 aaKnown RBP19.17■□□□□ 0.66
VSX1-201ENST00000376707 HMGCS1Q01581 520 aa19.17■□□□□ 0.66
VSX1-201ENST00000376707 ERCC6LQ2NKX8 1250 aa19.17■□□□□ 0.66
VSX1-201ENST00000376707 FBXL19-AS1Q494R0 122 aa19.17■□□□□ 0.66
VSX1-201ENST00000376707 GALNT18Q6P9A2 607 aa19.17■□□□□ 0.66
VSX1-201ENST00000376707 ZYG11AQ6WRX3 759 aa19.17■□□□□ 0.66
VSX1-201ENST00000376707 OR9A2Q8NGT5 310 aa19.17■□□□□ 0.66
VSX1-201ENST00000376707 OR14L1PQ8NHC6 308 aa19.17■□□□□ 0.66
VSX1-201ENST00000376707 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.17■□□□□ 0.66
VSX1-201ENST00000376707 KAT2AQ92830 837 aa19.17■□□□□ 0.66
VSX1-201ENST00000376707 ERP27Q96DN0 273 aa19.17■□□□□ 0.66
VSX1-201ENST00000376707 COL21A1Q96P44 957 aa19.17■□□□□ 0.66
VSX1-201ENST00000376707 GPATCH1Q9BRR8 931 aaKnown RBP19.17■□□□□ 0.66
VSX1-201ENST00000376707 ANKRA2Q9H9E1 313 aa19.17■□□□□ 0.66
VSX1-201ENST00000376707 CALHM2Q9HA72 323 aa19.17■□□□□ 0.66
VSX1-201ENST00000376707 MBD3L4A6NDZ8 208 aaPredicted RBP19.16■□□□□ 0.66
VSX1-201ENST00000376707 MBD3L3A6NE82 208 aaPredicted RBP19.16■□□□□ 0.66
VSX1-201ENST00000376707 OR6C70A6NIJ9 312 aa19.16■□□□□ 0.66
VSX1-201ENST00000376707 MBD3L5A6NJ08 208 aaPredicted RBP19.16■□□□□ 0.66
VSX1-201ENST00000376707 ABCB7O75027 752 aa19.16■□□□□ 0.66
VSX1-201ENST00000376707 PROCP04070 461 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms