RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 DEC1Q9P2X7 70 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 A0A1W2PQL4 384 aaPredicted RBP10.03□□□□□ -0.8
ABCF1-202ENST00000376545 A0A1W2PR48 441 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 HMX3A6NHT5 357 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 KLF4O43474 513 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 CLEC2LP0C7M8 214 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 GABRA5P31644 462 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 DRD3P35462 400 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 BCL6P41182 706 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 ANXA11P50995 505 aaKnown RBP10.03□□□□□ -0.8
ABCF1-202ENST00000376545 SCN1BQ07699 218 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 RSBN1Q5VWQ0 802 aaPredicted RBP10.03□□□□□ -0.8
ABCF1-202ENST00000376545 SLC27A4Q6P1M0 643 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 BHLHB9Q6PI77 547 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 ZNF730Q6ZMV8 503 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 PRICKLE2Q7Z3G6 844 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 LAPTM4BQ86VI4 370 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 ARIH2OSQ8N7S6 290 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 OR56A1Q8NGH5 318 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 OR2L8Q8NGY9 312 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 RNFT2Q96EX2 444 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 KCTD7Q96MP8 289 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 C17orf62Q9BQA9 187 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 SLC38A1Q9H2H9 487 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 EGLN3Q9H6Z9 239 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 IL23AQ9NPF7 189 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 EXOGQ9Y2C4 368 aaKnown RBP10.03□□□□□ -0.8
ABCF1-202ENST00000376545 CARD8Q9Y2G2 431 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 KCNE3Q9Y6H6 103 aa10.03□□□□□ -0.8
ABCF1-202ENST00000376545 PRRC2BQ5JSZ5 2229 aaKnown RBP10.03□□□□□ -0.8
ABCF1-202ENST00000376545 FAM172BPA6NC97 362 aa10.02□□□□□ -0.8
ABCF1-202ENST00000376545 C1QTNF3-AMACRE9PGA6 284 aa10.02□□□□□ -0.8
ABCF1-202ENST00000376545 POLR1CO15160 346 aaPredicted RBP10.02□□□□□ -0.8
ABCF1-202ENST00000376545 CYP7B1O75881 506 aa10.02□□□□□ -0.8
ABCF1-202ENST00000376545 UBXN7O94888 489 aa10.02□□□□□ -0.8
ABCF1-202ENST00000376545 HMGN2P05204 90 aaKnown RBP10.02□□□□□ -0.8
ABCF1-202ENST00000376545 PKLRP30613 574 aa10.02□□□□□ -0.8
ABCF1-202ENST00000376545 NTSP30990 170 aa10.02□□□□□ -0.8
ABCF1-202ENST00000376545 SSR2P43308 183 aa10.02□□□□□ -0.8
ABCF1-202ENST00000376545 TSFMP43897 325 aaKnown RBP10.02□□□□□ -0.8
ABCF1-202ENST00000376545 CLCNKAP51800 687 aa10.02□□□□□ -0.8
ABCF1-202ENST00000376545 RPS25P62851 125 aaKnown RBP10.02□□□□□ -0.8
ABCF1-202ENST00000376545 HNRNPA0Q13151 305 aaKnown RBP10.02□□□□□ -0.8
ABCF1-202ENST00000376545 SLC9A5Q14940 896 aa10.02□□□□□ -0.8
ABCF1-202ENST00000376545 SNAPC1Q16533 368 aa10.02□□□□□ -0.8
ABCF1-202ENST00000376545 SLC35F1Q5T1Q4 408 aa10.02□□□□□ -0.8
ABCF1-202ENST00000376545 C22orf42Q6IC83 251 aa10.02□□□□□ -0.8
ABCF1-202ENST00000376545 ABHD17CQ6PCB6 329 aa10.02□□□□□ -0.8
ABCF1-202ENST00000376545 Q8N9G6 341 aaPredicted RBP10.02□□□□□ -0.8
ABCF1-202ENST00000376545 TRPC4Q9UBN4 977 aa10.02□□□□□ -0.8
ABCF1-202ENST00000376545 MRPS23Q9Y3D9 190 aaKnown RBP10.02□□□□□ -0.8
ABCF1-202ENST00000376545 SPIN1Q9Y657 262 aaPredicted RBP10.02□□□□□ -0.8
ABCF1-202ENST00000376545 CKAP5Q14008 2032 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 TRDV1A0A1B0GX56 115 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 MEIOCA2RUB1 952 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 IGLON5A6NGN9 336 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 SNTNA6NMZ2 147 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 PGRMC2O15173 223 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 PRKRAO75569 313 aaKnown RBP10.02□□□□□ -0.81
ABCF1-202ENST00000376545 NFATC1O95644 943 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 PCCBP05166 539 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 ALPPP05187 535 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 FHP07954 510 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 SLC35G4P0C7Q5 338 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 NR2F6P10588 404 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 HIST1H1TP22492 207 aaPredicted RBP10.02□□□□□ -0.81
ABCF1-202ENST00000376545 SDC2P34741 201 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 GPC1P35052 558 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 AHRP35869 848 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 VIPR2P41587 438 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 MTNR1AP48039 350 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 RAB28P51157 221 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 SLAMF1Q13291 335 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 RIN1Q13671 783 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 ARMC4Q5T2S8 1044 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 OR2G6Q5TZ20 316 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 AADACL4Q5VUY2 407 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 GJD3Q8N144 294 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 ANKK1Q8NFD2 765 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 RNF170Q96K19 258 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 ZNF681Q96N22 645 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 SLC22A4Q9H015 551 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 SYNDIG1Q9H7V2 258 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 ATG4BQ9Y4P1 393 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 KRT8P05787 483 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 MYL12AP19105 171 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 ATP5A1P25705 553 aaKnown RBP10.02□□□□□ -0.81
ABCF1-202ENST00000376545 PTBP1P26599 531 aaKnown RBP eCLIP10.02□□□□□ -0.81
ABCF1-202ENST00000376545 IL12RB1P42701 662 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 FABP5Q01469 135 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 ZNF155Q12901 538 aaPredicted RBP10.02□□□□□ -0.81
ABCF1-202ENST00000376545 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.02□□□□□ -0.811e-7■■■■□ 21.8
ABCF1-202ENST00000376545 AGBL4Q5VU57 503 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 SLC48A1Q6P1K1 146 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 GIMAP5Q96F15 307 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 C11orf49Q9H6J7 331 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 SLC6A20Q9NP91 592 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 TIGARQ9NQ88 270 aa10.02□□□□□ -0.81
ABCF1-202ENST00000376545 SEMA4GQ9NTN9 838 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms