RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 SNAPC3Q92966 411 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ZG16BQ96DA0 208 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 WFDC6Q9BQY6 131 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 DPH1Q9BZG8 443 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 HHATLQ9HCP6 504 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 MYO16Q9Y6X6 1858 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ORC5O43913 435 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 TMPRSS11DO60235 418 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 HCN1O60741 890 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 COQ9O75208 318 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 OR2B3O76000 313 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ASGR2P07307 311 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 PRLHRP49683 370 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 PRKCDQ05655 676 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 FGD2Q7Z6J4 655 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ZNF761Q86XN6 746 aaPredicted RBP13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 SFTPA1Q8IWL2 248 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 PHC2Q8IXK0 858 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 YIPF7Q8N8F6 280 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 CXorf40BQ96DE9 158 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 RSPH9Q9H1X1 276 aaPredicted RBP13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 SLAMF7Q9NQ25 335 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 SLC23A2Q9UGH3 650 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 WDR45Q9Y484 360 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 RTTNQ86VV8 2226 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 C12orf71A8MTZ7 269 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 SLC9A3R1O14745 358 aaPredicted RBP13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 PAHP00439 452 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 DDCP20711 480 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 KHKP50053 298 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 WNT4P56705 351 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ABATP80404 500 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 EIF4HQ15056 248 aaKnown RBP13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 TMEM31Q5JXX7 168 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 KLHL36Q8N4N3 616 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 CHCHD4Q8N4Q1 142 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ZNF296Q8WUU4 475 aaPredicted RBP13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 BCL7BQ9BQE9 202 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 HOXD1Q9GZZ0 328 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 WDR26Q9H7D7 661 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 RNF121Q9H920 327 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 SLC35C2Q9NQQ7 365 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 USP36Q9P275 1121 aaKnown RBP13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 RP1P56715 2156 aa13.58□□□□□ -0.24
TNFRSF1B-201ENST00000376259 A0A1W2PS29 197 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 RASGRP1O95267 797 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ZNF24P17028 368 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 MESP2Q0VG99 397 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 P2RY14Q15391 338 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ZER1Q7Z7L7 766 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 KLHDC8AQ8IYD2 350 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 NUP43Q8NFH3 380 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 OR8K3Q8NH51 312 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 SPRYD4Q8WW59 207 aaPredicted RBP13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 TRMT61AQ96FX7 289 aaKnown RBP13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 TRMT2BQ96GJ1 504 aaKnown RBP13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 PAWRQ96IZ0 340 aaKnown RBP13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 TXNDC15Q96J42 360 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ANKHQ9HCJ1 492 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 GALNT9Q9HCQ5 603 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 NLGN3Q9NZ94 848 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 IQCMA0A1B0GVH7 501 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 A0A1B0GVT2 93 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 GCM2O75603 506 aaPredicted RBP13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 HBQ1P09105 142 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 MPIP34949 423 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 HNRNPFP52597 415 aaKnown RBP13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 FAM27D1Q5T7N8 215 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 C11orf88Q6PI97 169 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 VASH1Q7L8A9 365 aaPredicted RBP13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 CPA6Q8N4T0 437 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 OR56A3Q8NH54 315 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 OR2B2Q9GZK3 357 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 PCDHGB1Q9Y5G3 927 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 PRAMEF25A6NGN4 478 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 AKAP8O43823 692 aaKnown RBP13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 OR10H2O60403 315 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 UGDHO60701 494 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 CD3GP09693 182 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ADRB3P13945 408 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 CST5P28325 142 aaPredicted RBP13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 FXNQ16595 210 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 FAM71E1Q6IPT2 247 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 PGBD2Q6P3X8 592 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 SLC36A4Q6YBV0 504 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 SERPINA12Q8IW75 414 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 RASSF5Q8WWW0 418 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 NXPE3Q969Y0 559 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 KLHL31Q9H511 634 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 NANSQ9NR45 359 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 EIF3KQ9UBQ5 218 aaKnown RBP13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 RPS6KB2Q9UBS0 482 aa13.57□□□□□ -0.24
TNFRSF1B-201ENST00000376259 SH3D21A4FU49 640 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ZSCAN5BA6NJL1 495 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 TEX46H3BTG2 121 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 SOCS6O14544 535 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 AKR7A2O43488 359 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 HLA-DPB1P04440 258 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 HOXB3P14651 431 aaPredicted RBP13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 HTR3AP46098 478 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms