RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 TMEM81Q6P7N7 255 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 ARSKQ6UWY0 536 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 CASP12Q6UXS9 341 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 ZFP41Q8N8Y5 198 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 LMNTD1Q8N9Z9 388 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 LSM14AQ8ND56 463 aaKnown RBP12.19□□□□□ -0.46
MSH5-204ENST00000375755 RANBP3Q9H6Z4 567 aaPredicted RBP12.19□□□□□ -0.46
MSH5-204ENST00000375755 ERVMER34-1Q9H9K5 563 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 RAB23Q9ULC3 237 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 ARRDC5A6NEK1 342 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 SLC30A4O14863 429 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 LANCL1O43813 399 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 MTRF1O75570 445 aaKnown RBP12.19□□□□□ -0.46
MSH5-204ENST00000375755 RRASP10301 218 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 RHCEP18577 417 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 SLC6A1P30531 599 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 BMP8BP34820 402 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 OPRD1P41143 372 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 SLC6A12P48065 614 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 CTSCP53634 463 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 LIM2P55344 173 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 RAE1P78406 368 aaKnown RBP12.19□□□□□ -0.46
MSH5-204ENST00000375755 ACSM2AQ08AH3 577 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 HEPACAMQ14CZ8 416 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 DUSP6Q16828 381 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 PLA1AQ53H76 456 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 ACSM2BQ68CK6 577 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 UBE2R2Q712K3 238 aaPredicted RBP12.19□□□□□ -0.46
MSH5-204ENST00000375755 BMP8AQ7Z5Y6 402 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 VPS37AQ8NEZ2 397 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 OR4K1Q8NGD4 311 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 OR8J1Q8NGP2 316 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 GATAD2BQ8WXI9 593 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 CHFRQ96EP1 664 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 RPP25Q9BUL9 199 aaKnown RBP12.19□□□□□ -0.46
MSH5-204ENST00000375755 RUVBL1Q9Y265 456 aaKnown RBP12.19□□□□□ -0.46
MSH5-204ENST00000375755 COL4A3Q01955 1670 aa12.19□□□□□ -0.46
MSH5-204ENST00000375755 SHISA3A0PJX4 238 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 STK25O00506 426 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 PRKYO43930 277 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 RAB36O95755 333 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 CFDP00746 253 aaPredicted RBP12.18□□□□□ -0.46
MSH5-204ENST00000375755 ADAP00813 363 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 ATP1B2P14415 290 aaPredicted RBP12.18□□□□□ -0.46
MSH5-204ENST00000375755 CXCL3P19876 107 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 FCARP24071 287 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 CCT3P49368 545 aaKnown RBP12.18□□□□□ -0.46
MSH5-204ENST00000375755 XKP51811 444 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 C21orf58P58505 322 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 SRP54P61011 504 aaKnown RBP12.18□□□□□ -0.46
MSH5-204ENST00000375755 POLR2LP62875 67 aaKnown RBP12.18□□□□□ -0.46
MSH5-204ENST00000375755 HBA1P69905 142 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 CDK6Q00534 326 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 EEF1A2Q05639 463 aaKnown RBP12.18□□□□□ -0.46
MSH5-204ENST00000375755 ZMYND11Q15326 602 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 LGALSLQ3ZCW2 172 aaPredicted RBP12.18□□□□□ -0.46
MSH5-204ENST00000375755 FNDC3BQ53EP0 1204 aaKnown RBP12.18□□□□□ -0.46
MSH5-204ENST00000375755 ZNF805Q5CZA5 627 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 COL13A1Q5TAT6 717 aaPredicted RBP12.18□□□□□ -0.46
MSH5-204ENST00000375755 UNC5DQ6UXZ4 953 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 ASB18Q6ZVZ8 466 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 HDDC2Q7Z4H3 204 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 RBP7Q96R05 134 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 MTIF3Q9H2K0 278 aaKnown RBP12.18□□□□□ -0.46
MSH5-204ENST00000375755 PPA2Q9H2U2 334 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 CDCP1Q9H5V8 836 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 EMC7Q9NPA0 242 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 CUEDC1Q9NWM3 386 aaPredicted RBP12.18□□□□□ -0.46
MSH5-204ENST00000375755 TVP23BQ9NYZ1 205 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 EXO1Q9UQ84 846 aaKnown RBP12.18□□□□□ -0.46
MSH5-204ENST00000375755 TLX2O43763 284 aaPredicted RBP12.18□□□□□ -0.46
MSH5-204ENST00000375755 ETHE1O95571 254 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 JUPP14923 745 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 WASP42768 502 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 MAP2K6P52564 334 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 WNT4P56705 351 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 OCLNQ16625 522 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 KLHL12Q53G59 568 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 BICRALQ6AI39 1079 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 ADNP2Q6IQ32 1131 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 LIPIQ6XZB0 460 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 ADGRG3Q86Y34 549 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 BMPERQ8N8U9 685 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 PLA2G15Q8NCC3 412 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 CEP76Q8TAP6 659 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 SMARCD2Q92925 531 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 ARRDC3Q96B67 414 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 SLC35A5Q9BS91 424 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 HDHD2Q9H0R4 259 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 ATG10Q9H0Y0 220 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 GHITMQ9H3K2 345 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 C1GALT1Q9NS00 363 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 ZNF282Q9UDV7 671 aaPredicted RBP12.18□□□□□ -0.46
MSH5-204ENST00000375755 NINQ8N4C6 2090 aa12.18□□□□□ -0.46
MSH5-204ENST00000375755 IGLV3-16A0A075B6K0 115 aa12.17□□□□□ -0.46
MSH5-204ENST00000375755 TRAV6A0A075B6T7 132 aa12.17□□□□□ -0.46
MSH5-204ENST00000375755 SERTM1A2A2V5 107 aa12.17□□□□□ -0.46
MSH5-204ENST00000375755 TOR1AO14656 332 aa12.17□□□□□ -0.46
MSH5-204ENST00000375755 LZTS3O60299 673 aaPredicted RBP12.17□□□□□ -0.46
MSH5-204ENST00000375755 PPM1BO75688 479 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms