RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 HNRNPA1P09651 372 aaKnown RBP eCLIP13.69□□□□□ -0.22
MSH5-201ENST00000375703 CSF3P09919 207 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 MLLT1Q03111 559 aaPredicted RBP13.69□□□□□ -0.22
MSH5-201ENST00000375703 HYAL2Q12891 473 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 ZFP69Q49AA0 526 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 TYW3Q6IPR3 259 aaKnown RBP13.69□□□□□ -0.22
MSH5-201ENST00000375703 FAM20CQ8IXL6 584 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 GDPD1Q8N9F7 314 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 ANKK1Q8NFD2 765 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 C16orf58Q96GQ5 468 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 C12orf66Q96MD2 445 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 TM9SF2Q99805 663 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 MED18Q9BUE0 208 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 TMEM245Q9H330 911 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 SF3B6Q9Y3B4 125 aaKnown RBP13.69□□□□□ -0.22
MSH5-201ENST00000375703 INSL6Q9Y581 213 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 KCNE3Q9Y6H6 103 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 KIF26AQ9ULI4 1882 aaPredicted RBP13.69□□□□□ -0.22
MSH5-201ENST00000375703 CCDC182A6NF36 153 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 HMX3A6NHT5 357 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 C1QTNF3-AMACRE9PGA6 284 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 CASC3O15234 703 aaKnown RBP13.69□□□□□ -0.22
MSH5-201ENST00000375703 CTNNB1P35222 781 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 IFNGR2P38484 337 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 DDOSTP39656 456 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 MAP4K2Q12851 820 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 ASAH1Q13510 395 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 WSCD2Q2TBF2 565 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 PYDC2Q56P42 97 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 KIAA1161Q6NSJ0 714 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 PRR23CQ6ZRP0 262 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 RRM2BQ7LG56 351 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 OR2A1Q8NGT9 310 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 SUSD6Q92537 303 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 UFD1Q92890 307 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 SLC38A2Q96QD8 506 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 SNX18Q96RF0 628 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 INSM2Q96T92 566 aaPredicted RBP13.69□□□□□ -0.22
MSH5-201ENST00000375703 KATNB1Q9BVA0 655 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 ISYNA1Q9NPH2 558 aa13.69□□□□□ -0.22
MSH5-201ENST00000375703 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.69□□□□□ -0.22
MSH5-201ENST00000375703 TCF20Q9UGU0 1960 aaKnown RBP13.68□□□□□ -0.22
MSH5-201ENST00000375703 FAM172BPA6NC97 362 aa13.68□□□□□ -0.22
MSH5-201ENST00000375703 C8orf89P0DMQ9 161 aa13.68□□□□□ -0.22
MSH5-201ENST00000375703 RPS5P46782 204 aaKnown RBP13.68□□□□□ -0.22
MSH5-201ENST00000375703 TBRG1Q3YBR2 411 aa13.68□□□□□ -0.22
MSH5-201ENST00000375703 TMEM35AQ53FP2 167 aa13.68□□□□□ -0.22
MSH5-201ENST00000375703 ZNF311Q5JNZ3 666 aa13.68□□□□□ -0.22
MSH5-201ENST00000375703 TMEM64Q6YI46 380 aa13.68□□□□□ -0.22
MSH5-201ENST00000375703 SHFQ7M4L6 423 aa13.68□□□□□ -0.22
MSH5-201ENST00000375703 TTLQ8NG68 377 aa13.68□□□□□ -0.22
MSH5-201ENST00000375703 OR8K5Q8NH50 307 aa13.68□□□□□ -0.22
MSH5-201ENST00000375703 TP53INP1Q96A56 240 aa13.68□□□□□ -0.22
MSH5-201ENST00000375703 RAB7BQ96AH8 199 aa13.68□□□□□ -0.22
MSH5-201ENST00000375703 DMRTB1Q96MA1 342 aa13.68□□□□□ -0.22
MSH5-201ENST00000375703 CAMK1GQ96NX5 476 aa13.68□□□□□ -0.22
MSH5-201ENST00000375703 HDAC8Q9BY41 377 aa13.68□□□□□ -0.22
MSH5-201ENST00000375703 OSGEPL1Q9H4B0 414 aa13.68□□□□□ -0.22
MSH5-201ENST00000375703 SLC13A4Q9UKG4 626 aa13.68□□□□□ -0.22
MSH5-201ENST00000375703 ACSL5Q9ULC5 683 aa13.68□□□□□ -0.22
MSH5-201ENST00000375703 EXOSC1Q9Y3B2 195 aaKnown RBP13.68□□□□□ -0.22
MSH5-201ENST00000375703 ATG4BQ9Y4P1 393 aa13.68□□□□□ -0.22
MSH5-201ENST00000375703 A0A1W2PR48 441 aa13.68□□□□□ -0.22
MSH5-201ENST00000375703 FAM170BA6NMN3 283 aa13.68□□□□□ -0.22
MSH5-201ENST00000375703 ERI3O43414 337 aaKnown RBP13.68□□□□□ -0.22
MSH5-201ENST00000375703 PCDH8O95206 1070 aa13.68□□□□□ -0.22
MSH5-201ENST00000375703 MRPS15P82914 257 aaKnown RBP13.68□□□□□ -0.22
MSH5-201ENST00000375703 TSPAN31Q12999 210 aa13.68□□□□□ -0.22
MSH5-201ENST00000375703 MADCAM1Q13477 382 aa13.68□□□□□ -0.22
MSH5-201ENST00000375703 MINDY4Q4G0A6 757 aa13.68□□□□□ -0.22
MSH5-201ENST00000375703 TMEM107Q6UX40 140 aa13.68□□□□□ -0.22
MSH5-201ENST00000375703 LHFPL3Q86UP9 236 aa13.68□□□□□ -0.22
MSH5-201ENST00000375703 SYT14Q8NB59 555 aa13.68□□□□□ -0.22
MSH5-201ENST00000375703 OR8D4Q8NGM9 314 aa13.68□□□□□ -0.22
MSH5-201ENST00000375703 SPPL3Q8TCT6 385 aa13.68□□□□□ -0.22
MSH5-201ENST00000375703 AP3S1Q92572 193 aa13.68□□□□□ -0.22
MSH5-201ENST00000375703 CNRIP1Q96F85 164 aaPredicted RBP13.68□□□□□ -0.22
MSH5-201ENST00000375703 C11orf54Q9H0W9 315 aaPredicted RBP13.68□□□□□ -0.22
MSH5-201ENST00000375703 CNIH4Q9P003 139 aa13.68□□□□□ -0.22
MSH5-201ENST00000375703 ASB4Q9Y574 426 aa13.68□□□□□ -0.22
MSH5-201ENST00000375703 OR1A2Q9Y585 309 aa13.68□□□□□ -0.22
MSH5-201ENST00000375703 TBC1D3BA6NDS4 549 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 ANTXRLA6NF34 631 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 POLR1CO15160 346 aaPredicted RBP13.67□□□□□ -0.22
MSH5-201ENST00000375703 FRS3O43559 492 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 FABP5Q01469 135 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 MLF2Q15773 248 aaPredicted RBP13.67□□□□□ -0.22
MSH5-201ENST00000375703 DUSP6Q16828 381 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 CLEC12AQ5QGZ9 265 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 ZNF730Q6ZMV8 503 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 QSOX2Q6ZRP7 698 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 UBE2J2Q8N2K1 259 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 OR52P1PQ8NH57 321 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 SFXN5Q8TD22 340 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 ZG16BQ96DA0 208 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 ARHGAP9Q9BRR9 750 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 ANKRA2Q9H9E1 313 aa13.67□□□□□ -0.22
MSH5-201ENST00000375703 NUP210Q8TEM1 1887 aaPredicted RBP13.67□□□□□ -0.22
MSH5-201ENST00000375703 CPSF4LA6NMK7 179 aaKnown RBP13.67□□□□□ -0.22
MSH5-201ENST00000375703 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms