RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 DISC1C4P0D8 188 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 TMEM189-UBE2V1I3L0A0 370 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 TNFP01375 233 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 NUDT7P0C024 238 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 GP1BBP13224 206 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 S1PR1P21453 382 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 CTSOP43234 321 aaPredicted RBP10.95□□□□□ -0.66
PTCH1-203ENST00000375274 SLC6A9P48067 706 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 SLC5A12Q1EHB4 618 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 LRRN1Q6UXK5 716 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 OR4N5Q8IXE1 308 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 PGBD5Q8N414 524 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 FTMTQ8N4E7 242 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 RNF175Q8N4F7 328 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 DOK4Q8TEW6 326 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 SMPDL3BQ92485 455 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 OR2M4Q96R27 311 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 SLA2Q9H6Q3 261 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 MVB12BQ9H7P6 319 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 SRA1Q9HD15 236 aaKnown RBP10.95□□□□□ -0.66
PTCH1-203ENST00000375274 EVA1BQ9NVM1 165 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 MRPL15Q9P015 296 aaKnown RBP10.95□□□□□ -0.66
PTCH1-203ENST00000375274 MGAT4AQ9UM21 535 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 TMEM14AQ9Y6G1 99 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 CSNK1G3Q9Y6M4 447 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 STRCQ7RTU9 1775 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 SEC14L2O76054 403 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 GNSP15586 552 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 EIF1AXP47813 144 aaKnown RBP10.95□□□□□ -0.66
PTCH1-203ENST00000375274 DAPP51397 102 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 GPM6BQ13491 265 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 AMZ1Q400G9 498 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 SLC29A4Q7RTT9 530 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 DNAJC22Q8N4W6 341 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 SAMD8Q96LT4 415 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 MTHFD2LQ9H903 347 aaPredicted RBP10.95□□□□□ -0.66
PTCH1-203ENST00000375274 PCDHGB2Q9Y5G2 931 aa10.95□□□□□ -0.66
PTCH1-203ENST00000375274 MYO5AQ9Y4I1 1855 aaKnown RBP10.95□□□□□ -0.66
PTCH1-203ENST00000375274 ANTXRLA6NF34 631 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 NPIPA5E9PKD4 350 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 SOX1O00570 391 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-203ENST00000375274 ZNF195O14628 629 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 AQP9O43315 295 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 APOC3P02656 99 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 DDCP20711 480 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 ARNTP27540 789 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 HBA1P69905 142 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 SIM1P81133 766 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-203ENST00000375274 CHAF1BQ13112 559 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 NNATQ16517 81 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 GATSQ8NAP1 163 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 CCDC120Q96HB5 630 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 SLC6A16Q9GZN6 736 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 TUBB1Q9H4B7 451 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 NPIPA1Q9UND3 350 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 TRAPPC13A5PLN9 417 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 F5H0A9 414 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-203ENST00000375274 OR7A17O14581 309 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 GABARAPO95166 117 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 LHCGRP22888 699 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 MLLT3P42568 568 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-203ENST00000375274 MAPK14Q16539 360 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 FAM86B1Q8N7N1 296 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 RIT1Q92963 219 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 SGTBQ96EQ0 304 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 TEX37Q96LM6 180 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 MROQ9BYG7 248 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 THSD1Q9NS62 852 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 A0A1W2PP55 124 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 IGLON5A6NGN9 336 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 EIF1AYO14602 144 aaKnown RBP10.94□□□□□ -0.66
PTCH1-203ENST00000375274 FRS3O43559 492 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 AK1P00568 194 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 UCHL1P09936 223 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 SYN1P17600 705 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 AOAHP28039 575 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 GPR143P51810 404 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 WDR5P61964 334 aaKnown RBP10.94□□□□□ -0.66
PTCH1-203ENST00000375274 ZNF91Q05481 1191 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 FPGSQ05932 587 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 MAP4K2Q12851 820 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 FAM76BQ5HYJ3 339 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 PLA2G15Q8NCC3 412 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 OR52E2Q8NGJ4 325 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 TRMT10AQ8TBZ6 339 aaKnown RBP10.94□□□□□ -0.66
PTCH1-203ENST00000375274 NXPE2Q96DL1 559 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 SLC41A3Q96GZ6 507 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 RBP7Q96R05 134 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 HMX3A6NHT5 357 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 A8MU76 341 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 S100A10P60903 97 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 RAB40BQ12829 278 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 NRARPQ7Z6K4 114 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 OR5AR1Q8NGP9 310 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 OR2L2Q8NH16 312 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 OR4K13Q8NH42 304 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 CNN2Q99439 309 aaKnown RBP10.94□□□□□ -0.66
PTCH1-203ENST00000375274 SDHAF3Q9NRP4 125 aa10.94□□□□□ -0.66
PTCH1-203ENST00000375274 RABL2AQ9UBK7 228 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-203ENST00000375274 RABL2BQ9UNT1 228 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms