RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 ACP1P24666 158 aa14.6□□□□□ -0.07
CCDC40-202ENST00000374876 NUDT6P53370 316 aa14.6□□□□□ -0.07
CCDC40-202ENST00000374876 LIM2P55344 173 aa14.6□□□□□ -0.07
CCDC40-202ENST00000374876 CDC42P60953 191 aa14.6□□□□□ -0.07
CCDC40-202ENST00000374876 MLC1Q15049 377 aa14.6□□□□□ -0.07
CCDC40-202ENST00000374876 TBCEQ15813 527 aaPredicted RBP14.6□□□□□ -0.07
CCDC40-202ENST00000374876 DGLUCYQ7Z3D6 616 aa14.6□□□□□ -0.07
CCDC40-202ENST00000374876 ADCK1Q86TW2 530 aa14.6□□□□□ -0.07
CCDC40-202ENST00000374876 C17orf82Q86X59 251 aaPredicted RBP14.6□□□□□ -0.07
CCDC40-202ENST00000374876 TMCO5AQ8N6Q1 288 aa14.6□□□□□ -0.07
CCDC40-202ENST00000374876 IFI44Q8TCB0 444 aa14.6□□□□□ -0.07
CCDC40-202ENST00000374876 APOBEC4Q8WW27 367 aaKnown RBP14.6□□□□□ -0.07
CCDC40-202ENST00000374876 RASSF5Q8WWW0 418 aa14.6□□□□□ -0.07
CCDC40-202ENST00000374876 GGHQ92820 318 aa14.6□□□□□ -0.07
CCDC40-202ENST00000374876 SH3YL1Q96HL8 342 aaPredicted RBP14.6□□□□□ -0.07
CCDC40-202ENST00000374876 NMNAT1Q9HAN9 279 aaPredicted RBP14.6□□□□□ -0.07
CCDC40-202ENST00000374876 HMG20AQ9NP66 347 aa14.6□□□□□ -0.07
CCDC40-202ENST00000374876 RHBDL2Q9NX52 303 aa14.6□□□□□ -0.07
CCDC40-202ENST00000374876 TAS2R7Q9NYW3 318 aa14.6□□□□□ -0.07
CCDC40-202ENST00000374876 SELENONQ9NZV5 590 aa14.6□□□□□ -0.07
CCDC40-202ENST00000374876 RNF215Q9Y6U7 377 aa14.6□□□□□ -0.07
CCDC40-202ENST00000374876 CLDN24A6NM45 220 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 CLDN25C9JDP6 229 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 FFAR1O14842 300 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 KCNJ13O60928 360 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 NADKO95544 446 aaPredicted RBP14.59□□□□□ -0.07
CCDC40-202ENST00000374876 SLC19A1P41440 591 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 DUSP3P51452 185 aaPredicted RBP14.59□□□□□ -0.07
CCDC40-202ENST00000374876 NCS1P62166 190 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 ZNF846Q147U1 533 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 PTGES3Q15185 160 aaKnown RBP14.59□□□□□ -0.07
CCDC40-202ENST00000374876 ZNF761Q86XN6 746 aaPredicted RBP14.59□□□□□ -0.07
CCDC40-202ENST00000374876 FAM20CQ8IXL6 584 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 Q8N9G6 341 aaPredicted RBP14.59□□□□□ -0.07
CCDC40-202ENST00000374876 GPR32P1Q8NGA4 272 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 OR52E1Q8NGJ3 308 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 PSMA8Q8TAA3 256 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 UCN3Q969E3 161 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 SLC35G5Q96KT7 338 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 MVB12BQ9H7P6 319 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 FKBP14Q9NWM8 211 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 GPR83Q9NYM4 423 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 EHD3Q9NZN3 535 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 ZNF624Q9P2J8 865 aaPredicted RBP14.59□□□□□ -0.07
CCDC40-202ENST00000374876 P2RX2Q9UBL9 471 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 SEC14L3Q9UDX4 400 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 SERPINB7O75635 380 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 STATHP02808 62 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 GABRB1P18505 474 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 NTSP30990 170 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 TGFBR2P37173 567 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 BCL6P41182 706 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 CLDN6P56747 220 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 RAB15P59190 212 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 SLC9A5Q14940 896 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 KLHL17Q6TDP4 642 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 ZNF793Q6ZN11 406 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 LINC00299Q6ZSB3 139 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 STX19Q8N4C7 294 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 SLC38A4Q969I6 547 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 CCDC74AQ96AQ1 378 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 LGALS12Q96DT0 336 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 VMP1Q96GC9 406 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 AMDHD1Q96NU7 426 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 COL21A1Q96P44 957 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 BBS4Q96RK4 519 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 GLIPR2Q9H4G4 154 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 KLHL31Q9H511 634 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 SLC35C2Q9NQQ7 365 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 FAIMQ9NVQ4 179 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 TRPC4Q9UBN4 977 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 B3GNT3Q9Y2A9 372 aa14.59□□□□□ -0.07
CCDC40-202ENST00000374876 TRBV4-1A0A0J9YWV2 114 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 ERI3O43414 337 aaKnown RBP14.58□□□□□ -0.08
CCDC40-202ENST00000374876 OR12D1P0DN82 309 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 GLB1P16278 677 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 POU1F1P28069 291 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 KCNJ5P48544 419 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 NCBP2P52298 156 aaKnown RBP eCLIP14.58□□□□□ -0.08
CCDC40-202ENST00000374876 CRISP1P54107 249 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 MAPK11Q15759 364 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 SYT16Q17RD7 645 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 TIGD6Q17RP2 521 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 ZNF770Q6IQ21 691 aaPredicted RBP14.58□□□□□ -0.08
CCDC40-202ENST00000374876 DHRS13Q6UX07 377 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 DEF8Q6ZN54 512 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 TBC1D19Q8N5T2 526 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 VANGL1Q8TAA9 524 aaPredicted RBP14.58□□□□□ -0.08
CCDC40-202ENST00000374876 DYNC2LI1Q8TCX1 351 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 XAGE5Q8WWM1 108 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 S100ZQ8WXG8 99 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 RPL3LQ92901 407 aaKnown RBP14.58□□□□□ -0.08
CCDC40-202ENST00000374876 ZNF354BQ96LW1 612 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 TREX2Q9BQ50 279 aaPredicted RBP14.58□□□□□ -0.08
CCDC40-202ENST00000374876 MACROD1Q9BQ69 325 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 WDR12Q9GZL7 423 aaKnown RBP14.58□□□□□ -0.08
CCDC40-202ENST00000374876 AICDAQ9GZX7 198 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 OR51I1Q9H343 314 aa14.58□□□□□ -0.08
CCDC40-202ENST00000374876 ZCCHC3Q9NUD5 404 aaKnown RBP14.58□□□□□ -0.08
CCDC40-202ENST00000374876 TBCCD1Q9NVR7 557 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms