RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 TDHQ8IZJ6 230 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 YIPF7Q8N8F6 280 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 OSTF1Q92882 214 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 ISG20Q96AZ6 181 aaKnown RBP12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 EBF1Q9UH73 591 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 SCN7AQ01118 1682 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 WASHC1A8K0Z3 465 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 RNF212BA8MTL3 300 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 WASH3PC4AMC7 463 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 ADAM12O43184 909 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 TOX4O94842 621 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 SCGB1D1O95968 90 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 MT-ND5P03915 603 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 NR2C1P13056 603 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 TNFRSF4P43489 277 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 SLC6A11P48066 632 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 ST3GAL4Q11206 333 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 WASH2PQ6VEQ5 465 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 OR4D6Q8NGJ1 314 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 RHEBL1Q8TAI7 183 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 MRPL38Q96DV4 380 aaKnown RBP12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 TAS2R10Q9NYW0 307 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 ACTL7AQ9Y615 435 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 LINC01553A4QN01 128 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 SOX14O95416 240 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 PAHP00439 452 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 PER3P56645 1201 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 POU6F2P78424 691 aaPredicted RBP12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 RFXAPO00287 272 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 ZNF208O43345 1280 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 ANGPTL7O43827 346 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 LAPTM4AQ15012 233 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 DNM1P34Q6PK57 102 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 PNLDC1Q8NA58 520 aaKnown RBP12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 MED30Q96HR3 178 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 RNF32Q9H0A6 362 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 ZBP1Q9H171 429 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 CSNK1G1Q9HCP0 422 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 FAIMQ9NVQ4 179 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 GIMAP2Q9UG22 337 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 NOP16Q9Y3C1 178 aaKnown RBP12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 NUMBLQ9Y6R0 609 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 RNH1P13489 461 aaKnown RBP12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 CD9P21926 228 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 CD6P30203 668 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 SOX9P48436 509 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 SLAMF1Q13291 335 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 GBX1Q14549 363 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 NXPE4Q6UWF7 544 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 TCEANCQ8N8B7 351 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 IFI44Q8TCB0 444 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 STK35Q8TDR2 534 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 DAZLQ92904 295 aaKnown RBP12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 PELOQ9BRX2 385 aaKnown RBP12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 PRDM9Q9NQV7 894 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 MARCH4Q9P2E8 410 aaPredicted RBP12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 MYH8P13535 1937 aa12.68□□□□□ -0.38
RAPGEF1-201ENST00000372189 TRAV6A0A075B6T7 132 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 FEZF1A0PJY2 475 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 PDYNP01213 254 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 GSTM2P28161 218 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 HOXC13P31276 330 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 MAP2K3P46734 347 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 RAB28P51157 221 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 MRPS21P82921 87 aaKnown RBP12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 DPPA4Q7L190 304 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 OR51I1Q9H343 314 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 EEDO75530 441 aaKnown RBP12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 CPEP16870 476 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 UQCRC2P22695 453 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 MYF6P23409 242 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 BMP8BP34820 402 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 LASP1Q14847 261 aaKnown RBP12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 DEFB134Q4QY38 66 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 BMP8AQ7Z5Y6 402 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 TCTE3Q8IZS6 198 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 ZNF561Q8N587 486 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 MINDY1Q8N5J2 469 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 OR7G1Q8NGA0 311 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 MFSD8Q8NHS3 518 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 CD180Q99467 661 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 TMEM246Q9BRR3 403 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 G6PC3Q9BUM1 346 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 ASH2LQ9UBL3 628 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 RALYQ9UKM9 306 aaKnown RBP12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 KCNS2Q9ULS6 477 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 CERS1P27544 350 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 PON3Q15166 354 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 TRAM1Q15629 374 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 TMEM41BQ5BJD5 291 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 C3orf38Q5JPI3 329 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 TP53INP2Q8IXH6 220 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 LGALS12Q96DT0 336 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 UNKLQ9H9P5 680 aaKnown RBP12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 NLGN3Q9NZ94 848 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 EXTL2Q9UBQ6 330 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 PCDHGB2Q9Y5G2 931 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 HSPE1-MOB4S4R3N1 261 aa12.67□□□□□ -0.38
RAPGEF1-201ENST00000372189 ALDOAP04075 364 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms