RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 GPX2P18283 190 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 FPR1P21462 350 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 FBLP22087 321 aaKnown RBP9.74□□□□□ -0.85
COL5A1-202ENST00000371820 MMP11P24347 488 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 DCTP40126 519 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 KIR3DL1P43629 444 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 ST13P50502 369 aaKnown RBP9.74□□□□□ -0.85
COL5A1-202ENST00000371820 DGKQP52824 942 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 ARF3P61204 181 aaPredicted RBP9.74□□□□□ -0.85
COL5A1-202ENST00000371820 ISL1P61371 349 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 RPS15AP62244 130 aaKnown RBP9.74□□□□□ -0.85
COL5A1-202ENST00000371820 TBPL1P62380 186 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.74□□□□□ -0.85
COL5A1-202ENST00000371820 NEDD8Q15843 81 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 NKG7Q16617 165 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 RGS21Q2M5E4 152 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 PRTGQ2VWP7 1150 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 DCAF10Q5QP82 559 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 GTF2IRD2BQ6EKJ0 949 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 OR2T5Q6IEZ7 315 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 ANKRD26P1Q6NSI1 321 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 NIPAL1Q6NVV3 410 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 FBXO42Q6P3S6 717 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 TUBA3EQ6PEY2 450 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 AGTRAPQ6RW13 159 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 EIF3MQ7L2H7 374 aaKnown RBP9.74□□□□□ -0.85
COL5A1-202ENST00000371820 R3HCC1LQ7Z5L2 792 aaKnown RBP9.74□□□□□ -0.85
COL5A1-202ENST00000371820 GTF2IRD2Q86UP8 949 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 C17orf64Q86WR6 236 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 ZDHHC21Q8IVQ6 265 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 KLHDC8AQ8IYD2 350 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 TBC1D19Q8N5T2 526 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 FDCSPQ8NFU4 85 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 OR8J2Q8NGG1 315 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 OR2T29Q8NH02 315 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 FBXO30Q8TB52 745 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 GIPC3Q8TF64 312 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 CHPT1Q8WUD6 406 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 TM9SF4Q92544 642 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 FBXL8Q96CD0 374 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 FCRL1Q96LA6 429 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 CDK15Q96Q40 435 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 PHF12Q96QT6 1004 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 CPPED1Q9BRF8 314 aaPredicted RBP9.74□□□□□ -0.85
COL5A1-202ENST00000371820 ATP13A2Q9NQ11 1180 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 ADPRHL2Q9NX46 363 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 P4HTMQ9NXG6 502 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 ZNF282Q9UDV7 671 aaPredicted RBP9.74□□□□□ -0.85
COL5A1-202ENST00000371820 WARS2Q9UGM6 360 aaKnown RBP9.74□□□□□ -0.85
COL5A1-202ENST00000371820 BTNL2Q9UIR0 455 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 SH3GLB1Q9Y371 365 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 PCDHB14Q9Y5E9 798 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 PCDHGB3Q9Y5G1 929 aa9.74□□□□□ -0.85
COL5A1-202ENST00000371820 TNRC6AQ8NDV7 1962 aaKnown RBP9.74□□□□□ -0.85
COL5A1-202ENST00000371820 CROCCQ5TZA2 2017 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 SNRNP200O75643 2136 aaKnown RBP9.73□□□□□ -0.85
COL5A1-202ENST00000371820 LOC105369274A0A096LPK9 316 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 LOC102723532A0A0G2JNH3 316 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 A0A1B0GTL3 188 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 BLACEA4D250 179 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 VSTM2BA6NLU5 285 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 M0R3G1 203 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 BCKDKO14874 412 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 JRKO75564 520 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 SERPINA1P01009 418 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 INHBBP09529 407 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 OCM2P0CE71 109 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 OCMP0CE72 109 aaPredicted RBP9.73□□□□□ -0.85
COL5A1-202ENST00000371820 ITGA2P17301 1181 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 OR1D4P47884 311 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 UQCRFS1P47985 274 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 ENTPD1P49961 510 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 HTR6P50406 440 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 GZMMP51124 257 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 RBBP4Q09028 425 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 AIMP2Q13155 320 aaKnown RBP9.73□□□□□ -0.85
COL5A1-202ENST00000371820 CDK5R2Q13319 367 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 FAM53BQ14153 422 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 ZIK1Q3SY52 487 aaPredicted RBP9.73□□□□□ -0.85
COL5A1-202ENST00000371820 SPANXN4Q5MJ08 99 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 FAM69BQ5VUD6 431 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 FRG2Q64ET8 278 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 CAPN13Q6MZZ7 669 aaPredicted RBP9.73□□□□□ -0.85
COL5A1-202ENST00000371820 TBPL2Q6SJ96 375 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 LCTLQ6UWM7 567 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 COX15Q7KZN9 410 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 PPP1R32Q7Z5V6 425 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 EGFL6Q8IUX8 553 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 LRRC56Q8IYG6 542 aaPredicted RBP9.73□□□□□ -0.85
COL5A1-202ENST00000371820 OFCC1Q8IZS5 231 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 OR4N4Q8N0Y3 316 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 CAMKVQ8NCB2 501 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 GALNT11Q8NCW6 608 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 CHDHQ8NE62 594 aaPredicted RBP9.73□□□□□ -0.85
COL5A1-202ENST00000371820 ABTB1Q969K4 478 aaPredicted RBP9.73□□□□□ -0.85
COL5A1-202ENST00000371820 MUL1Q969V5 352 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 ESAMQ96AP7 390 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 FRG2BQ96QU4 278 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 OR2A5Q96R48 311 aa9.73□□□□□ -0.85
COL5A1-202ENST00000371820 SPSB2Q99619 263 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms