RNA–Protein interactions for RNA: ENST00000371219.2

RBM38-204, Transcript of RNA binding motif protein 38, human

TSL 2 BASIC

Gene RBM38, Length 760 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM38-204	ENST00000371219	SLC39A7	Q92504	469 aa		13.63	□□□□□ -0.23
RBM38-204	ENST00000371219	SPDL1	Q96EA4	605 aa		13.63	□□□□□ -0.23
RBM38-204	ENST00000371219	GIMAP5	Q96F15	307 aa		13.63	□□□□□ -0.23
RBM38-204	ENST00000371219	ITCH	Q96J02	903 aa		13.63	□□□□□ -0.23
RBM38-204	ENST00000371219	STAC	Q99469	402 aa		13.63	□□□□□ -0.23
RBM38-204	ENST00000371219	EPN3	Q9H201	632 aa		13.63	□□□□□ -0.23
RBM38-204	ENST00000371219	CXorf36	Q9H7Y0	433 aa		13.63	□□□□□ -0.23
RBM38-204	ENST00000371219	ZBTB20	Q9HC78	741 aa	Predicted RBP	13.63	□□□□□ -0.23
RBM38-204	ENST00000371219	DUSP22	Q9NRW4	184 aa		13.63	□□□□□ -0.23
RBM38-204	ENST00000371219	ZCCHC3	Q9NUD5	404 aa	Known RBP	13.63	□□□□□ -0.23
RBM38-204	ENST00000371219	HPF1	Q9NWY4	346 aa		13.63	□□□□□ -0.23
RBM38-204	ENST00000371219	MRTO4	Q9UKD2	239 aa	Known RBP	13.63	□□□□□ -0.23
RBM38-204	ENST00000371219	DTX4	Q9Y2E6	619 aa		13.63	□□□□□ -0.23
RBM38-204	ENST00000371219	SNX8	Q9Y5X2	465 aa		13.63	□□□□□ -0.23
RBM38-204	ENST00000371219	CCDC154	A6NI56	674 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	MAN1A2	O60476	641 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	CCDC22	O60826	627 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	SLC25A12	O75746	678 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	CD46	P15529	392 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	UQCRC2	P22695	453 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	ABCD3	P28288	659 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	PTGER1	P34995	402 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	SEC24C	P53992	1094 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	GYS2	P54840	703 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	RPP38	P78345	283 aa	Known RBP	13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	MRPS22	P82650	360 aa	Known RBP	13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	MAPRE2	Q15555	327 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	OR1C1	Q15619	314 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	NTRK2	Q16620	822 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	SPDYE7P	Q495Y7	208 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	COQ5	Q5HYK3	327 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	SLC6A19	Q695T7	634 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	MFSD12	Q6NUT3	480 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	TMEM81	Q6P7N7	255 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	RTL4	Q6ZR62	310 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	FUNDC1	Q8IVP5	155 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	CLECL1	Q8IZS7	167 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	SLC34A3	Q8N130	599 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	TEX19	Q8NA77	164 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	TMEM178A	Q8NBL3	297 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	MIPOL1	Q8TD10	442 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	TMEM125	Q96AQ2	219 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	C5orf34	Q96MH7	638 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	PHF12	Q96QT6	1004 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	PANX1	Q96RD7	426 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	TRIM4	Q9C037	500 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	NXF5	Q9H1B4	397 aa	Known RBP	13.62	□□□□□ -0.23
RBM38-204	ENST00000371219		Q9N2J8	555 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	TIMMDC1	Q9NPL8	285 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	SERHL	Q9NQF3	203 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	ZNF71	Q9NQZ8	489 aa	Predicted RBP	13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	CCDC167	Q9P0B6	97 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	LRFN1	Q9P244	771 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	VPS4A	Q9UN37	437 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	PCDHGB3	Q9Y5G1	929 aa		13.62	□□□□□ -0.23
RBM38-204	ENST00000371219	RNF103-CHMP3	A0A140T963	221 aa		13.61	□□□□□ -0.23
RBM38-204	ENST00000371219		A0A1W2PP18	115 aa		13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	OR6C70	A6NIJ9	312 aa		13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	DUXA	A6NLW8	204 aa		13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	BBIP1	A8MTZ0	92 aa		13.61	□□□□□ -0.23
RBM38-204	ENST00000371219		K7EM74	188 aa		13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	RFXANK	O14593	260 aa		13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	TP53I11	O14683	189 aa		13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	ASNA1	O43681	348 aa		13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	NEURL1	O76050	574 aa		13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	NKX2-2	O95096	273 aa		13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	AGR2	O95994	175 aa		13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	LCN1	P31025	176 aa		13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	CD96	P40200	585 aa		13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	SOX3	P41225	446 aa		13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	CD97	P48960	835 aa		13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	ANXA11	P50995	505 aa	Known RBP	13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	NR0B1	P51843	470 aa	Known RBP	13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	DGKQ	P52824	942 aa		13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	PSMD4	P55036	377 aa	Known RBP	13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	PSG6	Q00889	435 aa		13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	OC90	Q02509	493 aa	Predicted RBP	13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	ZNF791	Q3KP31	576 aa	Predicted RBP	13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	AGK	Q53H12	422 aa		13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	TBCEL	Q5QJ74	424 aa		13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	CDC73	Q6P1J9	531 aa		13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	LYPD8	Q6UX82	237 aa		13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	SZRD1	Q7Z422	152 aa		13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	ANKRD46	Q86W74	232 aa		13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	SIMC1	Q8NDZ2	872 aa		13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	NEURL3	Q96EH8	262 aa		13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	SLC35A4	Q96G79	324 aa		13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	SCMH1	Q96GD3	660 aa		13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	ACTRT3	Q9BYD9	372 aa		13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	13.61	□□□□□ -0.23	8e-7	■■■■□ 24.3
RBM38-204	ENST00000371219	SH2D2A	Q9NP31	389 aa		13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	SAR1A	Q9NR31	198 aa		13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	GPATCH2	Q9NW75	528 aa		13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	ADAM21	Q9UKJ8	722 aa		13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	FAF1	Q9UNN5	650 aa	Predicted RBP	13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	ERVK-11	Q9UQG0	969 aa		13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	KLF13	Q9Y2Y9	288 aa	Predicted RBP	13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	NPFFR2	Q9Y5X5	522 aa		13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	GMEB1	Q9Y692	573 aa		13.61	□□□□□ -0.23
RBM38-204	ENST00000371219	RP1L1	Q8IWN7	2480 aa	Predicted RBP	13.61	□□□□□ -0.23

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