RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 SERPINB1P30740 379 aa3.34□□□□□ -1.87
MCF2-202ENST00000370573 NBL1P41271 181 aa3.34□□□□□ -1.87
MCF2-202ENST00000370573 CPA2P48052 419 aa3.34□□□□□ -1.87
MCF2-202ENST00000370573 RPS15AP62244 130 aaKnown RBP3.34□□□□□ -1.87
MCF2-202ENST00000370573 ACSM2AQ08AH3 577 aa3.34□□□□□ -1.87
MCF2-202ENST00000370573 CUL3Q13618 768 aa3.34□□□□□ -1.87
MCF2-202ENST00000370573 ICAM4Q14773 271 aa3.34□□□□□ -1.87
MCF2-202ENST00000370573 PTGR1Q14914 329 aa3.34□□□□□ -1.87
MCF2-202ENST00000370573 GSTA3Q16772 222 aa3.34□□□□□ -1.87
MCF2-202ENST00000370573 DEFB110Q30KQ9 67 aa3.34□□□□□ -1.87
MCF2-202ENST00000370573 PDCD4Q53EL6 469 aaKnown RBP3.34□□□□□ -1.87
MCF2-202ENST00000370573 TOR1AIP1Q5JTV8 583 aa3.34□□□□□ -1.87
MCF2-202ENST00000370573 ACSM2BQ68CK6 577 aa3.34□□□□□ -1.87
MCF2-202ENST00000370573 ZNF793Q6ZN11 406 aa3.34□□□□□ -1.87
MCF2-202ENST00000370573 COMMD6Q7Z4G1 85 aa3.34□□□□□ -1.87
MCF2-202ENST00000370573 LIX1Q8N485 282 aa3.34□□□□□ -1.87
MCF2-202ENST00000370573 NT5CQ8TCD5 201 aa3.34□□□□□ -1.87
MCF2-202ENST00000370573 PROKR1Q8TCW9 393 aa3.34□□□□□ -1.87
MCF2-202ENST00000370573 IPCEF1Q8WWN9 437 aaPredicted RBP3.34□□□□□ -1.87
MCF2-202ENST00000370573 SLC13A3Q8WWT9 602 aa3.34□□□□□ -1.87
MCF2-202ENST00000370573 SDCCAG3Q96C92 435 aa3.34□□□□□ -1.87
MCF2-202ENST00000370573 MS4A6EQ96DS6 147 aa3.34□□□□□ -1.87
MCF2-202ENST00000370573 ZDHHC12Q96GR4 267 aa3.34□□□□□ -1.87
MCF2-202ENST00000370573 SMIM10Q96HG1 83 aa3.34□□□□□ -1.87
MCF2-202ENST00000370573 TEFMQ96QE5 360 aaKnown RBP3.34□□□□□ -1.87
MCF2-202ENST00000370573 SH3GL3Q99963 347 aa3.34□□□□□ -1.87
MCF2-202ENST00000370573 CCDC3Q9BQI4 270 aa3.34□□□□□ -1.87
MCF2-202ENST00000370573 STARD5Q9NSY2 213 aa3.34□□□□□ -1.87
MCF2-202ENST00000370573 SEMA4GQ9NTN9 838 aa3.34□□□□□ -1.87
MCF2-202ENST00000370573 SEMA5BQ9P283 1151 aa3.34□□□□□ -1.87
MCF2-202ENST00000370573 EXO1Q9UQ84 846 aaKnown RBP3.34□□□□□ -1.87
MCF2-202ENST00000370573 EIF3LQ9Y262 564 aaKnown RBP3.34□□□□□ -1.87
MCF2-202ENST00000370573 MN1Q10571 1320 aaPredicted RBP3.34□□□□□ -1.87
MCF2-202ENST00000370573 RIF1Q5UIP0 2472 aaKnown RBP3.34□□□□□ -1.87
MCF2-202ENST00000370573 SCN3AQ9NY46 2000 aa3.34□□□□□ -1.87
MCF2-202ENST00000370573 ASPDHA6ND91 283 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 TLCD2A6NGC4 264 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 C4orf47A7E2U8 309 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 A8MU76 341 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 ANKRD65E5RJM6 399 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 E9PLN8 166 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 J3KTA2 159 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 M0QYG6 137 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 FBP2O00757 339 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 AP3D1O14617 1153 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 SLC22A2O15244 555 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 NDUFS4O43181 175 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 DUX1O43812 170 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 TMPRSS11DO60235 418 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 CBFA2T3O75081 653 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 SLC22A3O75751 556 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 SEMA3DO95025 777 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 LDOC1O95751 146 aaPredicted RBP3.34□□□□□ -1.88
MCF2-202ENST00000370573 RPLP0P05388 317 aaKnown RBP3.34□□□□□ -1.88
MCF2-202ENST00000370573 KLK1P06870 262 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 ANXA4P09525 319 aaPredicted RBP3.34□□□□□ -1.88
MCF2-202ENST00000370573 PIM1P11309 404 aaPredicted RBP3.34□□□□□ -1.88
MCF2-202ENST00000370573 CHMP24386 653 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 TIA1P31483 386 aaKnown RBP eCLIP3.34□□□□□ -1.88
MCF2-202ENST00000370573 PTDSS1P48651 473 aaKnown RBP3.34□□□□□ -1.88
MCF2-202ENST00000370573 ACADVLP49748 655 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 DGKQP52824 942 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 PLA2G16P53816 162 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 ATXN3P54252 364 aaPredicted RBP3.34□□□□□ -1.88
MCF2-202ENST00000370573 POLE2P56282 527 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 CLDN8P56748 225 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 VSX2P58304 361 aaPredicted RBP3.34□□□□□ -1.88
MCF2-202ENST00000370573 RAB8AP61006 207 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 NCALDP61601 193 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 POU6F2P78424 691 aaPredicted RBP3.34□□□□□ -1.88
MCF2-202ENST00000370573 ARF1P84077 181 aaKnown RBP3.34□□□□□ -1.88
MCF2-202ENST00000370573 FHL3Q13643 280 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 HERC3Q15034 1050 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 RPS6KA2Q15349 733 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 CSRP2Q16527 193 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 HKDC1Q2TB90 917 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 VPS26BQ4G0F5 336 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 TMEM35AQ53FP2 167 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 CCDC92Q53HC0 331 aaPredicted RBP3.34□□□□□ -1.88
MCF2-202ENST00000370573 CACHD1Q5VU97 1274 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 OR4C11Q6IEV9 310 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 WDR74Q6RFH5 385 aaPredicted RBP3.34□□□□□ -1.88
MCF2-202ENST00000370573 CCDC121Q6ZUS5 278 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 YTHDF3Q7Z739 585 aaKnown RBP3.34□□□□□ -1.88
MCF2-202ENST00000370573 PXKQ7Z7A4 578 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 ASPGQ86U10 573 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 RIMKLAQ8IXN7 391 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 MMP21Q8N119 569 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 TRPV3Q8NET8 790 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 TTLQ8NG68 377 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 OR6C4Q8NGE1 309 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 UTP15Q8TED0 518 aaKnown RBP3.34□□□□□ -1.88
MCF2-202ENST00000370573 C16orf78Q8WTQ4 265 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 UCN3Q969E3 161 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 TM4SF18Q96CE8 201 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 SLC7A6OSQ96CW6 309 aaPredicted RBP3.34□□□□□ -1.88
MCF2-202ENST00000370573 METTL2AQ96IZ6 378 aaKnown RBP3.34□□□□□ -1.88
MCF2-202ENST00000370573 CNDP2Q96KP4 475 aaKnown RBP3.34□□□□□ -1.88
MCF2-202ENST00000370573 ZNF285Q96NJ3 590 aa3.34□□□□□ -1.88
MCF2-202ENST00000370573 QRFPRQ96P65 431 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms