RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 TIFABQ6ZNK6 161 aa8.12□□□□□ -1.11
ABCA4-201ENST00000370225 FTMTQ8N4E7 242 aa8.12□□□□□ -1.11
ABCA4-201ENST00000370225 OR5T1Q8NG75 326 aa8.12□□□□□ -1.11
ABCA4-201ENST00000370225 OR5D16Q8NGK9 328 aa8.12□□□□□ -1.11
ABCA4-201ENST00000370225 NR4A3Q92570 626 aa8.12□□□□□ -1.11
ABCA4-201ENST00000370225 FBXL8Q96CD0 374 aa8.12□□□□□ -1.11
ABCA4-201ENST00000370225 LMF1Q96S06 567 aa8.12□□□□□ -1.11
ABCA4-201ENST00000370225 TMEM184CQ9NVA4 438 aa8.12□□□□□ -1.11
ABCA4-201ENST00000370225 A0A1B0GVC2 190 aa8.12□□□□□ -1.11
ABCA4-201ENST00000370225 ALDOAP04075 364 aaKnown RBP8.12□□□□□ -1.11
ABCA4-201ENST00000370225 S100A2P29034 98 aa8.12□□□□□ -1.11
ABCA4-201ENST00000370225 UNQ6126/PRO20091Q6UXV3 157 aa8.12□□□□□ -1.11
ABCA4-201ENST00000370225 ERMP1Q7Z2K6 904 aa8.12□□□□□ -1.11
ABCA4-201ENST00000370225 LMNTD1Q8N9Z9 388 aa8.12□□□□□ -1.11
ABCA4-201ENST00000370225 MFSD8Q8NHS3 518 aa8.12□□□□□ -1.11
ABCA4-201ENST00000370225 SLC41A3Q96GZ6 507 aa8.12□□□□□ -1.11
ABCA4-201ENST00000370225 CNN2Q99439 309 aaKnown RBP8.12□□□□□ -1.11
ABCA4-201ENST00000370225 PELOQ9BRX2 385 aaKnown RBP8.12□□□□□ -1.11
ABCA4-201ENST00000370225 ZDHHC7Q9NXF8 308 aa8.12□□□□□ -1.11
ABCA4-201ENST00000370225 EXTL2Q9UBQ6 330 aa8.12□□□□□ -1.11
ABCA4-201ENST00000370225 RGPD5Q99666 1765 aa8.12□□□□□ -1.11
ABCA4-201ENST00000370225 RFPL1O75677 317 aa8.12□□□□□ -1.11
ABCA4-201ENST00000370225 PPM1BO75688 479 aa8.12□□□□□ -1.11
ABCA4-201ENST00000370225 SNAP29O95721 258 aa8.12□□□□□ -1.11
ABCA4-201ENST00000370225 TMEM225BP0DP42 221 aa8.12□□□□□ -1.11
ABCA4-201ENST00000370225 EPHA1P21709 976 aa8.12□□□□□ -1.11
ABCA4-201ENST00000370225 CD40LGP29965 261 aa8.12□□□□□ -1.11
ABCA4-201ENST00000370225 FBXO43Q4G163 708 aa8.12□□□□□ -1.11
ABCA4-201ENST00000370225 COMMD6Q7Z4G1 85 aa8.12□□□□□ -1.11
ABCA4-201ENST00000370225 PSD4Q8NDX1 1056 aa8.12□□□□□ -1.11
ABCA4-201ENST00000370225 OR52E1Q8NGJ3 308 aa8.12□□□□□ -1.11
ABCA4-201ENST00000370225 NANOS1Q8WY41 292 aaKnown RBP8.12□□□□□ -1.11
ABCA4-201ENST00000370225 AKAP1Q92667 903 aaKnown RBP eCLIP8.12□□□□□ -1.11
ABCA4-201ENST00000370225 SERINC2Q96SA4 455 aa8.12□□□□□ -1.11
ABCA4-201ENST00000370225 ACTR6Q9GZN1 396 aa8.12□□□□□ -1.11
ABCA4-201ENST00000370225 GPRC5BQ9NZH0 403 aa8.12□□□□□ -1.11
ABCA4-201ENST00000370225 ERVK-19Q9WJR5 959 aa8.12□□□□□ -1.11
ABCA4-201ENST00000370225 ZNF175Q9Y473 711 aa8.12□□□□□ -1.11
ABCA4-201ENST00000370225 NUMA1Q14980 2115 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 A0A0J9YY10 115 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 FBP2O00757 339 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 NPC1O15118 1278 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 HTR3BO95264 441 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 HOXB9P17482 250 aaPredicted RBP8.11□□□□□ -1.11
ABCA4-201ENST00000370225 GCH1P30793 250 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 THBS2P35442 1172 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 LSSP48449 732 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 CLCA4Q14CN2 919 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 PTCRAQ6ISU1 281 aaPredicted RBP8.11□□□□□ -1.11
ABCA4-201ENST00000370225 ACVR1CQ8NER5 493 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 LRRC20Q8TCA0 184 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 ZNF775Q96BV0 537 aaPredicted RBP8.11□□□□□ -1.11
ABCA4-201ENST00000370225 FAM71F1Q96KD3 344 aaPredicted RBP8.11□□□□□ -1.11
ABCA4-201ENST00000370225 SLC46A2Q9BY10 475 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 TMEM168Q9H0V1 697 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 SLC6A17Q9H1V8 727 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 RDH14Q9HBH5 336 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 SLAMF7Q9NQ25 335 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 ACTL6BO94805 426 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 C8BP07358 591 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 DRD2P14416 443 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 RAC2P15153 192 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 PSMB5P28074 263 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 FRKP42685 505 aaPredicted RBP8.11□□□□□ -1.11
ABCA4-201ENST00000370225 XCR1P46094 333 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 SCAPQ12770 1279 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 EIF2B1Q14232 305 aaKnown RBP8.11□□□□□ -1.11
ABCA4-201ENST00000370225 FAM217AQ8IXS0 508 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 ECHDC3Q96DC8 303 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 TMEM19Q96HH6 336 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 ZNF334Q9HCZ1 680 aaPredicted RBP8.11□□□□□ -1.11
ABCA4-201ENST00000370225 KCNIP1Q9NZI2 227 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 USP36Q9P275 1121 aaKnown RBP8.11□□□□□ -1.11
ABCA4-201ENST00000370225 MLXQ9UH92 298 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 LRRN3E7EW58 273 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 CSNK1EP49674 416 aaKnown RBP8.11□□□□□ -1.11
ABCA4-201ENST00000370225 CDK3Q00526 305 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 ZP2Q05996 745 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 EXOSC7Q15024 291 aaKnown RBP8.11□□□□□ -1.11
ABCA4-201ENST00000370225 SFT2D3Q587I9 215 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 FAM78AQ5JUQ0 283 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 KANK2Q63ZY3 851 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 ZNF517Q6ZMY9 492 aaPredicted RBP8.11□□□□□ -1.11
ABCA4-201ENST00000370225 MAMDC2Q7Z304 686 aaPredicted RBP8.11□□□□□ -1.11
ABCA4-201ENST00000370225 DPH1Q9BZG8 443 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 LRRN3Q9H3W5 708 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 RETREG1Q9H6L5 497 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 TMEM165Q9HC07 324 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 KLHL21Q9UJP4 597 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 WDPCPO95876 746 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 FDXRP22570 491 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 FXYD4P59646 89 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 MAT1AQ00266 395 aaKnown RBP8.11□□□□□ -1.11
ABCA4-201ENST00000370225 SLC18B1Q6NT16 456 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 UNC5DQ6UXZ4 953 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 NRMQ8IXM6 262 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 CTRCQ99895 268 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 SLC30A2Q9BRI3 323 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 ACTRT3Q9BYD9 372 aa8.11□□□□□ -1.11
ABCA4-201ENST00000370225 ZNF576Q9H609 170 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms