RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 TRNT1Q96Q11 434 aaKnown RBP22.25■■□□□ 1.15
SNX3-203ENST00000368979 CNPPD1Q9BV87 410 aa22.25■■□□□ 1.15
SNX3-203ENST00000368979 SLC26A1Q9H2B4 701 aa22.25■■□□□ 1.15
SNX3-203ENST00000368979 DUSP22Q9NRW4 184 aa22.25■■□□□ 1.15
SNX3-203ENST00000368979 ERVK-19Q9WJR5 959 aa22.25■■□□□ 1.15
SNX3-203ENST00000368979 GPC6Q9Y625 555 aaPredicted RBP22.25■■□□□ 1.15
SNX3-203ENST00000368979 FAM149AA5PLN7 773 aa22.24■■□□□ 1.15
SNX3-203ENST00000368979 CSO75390 466 aaKnown RBP22.24■■□□□ 1.15
SNX3-203ENST00000368979 MT-CO3P00414 261 aa22.24■■□□□ 1.15
SNX3-203ENST00000368979 CLPSP04118 112 aa22.24■■□□□ 1.15
SNX3-203ENST00000368979 ALOX5P09917 674 aa22.24■■□□□ 1.15
SNX3-203ENST00000368979 TNNI3P19429 210 aa22.24■■□□□ 1.15
SNX3-203ENST00000368979 ETV5P41161 510 aa22.24■■□□□ 1.15
SNX3-203ENST00000368979 RAB15P59190 212 aa22.24■■□□□ 1.15
SNX3-203ENST00000368979 ELAVL1Q15717 326 aaKnown RBP22.24■■□□□ 1.15
SNX3-203ENST00000368979 GPAT3Q53EU6 434 aa22.24■■□□□ 1.15
SNX3-203ENST00000368979 LCN10Q6JVE6 187 aa22.24■■□□□ 1.15
SNX3-203ENST00000368979 CENPNQ96H22 339 aaPredicted RBP22.24■■□□□ 1.15
SNX3-203ENST00000368979 TPD52L3Q96J77 140 aa22.24■■□□□ 1.15
SNX3-203ENST00000368979 TACO1Q9BSH4 297 aaKnown RBP22.24■■□□□ 1.15
SNX3-203ENST00000368979 LMF2Q9BU23 707 aaKnown RBP22.24■■□□□ 1.15
SNX3-203ENST00000368979 BTBD2Q9BX70 525 aa22.24■■□□□ 1.15
SNX3-203ENST00000368979 FOLH1BQ9HBA9 442 aa22.24■■□□□ 1.15
SNX3-203ENST00000368979 IL1RAPQ9NPH3 570 aa22.24■■□□□ 1.15
SNX3-203ENST00000368979 PNO1Q9NRX1 252 aaKnown RBP22.24■■□□□ 1.15
SNX3-203ENST00000368979 CALML5Q9NZT1 146 aa22.24■■□□□ 1.15
SNX3-203ENST00000368979 IFT80Q9P2H3 777 aaPredicted RBP22.24■■□□□ 1.15
SNX3-203ENST00000368979 PCDHGA8Q9Y5G5 932 aa22.24■■□□□ 1.15
SNX3-203ENST00000368979 DSPPQ9NZW4 1301 aa22.24■■□□□ 1.15
SNX3-203ENST00000368979 A0A0G2JPF8 293 aa22.23■■□□□ 1.15
SNX3-203ENST00000368979 A8MVJ9 347 aa22.23■■□□□ 1.15
SNX3-203ENST00000368979 HNRNPCL2B2RXH8 293 aa22.23■■□□□ 1.15
SNX3-203ENST00000368979 HNRNPCL3B7ZW38 293 aa22.23■■□□□ 1.15
SNX3-203ENST00000368979 PRAMEF2O60811 474 aa22.23■■□□□ 1.15
SNX3-203ENST00000368979 MFN2O95140 757 aa22.23■■□□□ 1.15
SNX3-203ENST00000368979 H6PDO95479 791 aa22.23■■□□□ 1.15
SNX3-203ENST00000368979 LDLRP01130 860 aa22.23■■□□□ 1.15
SNX3-203ENST00000368979 ALBP02768 609 aa22.23■■□□□ 1.15
SNX3-203ENST00000368979 HNRNPCL4P0DMR1 293 aa22.23■■□□□ 1.15
SNX3-203ENST00000368979 ETS2P15036 469 aa22.23■■□□□ 1.15
SNX3-203ENST00000368979 AGXTP21549 392 aa22.23■■□□□ 1.15
SNX3-203ENST00000368979 PGDP52209 483 aa22.23■■□□□ 1.15
SNX3-203ENST00000368979 ZNF155Q12901 538 aaPredicted RBP22.23■■□□□ 1.15
SNX3-203ENST00000368979 NSDHLQ15738 373 aa22.23■■□□□ 1.15
SNX3-203ENST00000368979 ARHGAP11BQ3KRB8 267 aa22.23■■□□□ 1.15
SNX3-203ENST00000368979 FKBP9P1Q75LS8 142 aa22.23■■□□□ 1.15
SNX3-203ENST00000368979 RAB11FIP2Q7L804 512 aa22.23■■□□□ 1.15
SNX3-203ENST00000368979 OLIG3Q7RTU3 272 aa22.23■■□□□ 1.15
SNX3-203ENST00000368979 C16orf62Q7Z3J2 963 aa22.23■■□□□ 1.15
SNX3-203ENST00000368979 TMEM151BQ8IW70 566 aa22.23■■□□□ 1.15
SNX3-203ENST00000368979 ZNF615Q8N8J6 731 aa22.23■■□□□ 1.15
SNX3-203ENST00000368979 CHDHQ8NE62 594 aaPredicted RBP22.23■■□□□ 1.15
SNX3-203ENST00000368979 LZICQ8WZA0 190 aa22.23■■□□□ 1.15
SNX3-203ENST00000368979 ZNF607Q96SK3 696 aa22.23■■□□□ 1.15
SNX3-203ENST00000368979 SLC38A1Q9H2H9 487 aa22.23■■□□□ 1.15
SNX3-203ENST00000368979 SATB2Q9UPW6 733 aa22.23■■□□□ 1.15
SNX3-203ENST00000368979 HEMK1Q9Y5R4 338 aaPredicted RBP22.23■■□□□ 1.15
SNX3-203ENST00000368979 CLOCKO15516 846 aa22.22■■□□□ 1.15
SNX3-203ENST00000368979 PEX1O43933 1283 aa22.22■■□□□ 1.15
SNX3-203ENST00000368979 CNOT3O75175 753 aaKnown RBP22.22■■□□□ 1.15
SNX3-203ENST00000368979 PRSS23O95084 383 aa22.22■■□□□ 1.15
SNX3-203ENST00000368979 NKX2-2O95096 273 aa22.22■■□□□ 1.15
SNX3-203ENST00000368979 CD247P20963 164 aa22.22■■□□□ 1.15
SNX3-203ENST00000368979 LRRC36Q1X8D7 754 aa22.22■■□□□ 1.15
SNX3-203ENST00000368979 MRPL14Q6P1L8 145 aaKnown RBP22.22■■□□□ 1.15
SNX3-203ENST00000368979 DHRS13Q6UX07 377 aa22.22■■□□□ 1.15
SNX3-203ENST00000368979 ARMC8Q8IUR7 673 aa22.22■■□□□ 1.15
SNX3-203ENST00000368979 ZDHHC21Q8IVQ6 265 aa22.22■■□□□ 1.15
SNX3-203ENST00000368979 OR7G1Q8NGA0 311 aa22.22■■□□□ 1.15
SNX3-203ENST00000368979 FBXL20Q96IG2 436 aa22.22■■□□□ 1.15
SNX3-203ENST00000368979 VSTM2LQ96N03 204 aa22.22■■□□□ 1.15
SNX3-203ENST00000368979 ULBP3Q9BZM4 244 aa22.22■■□□□ 1.15
SNX3-203ENST00000368979 KLHL4Q9C0H6 718 aa22.22■■□□□ 1.15
SNX3-203ENST00000368979 OR10A5Q9H207 317 aa22.22■■□□□ 1.15
SNX3-203ENST00000368979 VCX3BQ9H321 246 aa22.22■■□□□ 1.15
SNX3-203ENST00000368979 DEAF1O75398 565 aaPredicted RBP22.21■■□□□ 1.15
SNX3-203ENST00000368979 FABP3P05413 133 aa22.21■■□□□ 1.15
SNX3-203ENST00000368979 CDK4P11802 303 aa22.21■■□□□ 1.15
SNX3-203ENST00000368979 FOXL2P58012 376 aa22.21■■□□□ 1.15
SNX3-203ENST00000368979 IFI44LQ53G44 452 aa22.21■■□□□ 1.15
SNX3-203ENST00000368979 DCAF12Q5T6F0 453 aa22.21■■□□□ 1.15
SNX3-203ENST00000368979 MLIPQ5VWP3 458 aa22.21■■□□□ 1.15
SNX3-203ENST00000368979 SHISA6Q6ZSJ9 500 aa22.21■■□□□ 1.15
SNX3-203ENST00000368979 KRT73Q86Y46 540 aa22.21■■□□□ 1.15
SNX3-203ENST00000368979 KBTBD2Q8IY47 623 aa22.21■■□□□ 1.15
SNX3-203ENST00000368979 SMYD1Q8NB12 490 aa22.21■■□□□ 1.15
SNX3-203ENST00000368979 C7orf34Q96L11 122 aa22.21■■□□□ 1.15
SNX3-203ENST00000368979 COL21A1Q96P44 957 aa22.21■■□□□ 1.15
SNX3-203ENST00000368979 DEPDC7Q96QD5 511 aa22.21■■□□□ 1.15
SNX3-203ENST00000368979 SPSB2Q99619 263 aa22.21■■□□□ 1.15
SNX3-203ENST00000368979 RSPO3Q9BXY4 272 aaPredicted RBP22.21■■□□□ 1.15
SNX3-203ENST00000368979 SOX17Q9H6I2 414 aaPredicted RBP22.21■■□□□ 1.15
SNX3-203ENST00000368979 AKIRIN1Q9H9L7 192 aaPredicted RBP22.21■■□□□ 1.15
SNX3-203ENST00000368979 PCDHGB3Q9Y5G1 929 aa22.21■■□□□ 1.15
SNX3-203ENST00000368979 B3GALT1Q9Y5Z6 326 aa22.21■■□□□ 1.15
SNX3-203ENST00000368979 A8MUA0 341 aa22.21■■□□□ 1.15
SNX3-203ENST00000368979 PROB1E7EW31 1015 aa22.21■■□□□ 1.15
SNX3-203ENST00000368979 DYRK3O43781 588 aa22.21■■□□□ 1.15
SNX3-203ENST00000368979 SERPINB7O75635 380 aa22.21■■□□□ 1.15
SNX3-203ENST00000368979 DKK1O94907 266 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms