RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 TMEM44Q2T9K0 475 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 PXDC1Q5TGL8 231 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 PODNL1Q6PEZ8 512 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 DEF8Q6ZN54 512 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 POGLUT1Q8NBL1 392 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 OR5M3Q8NGP4 307 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 TMEM19Q96HH6 336 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 ZNF607Q96SK3 696 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 TMEM121BQ9BXQ6 578 aaPredicted RBP16.43■□□□□ 0.22
CHTOP-203ENST00000368690 CLEC4MQ9H2X3 399 aaPredicted RBP16.43■□□□□ 0.22
CHTOP-203ENST00000368690 DMRT3Q9NQL9 472 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 SLCO1C1Q9NYB5 712 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 TRPM5Q9NZQ8 1165 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 UBQLN2Q9UHD9 624 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 A4GNTQ9UNA3 340 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 NUBP2Q9Y5Y2 271 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 KIF26AQ9ULI4 1882 aaPredicted RBP16.43■□□□□ 0.22
CHTOP-203ENST00000368690 FAM170BA6NMN3 283 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 TSPAN9O75954 239 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 ABLIM3O94929 683 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 BCHEP06276 602 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 MMP11P24347 488 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 IMPA1P29218 277 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 BMP8BP34820 402 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 ETV3P41162 512 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 SPINT3P49223 89 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 RAG2P55895 527 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 TAS2R50P59544 299 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 CYP4F8P98187 520 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 RPS26P11Q5JNZ5 115 aaPredicted RBP16.43■□□□□ 0.22
CHTOP-203ENST00000368690 TPGS2Q68CL5 300 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 BMP8AQ7Z5Y6 402 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 HORMAD2Q8N7B1 307 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 THAP7Q9BT49 309 aaPredicted RBP16.43■□□□□ 0.22
CHTOP-203ENST00000368690 ZSCAN5AQ9BUG6 496 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 EFCAB11Q9BUY7 163 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 CXorf36Q9H7Y0 433 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 C12orf4Q9NQ89 552 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 TNFRSF10DQ9UBN6 386 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 EXTL2Q9UBQ6 330 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 CLCA2Q9UQC9 943 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 YIPF1Q9Y548 306 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 NINQ8N4C6 2090 aa16.43■□□□□ 0.22
CHTOP-203ENST00000368690 CHD7Q9P2D1 2997 aa16.42■□□□□ 0.22
CHTOP-203ENST00000368690 DOCK6Q96HP0 2047 aa16.42■□□□□ 0.22
CHTOP-203ENST00000368690 ZNF821O75541 412 aaPredicted RBP16.42■□□□□ 0.22
CHTOP-203ENST00000368690 SCO1O75880 301 aa16.42■□□□□ 0.22
CHTOP-203ENST00000368690 RB1P06400 928 aa16.42■□□□□ 0.22
CHTOP-203ENST00000368690 ZNF250P15622 560 aa16.42■□□□□ 0.22
CHTOP-203ENST00000368690 ELK1P19419 428 aa16.42■□□□□ 0.22
CHTOP-203ENST00000368690 RBMS1P29558 406 aaKnown RBP16.42■□□□□ 0.22
CHTOP-203ENST00000368690 BTCP35070 178 aa16.42■□□□□ 0.22
CHTOP-203ENST00000368690 SLC1A3P43003 542 aa16.42■□□□□ 0.22
CHTOP-203ENST00000368690 MTNR1BP49286 362 aa16.42■□□□□ 0.22
CHTOP-203ENST00000368690 CLCNKAP51800 687 aa16.42■□□□□ 0.22
CHTOP-203ENST00000368690 LRRC32Q14392 662 aa16.42■□□□□ 0.22
CHTOP-203ENST00000368690 PRSS53Q2L4Q9 553 aa16.42■□□□□ 0.22
CHTOP-203ENST00000368690 BCL2L15Q5TBC7 163 aa16.42■□□□□ 0.22
CHTOP-203ENST00000368690 RAET1GQ6H3X3 334 aa16.42■□□□□ 0.22
CHTOP-203ENST00000368690 BRAT1Q6PJG6 821 aa16.42■□□□□ 0.22
CHTOP-203ENST00000368690 ZER1Q7Z7L7 766 aa16.42■□□□□ 0.22
CHTOP-203ENST00000368690 GPAT4Q86UL3 456 aa16.42■□□□□ 0.22
CHTOP-203ENST00000368690 CDH24Q86UP0 819 aa16.42■□□□□ 0.22
CHTOP-203ENST00000368690 TIGD4Q8IY51 512 aa16.42■□□□□ 0.22
CHTOP-203ENST00000368690 APCDD1Q8J025 514 aa16.42■□□□□ 0.22
CHTOP-203ENST00000368690 OR2AP1Q8NGE2 309 aa16.42■□□□□ 0.22
CHTOP-203ENST00000368690 OR52N1Q8NH53 320 aa16.42■□□□□ 0.22
CHTOP-203ENST00000368690 WFDC5Q8TCV5 224 aa16.42■□□□□ 0.22
CHTOP-203ENST00000368690 NEIL2Q969S2 332 aa16.42■□□□□ 0.22
CHTOP-203ENST00000368690 ZNF578Q96N58 590 aaPredicted RBP16.42■□□□□ 0.22
CHTOP-203ENST00000368690 RSPO3Q9BXY4 272 aaPredicted RBP16.42■□□□□ 0.22
CHTOP-203ENST00000368690 ZBP1Q9H171 429 aa16.42■□□□□ 0.22
CHTOP-203ENST00000368690 COPZ2Q9P299 210 aa16.42■□□□□ 0.22
CHTOP-203ENST00000368690 CACNG2Q9Y698 323 aa16.42■□□□□ 0.22
CHTOP-203ENST00000368690 CEP290O15078 2479 aa16.42■□□□□ 0.22
CHTOP-203ENST00000368690 CXorf51AA0A1B0GTR3 108 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 CASC3O15234 703 aaKnown RBP16.41■□□□□ 0.22
CHTOP-203ENST00000368690 HRO43593 1189 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 NFATC1O95644 943 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 CXCL14O95715 111 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 LINC00271P0C7V0 271 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 PEPDP12955 493 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 ENPP1P22413 925 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 AHCYP23526 432 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 SOX9P48436 509 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 CSTF1Q05048 431 aaKnown RBP16.41■□□□□ 0.22
CHTOP-203ENST00000368690 PLD1Q13393 1074 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 RAB33AQ14088 237 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 GALNT11Q8NCW6 608 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 OR11H4Q8NGC9 324 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 OR4D11Q8NGI4 311 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 ADAMTS19Q8TE59 1207 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 JAM3Q9BX67 310 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 B3GNT4Q9C0J1 378 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 SLC6A16Q9GZN6 736 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 ABCG5Q9H222 651 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 PPA2Q9H2U2 334 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 OR51J1Q9H342 316 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 DPAGT1Q9H3H5 408 aa16.41■□□□□ 0.22
CHTOP-203ENST00000368690 MVB12BQ9H7P6 319 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms