RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 A6NCN8 305 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 AGAP5A6NIR3 686 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 EFCAB9A8MZ26 197 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 P2RX6O15547 441 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 HSMCR30P0CW71 290 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 CD36P16671 472 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 AZGP1P25311 298 aaKnown RBP10.04□□□□□ -0.8
TPM3-212ENST00000368533 CMPK1P30085 196 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 BSGP35613 385 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 KRT20P35900 424 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 MAGEA2P43356 314 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 STARD6P59095 220 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 YPEL5P62699 121 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 BTN3A2P78410 334 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 DAB2P98082 770 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 SPIBQ01892 262 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 RGNQ15493 299 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 DEFB134Q4QY38 66 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 ZC3H12BQ5HYM0 836 aaKnown RBP10.04□□□□□ -0.8
TPM3-212ENST00000368533 CBLL1Q75N03 491 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 OR8H2Q8N162 312 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 METTL27Q8N6F8 245 aaPredicted RBP10.04□□□□□ -0.8
TPM3-212ENST00000368533 GALNT6Q8NCL4 622 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 PHF10Q8WUB8 498 aaKnown RBP10.04□□□□□ -0.8
TPM3-212ENST00000368533 SHDQ96IW2 340 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 FEVQ99581 238 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 YIPF4Q9BSR8 244 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 GSDMCQ9BYG8 508 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 REEP4Q9H6H4 257 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 ACTR10Q9NZ32 417 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 WBP11Q9Y2W2 641 aaKnown RBP10.04□□□□□ -0.8
TPM3-212ENST00000368533 MRPS2Q9Y399 296 aaKnown RBP10.04□□□□□ -0.8
TPM3-212ENST00000368533 HS3ST3A1Q9Y663 406 aa10.04□□□□□ -0.8
TPM3-212ENST00000368533 LRIT2A6NDA9 550 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 METTL12A8MUP2 240 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 FOXE1O00358 373 aaPredicted RBP10.03□□□□□ -0.8
TPM3-212ENST00000368533 ZNF217O75362 1048 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 FURINP09958 794 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 HOXB6P17509 224 aaKnown RBP10.03□□□□□ -0.8
TPM3-212ENST00000368533 PRPH2P23942 346 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 POU1F1P28069 291 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 FEN1P39748 380 aaKnown RBP10.03□□□□□ -0.8
TPM3-212ENST00000368533 ASMTP46597 345 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 DHPSP49366 369 aaPredicted RBP10.03□□□□□ -0.8
TPM3-212ENST00000368533 LRRC74AQ0VAA2 488 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 SNTA1Q13424 505 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 TP53BP2Q13625 1128 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 IRF3Q14653 427 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 MAD2L1BPQ15013 274 aaPredicted RBP10.03□□□□□ -0.8
TPM3-212ENST00000368533 TAB1Q15750 504 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 WDR53Q7Z5U6 358 aaPredicted RBP10.03□□□□□ -0.8
TPM3-212ENST00000368533 OR2I1PQ8NGU4 316 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 POP5Q969H6 163 aaKnown RBP10.03□□□□□ -0.8
TPM3-212ENST00000368533 COL26A1Q96A83 441 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 WDR34Q96EX3 536 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 OR2A14Q96R47 310 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 COPS4Q9BT78 406 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 ATP13A2Q9NQ11 1180 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 WASH6PQ9NQA3 447 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 TAS2R9Q9NYW1 312 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 EHD3Q9NZN3 535 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 CACNA1EQ15878 2313 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 A0A1B0GVT2 93 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 SMLR1H3BR10 107 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 M0R129 80 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 PGRMC2O15173 223 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 PCDHGA12O60330 932 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 PRMT3O60678 531 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 IL1RNP18510 177 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 SLC35A2P78381 396 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 AMZ1Q400G9 498 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 ZNF404Q494X3 552 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 ANXA8L1Q5VT79 327 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 ZNF544Q6NX49 715 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 TNFAIP8L2Q6P589 184 aaPredicted RBP10.03□□□□□ -0.8
TPM3-212ENST00000368533 TSPYL5Q86VY4 417 aaPredicted RBP10.03□□□□□ -0.8
TPM3-212ENST00000368533 LACC1Q8IV20 430 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 OR8J2Q8NGG1 315 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 CREB3L4Q8TEY5 395 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 CHAC2Q8WUX2 184 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 UBE2E3Q969T4 207 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 MAGEB10Q96LZ2 347 aaPredicted RBP10.03□□□□□ -0.8
TPM3-212ENST00000368533 SLC35A5Q9BS91 424 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 NUAK2Q9H093 628 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 IMPAD1Q9NX62 359 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 RAB23Q9ULC3 237 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 ATG4BQ9Y4P1 393 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 PCDHGB3Q9Y5G1 929 aa10.03□□□□□ -0.8
TPM3-212ENST00000368533 OR2W5A6NFC9 320 aa10.02□□□□□ -0.8
TPM3-212ENST00000368533 B8ZZF3 427 aa10.02□□□□□ -0.8
TPM3-212ENST00000368533 TLR4O00206 839 aa10.02□□□□□ -0.8
TPM3-212ENST00000368533 PRICKLE3O43900 615 aaPredicted RBP10.02□□□□□ -0.8
TPM3-212ENST00000368533 TSC22D2O75157 780 aa10.02□□□□□ -0.8
TPM3-212ENST00000368533 ZNF888P0CJ79 500 aaPredicted RBP10.02□□□□□ -0.8
TPM3-212ENST00000368533 HSD3B1P14060 373 aa10.02□□□□□ -0.8
TPM3-212ENST00000368533 HSD3B2P26439 372 aa10.02□□□□□ -0.8
TPM3-212ENST00000368533 C21orf33P30042 268 aaPredicted RBP10.02□□□□□ -0.8
TPM3-212ENST00000368533 PIK3CBP42338 1070 aa10.02□□□□□ -0.8
TPM3-212ENST00000368533 CCR5P51681 352 aa10.02□□□□□ -0.8
TPM3-212ENST00000368533 ZIC1Q15915 447 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms