RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 RD3Q7Z3Z2 195 aa17■□□□□ 0.31
UBQLN4-201ENST00000368309 DOK4Q8TEW6 326 aa17■□□□□ 0.31
UBQLN4-201ENST00000368309 SMURF1Q9HCE7 757 aa17■□□□□ 0.31
UBQLN4-201ENST00000368309 SEC14L4Q9UDX3 406 aa17■□□□□ 0.31
UBQLN4-201ENST00000368309 LINC00854A0A1B0GVQ3 168 aa17■□□□□ 0.31
UBQLN4-201ENST00000368309 CACNB4O00305 520 aaPredicted RBP17■□□□□ 0.31
UBQLN4-201ENST00000368309 CH25HO95992 272 aa17■□□□□ 0.31
UBQLN4-201ENST00000368309 APODP05090 189 aa17■□□□□ 0.31
UBQLN4-201ENST00000368309 CDK5Q00535 292 aa17■□□□□ 0.31
UBQLN4-201ENST00000368309 ALDH6A1Q02252 535 aaKnown RBP17■□□□□ 0.31
UBQLN4-201ENST00000368309 FLYWCH1Q4VC44 716 aa17■□□□□ 0.31
UBQLN4-201ENST00000368309 CELF2-AS1Q8N7Q2 184 aa17■□□□□ 0.31
UBQLN4-201ENST00000368309 OR9Q1Q8NGQ5 310 aa17■□□□□ 0.31
UBQLN4-201ENST00000368309 TIMM29Q9BSF4 260 aa17■□□□□ 0.31
UBQLN4-201ENST00000368309 SLC38A1Q9H2H9 487 aa17■□□□□ 0.31
UBQLN4-201ENST00000368309 STUB1Q9UNE7 303 aa17■□□□□ 0.31
UBQLN4-201ENST00000368309 SPTBN5Q9NRC6 3674 aaKnown RBP17■□□□□ 0.31
UBQLN4-201ENST00000368309 TBC1D3DA0A087WVF3 549 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 TBC1D3IA0A087WXS9 549 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 TBC1D3EA0A087X179 549 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 TBC1D3KA0A087X1G2 549 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 A0A0G2JPF8 293 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 TBC1D3FA6NER0 549 aaPredicted RBP16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 HNRNPCL2B2RXH8 293 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 GPR89AB7ZAQ6 455 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 HNRNPCL3B7ZW38 293 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 TBC1D3LB9A6J9 549 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 EML2O95834 649 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 TBC1D3HP0C7X1 549 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 GPR89BP0CG08 455 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 HNRNPCL4P0DMR1 293 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 F3P13726 295 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 GDI1P31150 447 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 MPIP34949 423 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 IGFALSP35858 605 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 RPS21P63220 83 aaKnown RBP16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 TGM3Q08188 693 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 TJAP1Q5JTD0 557 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 C6orf132Q5T0Z8 1188 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 TBC1D3GQ6DHY5 549 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 TBC1D3CQ6IPX1 549 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 TBC1D3Q8IZP1 549 aaPredicted RBP16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 SIMC1Q8NDZ2 872 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 ARMC5Q96C12 935 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 ELP4Q96EB1 424 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 SAP130Q9H0E3 1048 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 SFXN1Q9H9B4 322 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 CRNNQ9UBG3 495 aaPredicted RBP16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 MUTYHQ9UIF7 546 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 SLC13A4Q9UKG4 626 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 SSR3Q9UNL2 185 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 PCDHGA4Q9Y5G9 962 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 SPIN1Q9Y657 262 aaPredicted RBP16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 CDRT1O95170 752 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 PTTG1O95997 202 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 ADH1BP00325 375 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 AZGP1P25311 298 aaKnown RBP16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 MADCAM1Q13477 382 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 FBXO46Q6PJ61 603 aaPredicted RBP16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 TMEM64Q6YI46 380 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 NCCRP1Q6ZVX7 275 aaPredicted RBP16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 LAX1Q8IWV1 398 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 GATAD2BQ8WXI9 593 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 FAM46AQ96IP4 442 aaKnown RBP16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 C1QTNF2Q9BXJ5 285 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 FGF22Q9HCT0 170 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 SEMA4GQ9NTN9 838 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 NDUFB11Q9NX14 153 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 IL20RAQ9UHF4 553 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 SLC17A4Q9Y2C5 497 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 MDC1Q14676 2089 aaKnown RBP16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 PROM1O43490 865 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 CLEC2LP0C7M8 214 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 TRHRP34981 398 aaPredicted RBP16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 MAGEA10P43363 369 aaPredicted RBP16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 RORCP51449 518 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 SMSP52788 366 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 PRR5P85299 388 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 C22orf42Q6IC83 251 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 CD300LDQ6UXZ3 194 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 UTS2BQ765I0 119 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 TRIM69Q86WT6 500 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 OR8D4Q8NGM9 314 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 PINK1Q9BXM7 581 aa16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 TESQ9UGI8 421 aaKnown RBP16.99■□□□□ 0.31
UBQLN4-201ENST00000368309 KNL1Q8NG31 2342 aa16.98■□□□□ 0.31
UBQLN4-201ENST00000368309 FAM170BA6NMN3 283 aa16.98■□□□□ 0.31
UBQLN4-201ENST00000368309 AGRPO00253 132 aa16.98■□□□□ 0.31
UBQLN4-201ENST00000368309 RAB36O95755 333 aa16.98■□□□□ 0.31
UBQLN4-201ENST00000368309 AK4P27144 223 aaPredicted RBP16.98■□□□□ 0.31
UBQLN4-201ENST00000368309 ATAD3BQ5T9A4 648 aa16.98■□□□□ 0.31
UBQLN4-201ENST00000368309 ZNF730Q6ZMV8 503 aa16.98■□□□□ 0.31
UBQLN4-201ENST00000368309 OR4N5Q8IXE1 308 aa16.98■□□□□ 0.31
UBQLN4-201ENST00000368309 OR56A1Q8NGH5 318 aa16.98■□□□□ 0.31
UBQLN4-201ENST00000368309 APOOQ9BUR5 198 aa16.98■□□□□ 0.31
UBQLN4-201ENST00000368309 DIMT1Q9UNQ2 313 aaKnown RBP16.98■□□□□ 0.31
UBQLN4-201ENST00000368309 RBMX2Q9Y388 322 aaKnown RBP16.98■□□□□ 0.31
UBQLN4-201ENST00000368309 CHST2Q9Y4C5 530 aa16.98■□□□□ 0.31
UBQLN4-201ENST00000368309 C2orf16Q68DN1 1984 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms