RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 ENTHD1Q8IYW4 607 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 LILRA3Q8N6C8 439 aaPredicted RBP11.06□□□□□ -0.64
COPA-202ENST00000368069 S100A16Q96FQ6 103 aaKnown RBP11.06□□□□□ -0.64
COPA-202ENST00000368069 ZIC5Q96T25 663 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 B3GNT4Q9C0J1 378 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 TP63Q9H3D4 680 aaPredicted RBP11.06□□□□□ -0.64
COPA-202ENST00000368069 FAM155AB1AL88 458 aaPredicted RBP11.06□□□□□ -0.64
COPA-202ENST00000368069 KLK8O60259 260 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 KRT33AO76009 404 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 PEX11BO96011 259 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 IL1RNP18510 177 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 ARPC4P59998 168 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 PFN3P60673 137 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 RPL6Q02878 288 aaKnown RBP11.06□□□□□ -0.64
COPA-202ENST00000368069 GFOD2Q3B7J2 385 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 HSD17B12Q53GQ0 312 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 COX20Q5RI15 118 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 BHLHA9Q7RTU4 235 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 LIMS2Q7Z4I7 341 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 CPOQ8IVL8 374 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 GDPD1Q8N9F7 314 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 OR8K3Q8NH51 312 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 SLC17A9Q9BYT1 436 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 MMP28Q9H239 520 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 MTHFD2LQ9H903 347 aaPredicted RBP11.06□□□□□ -0.64
COPA-202ENST00000368069 CENPMQ9NSP4 180 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 CLDND1Q9NY35 253 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 GRHPRQ9UBQ7 328 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 PSORS1C1Q9UIG5 152 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 MYO10Q9HD67 2058 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 CTDSP2O14595 271 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 PRODHO43272 600 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 PRKYO43930 277 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 TRIM3O75382 744 aaPredicted RBP11.06□□□□□ -0.64
COPA-202ENST00000368069 GABARAPO95166 117 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 CSTAP01040 98 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 DBIP07108 87 aaKnown RBP11.06□□□□□ -0.64
COPA-202ENST00000368069 GPX2P18283 190 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 C5AR1P21730 350 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 HOXC5Q00444 222 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 CCSMST1Q4G0I0 132 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 CCDC36Q8IYA8 594 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 CEP76Q8TAP6 659 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 C15orf40Q8WUR7 153 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 TSACCQ96A04 125 aaPredicted RBP11.06□□□□□ -0.64
COPA-202ENST00000368069 HRASLS5Q96KN8 279 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 PINK1Q9BXM7 581 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 POLDIP3Q9BY77 421 aaKnown RBP11.06□□□□□ -0.64
COPA-202ENST00000368069 MED11Q9P086 117 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 CSNK1G3Q9Y6M4 447 aa11.06□□□□□ -0.64
COPA-202ENST00000368069 TRBV4-1A0A0J9YWV2 114 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 FOXE1O00358 373 aaPredicted RBP11.05□□□□□ -0.64
COPA-202ENST00000368069 ABLIM3O94929 683 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 B3GALT4O96024 378 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 PTHP01270 115 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 GASTP01350 101 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 ZDHHC11BP0C7U3 371 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 LHCGRP22888 699 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 SSTR4P31391 388 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 ANKRD34AQ69YU3 496 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 XKRXQ6PP77 449 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 ZNF227Q86WZ6 799 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 NLGN4XQ8N0W4 816 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 PRRC1Q96M27 445 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 MBOAT4Q96T53 435 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 TMEM121BQ9BXQ6 578 aaPredicted RBP11.05□□□□□ -0.64
COPA-202ENST00000368069 OR8D2Q9GZM6 311 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 SFXN1Q9H9B4 322 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 SLC25A37Q9NYZ2 338 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 ANKMY1Q9P2S6 941 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 LAMP5Q9UJQ1 280 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 GPR34Q9UPC5 381 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 TRAPPC13A5PLN9 417 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 ANTXRLA6NF34 631 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 TSPAN9O75954 239 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 AK4P27144 223 aaPredicted RBP11.05□□□□□ -0.64
COPA-202ENST00000368069 ISL1P61371 349 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 ZNF91Q05481 1191 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 PIAS4Q8N2W9 510 aaPredicted RBP11.05□□□□□ -0.64
COPA-202ENST00000368069 CSNK1A1LQ8N752 337 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 ACOT4Q8N9L9 421 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 ZNF740Q8NDX6 193 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 HCAR2Q8TDS4 363 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 BADQ92934 168 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 UBE2FQ969M7 185 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 DPH1Q9BZG8 443 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 IKZF5Q9H5V7 419 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 LTB4R2Q9NPC1 389 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 PRTFDC1Q9NRG1 225 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 TAS2R16Q9NYV7 291 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 GPN3Q9UHW5 284 aaPredicted RBP11.05□□□□□ -0.64
COPA-202ENST00000368069 C12orf71A8MTZ7 269 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 I3L521 148 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 MAPK3P27361 379 aaPredicted RBP11.05□□□□□ -0.64
COPA-202ENST00000368069 TSPAN5P62079 268 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 SHC2P98077 582 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 CDK3Q00526 305 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 ARHGAP19Q14CB8 494 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 SEC23BQ15437 767 aa11.05□□□□□ -0.64
COPA-202ENST00000368069 CTU2Q2VPK5 515 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms